RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
USP38-202ENST00000510377 ENHOQ6UWT2 76 aa10.58□□□□□ -0.72
USP38-202ENST00000510377 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
USP38-202ENST00000510377 C6orf99Q4VX62 202 aa10.58□□□□□ -0.72
USP38-202ENST00000510377 LINC00959A0A1B0GUT2 108 aa10.57□□□□□ -0.72
USP38-202ENST00000510377 FAM222AQ5U5X8 452 aa10.57□□□□□ -0.72
USP38-202ENST00000510377 COX7CP15954 63 aa10.57□□□□□ -0.72
USP38-202ENST00000510377 RPL28P46779 137 aaKnown RBP10.57□□□□□ -0.72
USP38-202ENST00000510377 USP17L23D6RBM5 183 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 C20orf197Q8N268 126 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 SHISA2Q6UWI4 295 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 KLK12Q9UKR0 248 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 JMJD7-PLA2G4BH0Y9G9 81 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 SPAG11BQ08648 103 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 C9orf116Q5BN46 136 aaPredicted RBP10.56□□□□□ -0.72
USP38-202ENST00000510377 BAHCC1Q9P281 2608 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 LOC107984640A0A0U1RRK4 108 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 ZNF561-AS1K7EIQ3 104 aa10.56□□□□□ -0.72
USP38-202ENST00000510377 LINC00482Q8N8I6 264 aa10.55□□□□□ -0.72
USP38-202ENST00000510377 PRO0255Q9UI72 69 aa10.55□□□□□ -0.72
USP38-202ENST00000510377 GCN1Q92616 2671 aaKnown RBP10.55□□□□□ -0.72
USP38-202ENST00000510377 TRBV7-7A0A0K0K1E9 115 aa10.55□□□□□ -0.72
USP38-202ENST00000510377 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
USP38-202ENST00000510377 LINC00846Q9NV44 126 aa10.54□□□□□ -0.72
USP38-202ENST00000510377 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
USP38-202ENST00000510377 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
USP38-202ENST00000510377 RBM3P98179 157 aaKnown RBP10.54□□□□□ -0.72
USP38-202ENST00000510377 XAGE1AQ9HD64 81 aa10.53□□□□□ -0.72
USP38-202ENST00000510377 ITPR1Q14643 2758 aa10.53□□□□□ -0.72
USP38-202ENST00000510377 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
USP38-202ENST00000510377 SMCR5Q8TEV8 140 aa10.53□□□□□ -0.72
USP38-202ENST00000510377 PPDPFQ9H3Y8 114 aa10.53□□□□□ -0.72
USP38-202ENST00000510377 CSDC2Q9Y534 153 aaKnown RBP10.53□□□□□ -0.72
USP38-202ENST00000510377 UNC79Q9P2D8 2635 aa10.53□□□□□ -0.72
USP38-202ENST00000510377 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.72
USP38-202ENST00000510377 DCHS2Q6V1P9 2916 aa10.52□□□□□ -0.73
USP38-202ENST00000510377 REG3AQ06141 175 aa10.52□□□□□ -0.73
USP38-202ENST00000510377 DEFB105AQ8NG35 78 aa10.52□□□□□ -0.73
USP38-202ENST00000510377 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
USP38-202ENST00000510377 LINC01006Q8NI28 216 aa10.51□□□□□ -0.73
USP38-202ENST00000510377 SERP2Q8N6R1 65 aa10.5□□□□□ -0.73
USP38-202ENST00000510377 A0A087WZ39 114 aa10.49□□□□□ -0.73
USP38-202ENST00000510377 A8MTW9 85 aa10.49□□□□□ -0.73
USP38-202ENST00000510377 STAB1Q9NY15 2570 aa10.49□□□□□ -0.73
USP38-202ENST00000510377 HIGD2BQ4VC39 106 aa10.48□□□□□ -0.73
USP38-202ENST00000510377 HILS1P60008 231 aa10.48□□□□□ -0.73
USP38-202ENST00000510377 FHL2Q14192 279 aa10.48□□□□□ -0.73
USP38-202ENST00000510377 FAM110AQ9BQ89 295 aa10.48□□□□□ -0.73
USP38-202ENST00000510377 FAM104AQ969W3 186 aa10.48□□□□□ -0.73
USP38-202ENST00000510377 SVIPQ8NHG7 77 aa10.47□□□□□ -0.73
USP38-202ENST00000510377 CAMK2N2Q96S95 79 aa10.47□□□□□ -0.73
USP38-202ENST00000510377 ZANQ9Y493 2812 aa10.47□□□□□ -0.73
USP38-202ENST00000510377 IGHV3OR16-9A0A0B4J2B5 98 aa10.46□□□□□ -0.73
USP38-202ENST00000510377 IGKV2-28A0A075B6P5 120 aa10.46□□□□□ -0.74
USP38-202ENST00000510377 IGKV2D-28P01615 120 aa10.46□□□□□ -0.74
USP38-202ENST00000510377 Q6ZQY7 126 aa10.46□□□□□ -0.74
USP38-202ENST00000510377 Q6JHZ5 121 aa10.46□□□□□ -0.74
USP38-202ENST00000510377 FAM19A1Q7Z5A9 133 aa10.46□□□□□ -0.74
USP38-202ENST00000510377 IGHV4-28A0A0C4DH34 117 aa10.45□□□□□ -0.74
USP38-202ENST00000510377 APOC4P55056 127 aa10.44□□□□□ -0.74
USP38-202ENST00000510377 UNQ6190/PRO20217Q6UXQ8 127 aa10.44□□□□□ -0.74
USP38-202ENST00000510377 NBEAL2Q6ZNJ1 2754 aa10.44□□□□□ -0.74
USP38-202ENST00000510377 TEX15Q9BXT5 2789 aa10.43□□□□□ -0.74
USP38-202ENST00000510377 DIRC1Q969H9 104 aa10.43□□□□□ -0.74
USP38-202ENST00000510377 Q8N814 137 aa10.43□□□□□ -0.74
USP38-202ENST00000510377 CCKP06307 115 aa10.42□□□□□ -0.74
USP38-202ENST00000510377 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
USP38-202ENST00000510377 SNURFQ9Y675 71 aa10.42□□□□□ -0.74
USP38-202ENST00000510377 Q8IZM0 81 aa10.42□□□□□ -0.74
USP38-202ENST00000510377 SVEP1Q4LDE5 3571 aa10.42□□□□□ -0.74
USP38-202ENST00000510377 IGKV2D-24A0A075B6R9 120 aa10.42□□□□□ -0.74
USP38-202ENST00000510377 C9orf66Q5T8R8 295 aa10.42□□□□□ -0.74
USP38-202ENST00000510377 NKAPP1Q8N9T2 125 aa10.41□□□□□ -0.74
USP38-202ENST00000510377 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
USP38-202ENST00000510377 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
USP38-202ENST00000510377 C6orf223Q8N319 242 aa10.41□□□□□ -0.74
USP38-202ENST00000510377 C9orf129Q5T035 196 aaKnown RBP10.4□□□□□ -0.74
USP38-202ENST00000510377 COL6A5A8TX70 2615 aa10.4□□□□□ -0.74
USP38-202ENST00000510377 IGLV1-51P01701 117 aa10.39□□□□□ -0.75
USP38-202ENST00000510377 Q8N3U1 123 aa10.39□□□□□ -0.75
USP38-202ENST00000510377 COX7BP24311 80 aa10.38□□□□□ -0.75
USP38-202ENST00000510377 TMEM258P61165 79 aa10.38□□□□□ -0.75
USP38-202ENST00000510377 CYSRT1A8MQ03 144 aa10.38□□□□□ -0.75
USP38-202ENST00000510377 KIR2DL5BQ8NHK3 375 aa10.37□□□□□ -0.75
USP38-202ENST00000510377 NREPQ16612 68 aa10.36□□□□□ -0.75
USP38-202ENST00000510377 PRB2P02812 416 aaPredicted RBP10.35□□□□□ -0.75
USP38-202ENST00000510377 FAM236DA0A1B0GTK5 79 aa10.35□□□□□ -0.75
USP38-202ENST00000510377 FAM236CP0DP71 79 aa10.35□□□□□ -0.75
USP38-202ENST00000510377 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
USP38-202ENST00000510377 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
USP38-202ENST00000510377 SPENQ96T58 3664 aaKnown RBP10.35□□□□□ -0.75
USP38-202ENST00000510377 ITPR2Q14571 2701 aa10.35□□□□□ -0.75
USP38-202ENST00000510377 ATP5EP2Q5VTU8 51 aa10.35□□□□□ -0.75
USP38-202ENST00000510377 HRCT1Q6UXD1 115 aa10.34□□□□□ -0.75
USP38-202ENST00000510377 CELSR1Q9NYQ6 3014 aa10.34□□□□□ -0.75
USP38-202ENST00000510377 UBE2DNLQ8IWF7 75 aa10.34□□□□□ -0.75
USP38-202ENST00000510377 TRBV10-3A0A0K0K1G6 114 aa10.33□□□□□ -0.76
USP38-202ENST00000510377 LYRM9A8MSI8 78 aa10.32□□□□□ -0.76
USP38-202ENST00000510377 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
USP38-202ENST00000510377 C5orf47Q569G3 176 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms