RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 COX7B2Q8TF08 81 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 IGLV5-39A0A0G2JS06 123 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 NDUFA1O15239 70 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 HERV-K104P63124 156 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 COL5A1-AS1Q5SY13 56 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 C10orf126Q8N4M7 172 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 ORAOV1Q8WV07 137 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 COPS9Q8WXC6 57 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 RMI2Q96E14 147 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 SNHG12Q9BXW3 62 aa5.5□□□□□ -1.53
HTT-209ENST00000512068 TENM3Q9P273 2699 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 IGHV3OR16-9A0A0B4J2B5 98 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 CKS1BP61024 79 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 C6orf226Q5I0X4 101 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 BVES-AS1Q5T3Y7 98 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 CEND1Q8N111 149 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 Q9H8V8 135 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 PRR34Q9NV39 138 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 LINC00588Q9Y4M8 146 aa5.49□□□□□ -1.53
HTT-209ENST00000512068 A0A0J9YXY3 114 aa5.48□□□□□ -1.53
HTT-209ENST00000512068 DNAH10OSP0CZ25 163 aa5.48□□□□□ -1.53
HTT-209ENST00000512068 CXCL5P42830 114 aa5.48□□□□□ -1.53
HTT-209ENST00000512068 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
HTT-209ENST00000512068 Q8N1X5 172 aa5.48□□□□□ -1.53
HTT-209ENST00000512068 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
HTT-209ENST00000512068 SPANXB1Q9NS25 103 aaPredicted RBP5.48□□□□□ -1.53
HTT-209ENST00000512068 IGKV2D-24A0A075B6R9 120 aa5.47□□□□□ -1.53
HTT-209ENST00000512068 TIMM17BO60830 172 aa5.47□□□□□ -1.53
HTT-209ENST00000512068 RPL24P83731 157 aaKnown RBP5.47□□□□□ -1.53
HTT-209ENST00000512068 ENHOQ6UWT2 76 aa5.47□□□□□ -1.53
HTT-209ENST00000512068 Q6ZVH6 145 aa5.47□□□□□ -1.53
HTT-209ENST00000512068 Q8IZM0 81 aa5.47□□□□□ -1.53
HTT-209ENST00000512068 K7EP13 123 aa5.46□□□□□ -1.54
HTT-209ENST00000512068 SPAG11BQ08648 103 aa5.46□□□□□ -1.54
HTT-209ENST00000512068 FOXI1Q12951 378 aa5.46□□□□□ -1.54
HTT-209ENST00000512068 LINC00476Q8WZB0 136 aa5.46□□□□□ -1.54
HTT-209ENST00000512068 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.54
HTT-209ENST00000512068 Q9HAA7 133 aa5.46□□□□□ -1.54
HTT-209ENST00000512068 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
HTT-209ENST00000512068 SMIM13P0DJ93 91 aa5.45□□□□□ -1.54
HTT-209ENST00000512068 TM2D2Q9BX73 214 aa5.45□□□□□ -1.54
HTT-209ENST00000512068 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
HTT-209ENST00000512068 NHP2Q9NX24 153 aaKnown RBP5.45□□□□□ -1.54
HTT-209ENST00000512068 SPANXCQ9NY87 97 aa5.45□□□□□ -1.54
HTT-209ENST00000512068 COX11Q9Y6N1 276 aa5.45□□□□□ -1.54
HTT-209ENST00000512068 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.44□□□□□ -1.54
HTT-209ENST00000512068 IBA57-AS1B1ANH7 110 aa5.44□□□□□ -1.54
HTT-209ENST00000512068 IFITM1P13164 125 aa5.44□□□□□ -1.54
HTT-209ENST00000512068 FXYD2P54710 66 aa5.44□□□□□ -1.54
HTT-209ENST00000512068 LINC00158P58513 81 aa5.44□□□□□ -1.54
HTT-209ENST00000512068 TTC32Q5I0X7 151 aa5.44□□□□□ -1.54
HTT-209ENST00000512068 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
HTT-209ENST00000512068 A0A0U1RRA0 63 aa5.43□□□□□ -1.54
HTT-209ENST00000512068 RAB37Q96AX2 223 aa5.43□□□□□ -1.54
HTT-209ENST00000512068 HUWE1Q7Z6Z7 4374 aaKnown RBP5.42□□□□□ -1.54
HTT-209ENST00000512068 PSCAO43653 123 aa5.42□□□□□ -1.54
HTT-209ENST00000512068 NPC2P61916 151 aa5.42□□□□□ -1.54
HTT-209ENST00000512068 MUSTN1Q8IVN3 82 aa5.42□□□□□ -1.54
HTT-209ENST00000512068 MUC7Q8TAX7 377 aa5.42□□□□□ -1.54
HTT-209ENST00000512068 ERG28Q9UKR5 140 aa5.42□□□□□ -1.54
HTT-209ENST00000512068 PFN2P35080 140 aa5.41□□□□□ -1.54
HTT-209ENST00000512068 COX17Q14061 63 aa5.41□□□□□ -1.54
HTT-209ENST00000512068 CAMK2N2Q96S95 79 aa5.41□□□□□ -1.54
HTT-209ENST00000512068 A0A1B0GV90 55 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 A4D1N5 150 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 F8WDY8 70 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 K7ERJ3 54 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 Q1RN00 199 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 HIGD2BQ4VC39 106 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 ADAMTSL4-AS1Q5T5F5 129 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 C2orf82Q6UX34 121 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 MIR7-3HGQ8N6C7 128 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 DAND5Q8N907 189 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 LINC00308Q8TCZ7 52 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 LITAFQ99732 161 aa5.4□□□□□ -1.54
HTT-209ENST00000512068 A0A0B4J2C4 111 aa5.39□□□□□ -1.55
HTT-209ENST00000512068 TAX1BP3O14907 124 aa5.39□□□□□ -1.55
HTT-209ENST00000512068 VAMP3Q15836 100 aa5.39□□□□□ -1.55
HTT-209ENST00000512068 LYRM7Q5U5X0 104 aa5.39□□□□□ -1.55
HTT-209ENST00000512068 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
HTT-209ENST00000512068 STAB2Q8WWQ8 2551 aa5.39□□□□□ -1.55
HTT-209ENST00000512068 TRBV30A0A0K0K1B3 111 aa5.38□□□□□ -1.55
HTT-209ENST00000512068 H3BUT2 72 aa5.38□□□□□ -1.55
HTT-209ENST00000512068 FABP2P12104 132 aa5.38□□□□□ -1.55
HTT-209ENST00000512068 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
HTT-209ENST00000512068 C14orf177Q52M58 125 aa5.38□□□□□ -1.55
HTT-209ENST00000512068 NTN5Q8WTR8 489 aaPredicted RBP5.38□□□□□ -1.55
HTT-209ENST00000512068 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
HTT-209ENST00000512068 PRO1854Q9UHT4 67 aa5.38□□□□□ -1.55
HTT-209ENST00000512068 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 GVQW2A0A096LPI5 108 aaPredicted RBP5.37□□□□□ -1.55
HTT-209ENST00000512068 NBDYA0A0U1RRE5 68 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 A0A1B0GWB2 263 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 CFC1BP0CG36 223 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 CFC1P0CG37 223 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 PSMB2P49721 201 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 KRTAP26-1Q6PEX3 210 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 UNQ6190/PRO20217Q6UXQ8 127 aa5.37□□□□□ -1.55
HTT-209ENST00000512068 C6orf223Q8N319 242 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms