RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 A0A0G2JMZ2 1700 aa0.89□□□□□ -2.27
DHFR-204ENST00000508282 KIF14Q15058 1648 aa0.89□□□□□ -2.27
DHFR-204ENST00000508282 MAP3K4Q9Y6R4 1608 aa0.89□□□□□ -2.27
DHFR-204ENST00000508282 TP53AIP1Q9HCN2 124 aa0.88□□□□□ -2.27
DHFR-204ENST00000508282 CUX1P39880 1505 aa0.88□□□□□ -2.27
DHFR-204ENST00000508282 TTC28Q96AY4 2481 aa0.88□□□□□ -2.27
DHFR-204ENST00000508282 GOLGA4Q13439 2230 aaKnown RBP0.87□□□□□ -2.27
DHFR-204ENST00000508282 PAPPAQ13219 1627 aa0.87□□□□□ -2.27
DHFR-204ENST00000508282 HMGN2P05204 90 aaKnown RBP0.87□□□□□ -2.27
DHFR-204ENST00000508282 PLCE1Q9P212 2302 aa0.87□□□□□ -2.27
DHFR-204ENST00000508282 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
DHFR-204ENST00000508282 MEGF8Q7Z7M0 2845 aa0.86□□□□□ -2.27
DHFR-204ENST00000508282 TRBV7-4A0A0J9YYF1 115 aa0.86□□□□□ -2.27
DHFR-204ENST00000508282 PIGYQ3MUY2 71 aa0.86□□□□□ -2.27
DHFR-204ENST00000508282 C6orf201Q7Z4U5 140 aa0.86□□□□□ -2.27
DHFR-204ENST00000508282 A0A1B0GU69 56 aa0.85□□□□□ -2.27
DHFR-204ENST00000508282 FBN2P35556 2912 aa0.85□□□□□ -2.27
DHFR-204ENST00000508282 SNRPFP62306 86 aaKnown RBP0.85□□□□□ -2.27
DHFR-204ENST00000508282 MAGI2Q86UL8 1455 aa0.85□□□□□ -2.27
DHFR-204ENST00000508282 TULP4Q9NRJ4 1543 aa0.84□□□□□ -2.27
DHFR-204ENST00000508282 PKD1L3Q7Z443 1732 aa0.84□□□□□ -2.27
DHFR-204ENST00000508282 I3L2K1 104 aa0.84□□□□□ -2.27
DHFR-204ENST00000508282 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
DHFR-204ENST00000508282 Q8IZM0 81 aa0.84□□□□□ -2.27
DHFR-204ENST00000508282 ARHGAP35Q9NRY4 1499 aa0.84□□□□□ -2.28
DHFR-204ENST00000508282 SETBP1Q9Y6X0 1596 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 NOTCH1P46531 2555 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 NHSL1Q5SYE7 1610 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 BIVM-ERCC5R4GMW8 1640 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 KIF20BQ96Q89 1820 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 LINC00959A0A1B0GUT2 108 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 TDRG1Q3Y452 100 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 S100A13Q99584 98 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 NEXMIFQ5QGS0 1516 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 POLQO75417 2590 aa0.83□□□□□ -2.28
DHFR-204ENST00000508282 FXYD6-FXYD2A0A087WZ82 144 aa0.82□□□□□ -2.28
DHFR-204ENST00000508282 NMSQ5H8A3 153 aa0.82□□□□□ -2.28
DHFR-204ENST00000508282 UBE2D4Q9Y2X8 147 aa0.82□□□□□ -2.28
DHFR-204ENST00000508282 DOPEY2Q9Y3R5 2298 aa0.82□□□□□ -2.28
DHFR-204ENST00000508282 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
DHFR-204ENST00000508282 F8P00451 2351 aa0.82□□□□□ -2.28
DHFR-204ENST00000508282 ALKQ9UM73 1620 aa0.82□□□□□ -2.28
DHFR-204ENST00000508282 ANKRD17O75179 2603 aaKnown RBP0.81□□□□□ -2.28
DHFR-204ENST00000508282 KANTRA0A1W2PQU2 76 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 IQCF6A8MYZ5 107 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 ACYP1P07311 99 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 SPINK6Q6UWN8 80 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 LINC00643Q86TS7 51 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 SAMD9Q5K651 1589 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 KIAA0556O60303 1618 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 BDP1A6H8Y1 2624 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 C2CD3Q4AC94 2353 aa0.81□□□□□ -2.28
DHFR-204ENST00000508282 MYMXA0A1B0GTQ4 84 aa0.8□□□□□ -2.28
DHFR-204ENST00000508282 PLGLAQ15195 96 aa0.8□□□□□ -2.28
DHFR-204ENST00000508282 SPTBN2O15020 2390 aa0.8□□□□□ -2.28
DHFR-204ENST00000508282 ABCA12Q86UK0 2595 aa0.8□□□□□ -2.28
DHFR-204ENST00000508282 TMEM131LA2VDJ0 1609 aa0.79□□□□□ -2.28
DHFR-204ENST00000508282 LRRC37AA6NMS7 1700 aa0.79□□□□□ -2.28
DHFR-204ENST00000508282 ADIRFQ15847 76 aa0.79□□□□□ -2.28
DHFR-204ENST00000508282 DEFB123Q8N688 67 aa0.79□□□□□ -2.28
DHFR-204ENST00000508282 ST20Q9HBF5 79 aa0.79□□□□□ -2.28
DHFR-204ENST00000508282 CCDC141Q6ZP82 1450 aa0.79□□□□□ -2.28
DHFR-204ENST00000508282 APCP25054 2843 aa0.78□□□□□ -2.28
DHFR-204ENST00000508282 IGLC2P0DOY2 106 aa0.78□□□□□ -2.28
DHFR-204ENST00000508282 IGLC3P0DOY3 106 aa0.78□□□□□ -2.28
DHFR-204ENST00000508282 WFDC2Q14508 124 aa0.78□□□□□ -2.28
DHFR-204ENST00000508282 CACNA1EQ15878 2313 aa0.78□□□□□ -2.28
DHFR-204ENST00000508282 ERVK-7P63135 1459 aa0.78□□□□□ -2.28
DHFR-204ENST00000508282 DCAF1Q9Y4B6 1507 aa0.78□□□□□ -2.28
DHFR-204ENST00000508282 USF3Q68DE3 2245 aa0.77□□□□□ -2.29
DHFR-204ENST00000508282 URB1O60287 2271 aaKnown RBP0.77□□□□□ -2.29
DHFR-204ENST00000508282 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
DHFR-204ENST00000508282 USMG5Q96IX5 58 aa0.77□□□□□ -2.29
DHFR-204ENST00000508282 LRRC9Q6ZRR7 1453 aa0.77□□□□□ -2.29
DHFR-204ENST00000508282 DIP2BQ9P265 1576 aa0.77□□□□□ -2.29
DHFR-204ENST00000508282 COL14A1Q05707 1796 aaKnown RBP0.77□□□□□ -2.29
DHFR-204ENST00000508282 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
DHFR-204ENST00000508282 ATP7BP35670 1465 aa0.76□□□□□ -2.29
DHFR-204ENST00000508282 MACF1Q9UPN3 7388 aaKnown RBP0.76□□□□□ -2.29
DHFR-204ENST00000508282 A0A1B0GUT8 65 aa0.76□□□□□ -2.29
DHFR-204ENST00000508282 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
DHFR-204ENST00000508282 TNCP24821 2201 aa0.76□□□□□ -2.29
DHFR-204ENST00000508282 TPRP12270 2363 aaKnown RBP0.75□□□□□ -2.29
DHFR-204ENST00000508282 CEBPZOSA8MTT3 80 aa0.75□□□□□ -2.29
DHFR-204ENST00000508282 PRH1P02810 166 aa0.75□□□□□ -2.29
DHFR-204ENST00000508282 COX6B1P14854 86 aa0.75□□□□□ -2.29
DHFR-204ENST00000508282 DEFB112Q30KQ8 113 aa0.75□□□□□ -2.29
DHFR-204ENST00000508282 UNC79Q9P2D8 2635 aa0.75□□□□□ -2.29
DHFR-204ENST00000508282 SLIT1O75093 1534 aa0.74□□□□□ -2.29
DHFR-204ENST00000508282 TSC2P49815 1807 aa0.74□□□□□ -2.29
DHFR-204ENST00000508282 K7EQZ3 153 aa0.74□□□□□ -2.29
DHFR-204ENST00000508282 UBR3Q6ZT12 1888 aa0.73□□□□□ -2.29
DHFR-204ENST00000508282 PIEZO1Q92508 2521 aa0.73□□□□□ -2.29
DHFR-204ENST00000508282 Q5BKY6 102 aa0.73□□□□□ -2.29
DHFR-204ENST00000508282 SMR3AQ99954 134 aa0.73□□□□□ -2.29
DHFR-204ENST00000508282 ZNF292O60281 2723 aa0.73□□□□□ -2.29
DHFR-204ENST00000508282 ANK2Q01484 3957 aa0.73□□□□□ -2.29
DHFR-204ENST00000508282 CELSR2Q9HCU4 2923 aa0.73□□□□□ -2.29
DHFR-204ENST00000508282 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.73□□□□□ -2.29
DHFR-204ENST00000508282 KDM5DQ9BY66 1539 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms