RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ELOF1P60002 83 aaKnown RBP6.1□□□□□ -1.43
HTT-208ENST00000510626 CRIP2P52943 208 aaPredicted RBP6.1□□□□□ -1.43
HTT-208ENST00000510626 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
HTT-208ENST00000510626 C2orf48Q96LS8 159 aa6.1□□□□□ -1.43
HTT-208ENST00000510626 SHISA2Q6UWI4 295 aa6.1□□□□□ -1.43
HTT-208ENST00000510626 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.43
HTT-208ENST00000510626 C3orf84H3BNL1 204 aa6.09□□□□□ -1.43
HTT-208ENST00000510626 PRM2P04554 102 aa6.09□□□□□ -1.43
HTT-208ENST00000510626 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
HTT-208ENST00000510626 C1orf137Q5JT78 98 aa6.09□□□□□ -1.43
HTT-208ENST00000510626 SERTAD4-AS1Q5TG53 156 aa6.09□□□□□ -1.43
HTT-208ENST00000510626 C7orf33Q8WU49 177 aa6.08□□□□□ -1.44
HTT-208ENST00000510626 J3QKU1 62 aa6.08□□□□□ -1.44
HTT-208ENST00000510626 IGLV5-45A0A087WSX0 123 aa6.08□□□□□ -1.44
HTT-208ENST00000510626 C11orf21Q9P2W6 132 aa6.08□□□□□ -1.44
HTT-208ENST00000510626 IGLV1-40P01703 118 aa6.08□□□□□ -1.44
HTT-208ENST00000510626 URB1-AS1Q96HZ7 61 aa6.08□□□□□ -1.44
HTT-208ENST00000510626 IGLV5-39A0A0G2JS06 123 aa6.08□□□□□ -1.44
HTT-208ENST00000510626 DNAJC9-AS1A6NH13 148 aa6.08□□□□□ -1.44
HTT-208ENST00000510626 MSMPQ1L6U9 139 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 LINC00575Q6W349 94 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 WFDC13Q8IUB5 93 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 CYSRT1A8MQ03 144 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 DEFB1P60022 68 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 C1orf229Q6ZS94 237 aaPredicted RBP6.07□□□□□ -1.44
HTT-208ENST00000510626 ATRQ13535 2644 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 ADORA2A-AS1P86434 159 aa6.07□□□□□ -1.44
HTT-208ENST00000510626 TRAV10A0A0B4J240 114 aa6.06□□□□□ -1.44
HTT-208ENST00000510626 PRR15Q8IV56 129 aa6.06□□□□□ -1.44
HTT-208ENST00000510626 XAGE1AQ9HD64 81 aa6.06□□□□□ -1.44
HTT-208ENST00000510626 ADAMTSL4-AS1Q5T5F5 129 aa6.05□□□□□ -1.44
HTT-208ENST00000510626 GRNP28799 593 aaKnown RBP6.05□□□□□ -1.44
HTT-208ENST00000510626 CENPFP49454 3210 aa6.05□□□□□ -1.44
HTT-208ENST00000510626 Q6ZSV7 163 aa6.05□□□□□ -1.44
HTT-208ENST00000510626 Q6ZVQ6 151 aa6.05□□□□□ -1.44
HTT-208ENST00000510626 DEFB131BA0A096LNP1 70 aa6.05□□□□□ -1.44
HTT-208ENST00000510626 A8MZ25 164 aa6.05□□□□□ -1.44
HTT-208ENST00000510626 A0A096LNJ9 63 aa6.05□□□□□ -1.44
HTT-208ENST00000510626 C22orf34Q6ZV56 151 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 MAPK1IP1LQ8NDC0 245 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 A0A087WYN8 130 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 PRR9Q5T870 116 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 LINC00846Q9NV44 126 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 ACYP2P14621 99 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 HECTD1Q9ULT8 2610 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 TSPEAR-AS2P59090 65 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 SOSTDC1Q6X4U4 206 aa6.04□□□□□ -1.44
HTT-208ENST00000510626 H0Y9P7 68 aa6.03□□□□□ -1.44
HTT-208ENST00000510626 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.03□□□□□ -1.44
HTT-208ENST00000510626 KPRPQ5T749 579 aaPredicted RBP6.03□□□□□ -1.44
HTT-208ENST00000510626 PSPHP1O15172 72 aa6.03□□□□□ -1.44
HTT-208ENST00000510626 RETNLBQ9BQ08 111 aa6.02□□□□□ -1.45
HTT-208ENST00000510626 SPANXA2-OT1Q8N9U9 137 aa6.02□□□□□ -1.45
HTT-208ENST00000510626 Q8N2B8 174 aa6.02□□□□□ -1.45
HTT-208ENST00000510626 C11orf71Q6IPW1 123 aa6.01□□□□□ -1.45
HTT-208ENST00000510626 MGAM2Q2M2H8 2515 aa6.01□□□□□ -1.45
HTT-208ENST00000510626 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
HTT-208ENST00000510626 COL27A1Q8IZC6 1860 aaPredicted RBP6□□□□□ -1.45
HTT-208ENST00000510626 PROK1P58294 105 aa6□□□□□ -1.45
HTT-208ENST00000510626 WISP2O76076 250 aa6□□□□□ -1.45
HTT-208ENST00000510626 C11orf72Q8NBR9 251 aa6□□□□□ -1.45
HTT-208ENST00000510626 IGKV2-24A0A0C4DH68 120 aa5.99□□□□□ -1.45
HTT-208ENST00000510626 LOC100131303A0A0U1RQF7 123 aa5.99□□□□□ -1.45
HTT-208ENST00000510626 ZNF843Q8N446 348 aa5.99□□□□□ -1.45
HTT-208ENST00000510626 Q8NA96 180 aa5.99□□□□□ -1.45
HTT-208ENST00000510626 C1orf64Q8NEQ6 169 aa5.99□□□□□ -1.45
HTT-208ENST00000510626 PRR4Q16378 134 aa5.98□□□□□ -1.45
HTT-208ENST00000510626 A0A087WVE0 104 aa5.98□□□□□ -1.45
HTT-208ENST00000510626 GAS8-AS1O95177 125 aa5.98□□□□□ -1.45
HTT-208ENST00000510626 IGHV4-31P0DP07 118 aa5.98□□□□□ -1.45
HTT-208ENST00000510626 BBC3Q96PG8 261 aaPredicted RBP5.98□□□□□ -1.45
HTT-208ENST00000510626 DEFB4AO15263 64 aa5.98□□□□□ -1.45
HTT-208ENST00000510626 KLK9Q2XQG4 91 aa5.97□□□□□ -1.45
HTT-208ENST00000510626 LINC00337Q8N6G1 96 aa5.97□□□□□ -1.45
HTT-208ENST00000510626 IGKV2-28A0A075B6P5 120 aa5.97□□□□□ -1.45
HTT-208ENST00000510626 IGKV2D-28P01615 120 aa5.97□□□□□ -1.45
HTT-208ENST00000510626 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
HTT-208ENST00000510626 ZNF702PQ9H963 129 aa5.97□□□□□ -1.45
HTT-208ENST00000510626 RPL37AP61513 92 aaKnown RBP5.97□□□□□ -1.45
HTT-208ENST00000510626 LINC00482Q8N8I6 264 aa5.97□□□□□ -1.45
HTT-208ENST00000510626 CENPEQ02224 2701 aa5.97□□□□□ -1.45
HTT-208ENST00000510626 FLNBO75369 2602 aaKnown RBP5.97□□□□□ -1.45
HTT-208ENST00000510626 COX6A2Q02221 97 aa5.96□□□□□ -1.45
HTT-208ENST00000510626 Q9BRP9 147 aa5.96□□□□□ -1.45
HTT-208ENST00000510626 H3BNG1 76 aa5.96□□□□□ -1.46
HTT-208ENST00000510626 UNQ6190/PRO20217Q6UXQ8 127 aa5.96□□□□□ -1.46
HTT-208ENST00000510626 A0A1W2PNU3 283 aaPredicted RBP5.95□□□□□ -1.46
HTT-208ENST00000510626 Q6ZQT0 140 aa5.95□□□□□ -1.46
HTT-208ENST00000510626 C10orf142B7Z368 130 aa5.95□□□□□ -1.46
HTT-208ENST00000510626 COL4A2P08572 1712 aa5.95□□□□□ -1.46
HTT-208ENST00000510626 C7orf65Q6ZTY9 151 aa5.95□□□□□ -1.46
HTT-208ENST00000510626 C4orf26Q17RF5 130 aa5.95□□□□□ -1.46
HTT-208ENST00000510626 SMCPP49901 116 aaPredicted RBP5.95□□□□□ -1.46
HTT-208ENST00000510626 SPATA3Q8NHX4 192 aa5.95□□□□□ -1.46
HTT-208ENST00000510626 TRBV7-4A0A0J9YYF1 115 aa5.94□□□□□ -1.46
HTT-208ENST00000510626 Q1T7F1 81 aa5.94□□□□□ -1.46
HTT-208ENST00000510626 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms