RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 VCX2Q9H322 139 aa8.76□□□□□ -1.01
RAB28-205ENST00000508274 LRP2P98164 4655 aa8.76□□□□□ -1.01
RAB28-205ENST00000508274 GHRHP01286 108 aa8.75□□□□□ -1.01
RAB28-205ENST00000508274 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
RAB28-205ENST00000508274 SMCO4Q9NRQ5 59 aa8.75□□□□□ -1.01
RAB28-205ENST00000508274 K7EMI3 77 aa8.74□□□□□ -1.01
RAB28-205ENST00000508274 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
RAB28-205ENST00000508274 LINC01561Q8N1V8 128 aa8.73□□□□□ -1.01
RAB28-205ENST00000508274 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
RAB28-205ENST00000508274 NPSP0C0P6 89 aa8.73□□□□□ -1.01
RAB28-205ENST00000508274 TOMM6Q96B49 74 aa8.73□□□□□ -1.01
RAB28-205ENST00000508274 RPS10P5Q9NQ39 176 aa8.73□□□□□ -1.01
RAB28-205ENST00000508274 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
RAB28-205ENST00000508274 COLCA2A8K830 154 aa8.72□□□□□ -1.01
RAB28-205ENST00000508274 NDUFC2-KCTD14E9PQ53 114 aa8.72□□□□□ -1.01
RAB28-205ENST00000508274 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
RAB28-205ENST00000508274 FAM19A3Q7Z5A8 133 aa8.72□□□□□ -1.01
RAB28-205ENST00000508274 PACRGQ96M98 296 aaPredicted RBP8.72□□□□□ -1.01
RAB28-205ENST00000508274 CDKN2A-AS1Q9UH64 79 aa8.72□□□□□ -1.01
RAB28-205ENST00000508274 TRAV9-1A0A075B6T8 112 aa8.71□□□□□ -1.02
RAB28-205ENST00000508274 M0QXV9 152 aa8.71□□□□□ -1.02
RAB28-205ENST00000508274 PRSS2P07478 247 aa8.71□□□□□ -1.02
RAB28-205ENST00000508274 TIMM17AQ99595 171 aa8.71□□□□□ -1.02
RAB28-205ENST00000508274 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
RAB28-205ENST00000508274 HERVK_113P63121 156 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 Q8IZM0 81 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 LINC00469Q8N7U9 141 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
RAB28-205ENST00000508274 CKS1BP61024 79 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 C6orf226Q5I0X4 101 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 PAPPA-AS1Q5QFB9 102 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 ERASQ7Z444 233 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 YPEL4Q96NS1 127 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 SCGB3A1Q96QR1 104 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 GNB1LQ9BYB4 327 aa8.69□□□□□ -1.02
RAB28-205ENST00000508274 GEMIN7Q9H840 131 aaKnown RBP8.69□□□□□ -1.02
RAB28-205ENST00000508274 S100PP25815 95 aa8.68□□□□□ -1.02
RAB28-205ENST00000508274 G0S2P27469 103 aa8.68□□□□□ -1.02
RAB28-205ENST00000508274 SEC11AP67812 179 aa8.68□□□□□ -1.02
RAB28-205ENST00000508274 UBE2BP63146 152 aa8.67□□□□□ -1.02
RAB28-205ENST00000508274 LINC01546A6NGU7 62 aa8.66□□□□□ -1.02
RAB28-205ENST00000508274 XAGE1AQ9HD64 81 aa8.66□□□□□ -1.02
RAB28-205ENST00000508274 SMIM1B2RUZ4 78 aa8.65□□□□□ -1.02
RAB28-205ENST00000508274 DIRC1Q969H9 104 aa8.65□□□□□ -1.02
RAB28-205ENST00000508274 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
RAB28-205ENST00000508274 F8VRH5 84 aa8.65□□□□□ -1.03
RAB28-205ENST00000508274 H0Y9J4 135 aa8.65□□□□□ -1.03
RAB28-205ENST00000508274 FABP9Q0Z7S8 132 aa8.64□□□□□ -1.03
RAB28-205ENST00000508274 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
RAB28-205ENST00000508274 FA2HQ7L5A8 372 aa8.63□□□□□ -1.03
RAB28-205ENST00000508274 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
RAB28-205ENST00000508274 CST9LQ9H4G1 147 aa8.63□□□□□ -1.03
RAB28-205ENST00000508274 IGLV5-45A0A087WSX0 123 aa8.62□□□□□ -1.03
RAB28-205ENST00000508274 RAB5BP61020 215 aa8.62□□□□□ -1.03
RAB28-205ENST00000508274 COX19Q49B96 90 aa8.62□□□□□ -1.03
RAB28-205ENST00000508274 C22orf24Q9Y442 160 aa8.62□□□□□ -1.03
RAB28-205ENST00000508274 SPINK8P0C7L1 97 aa8.61□□□□□ -1.03
RAB28-205ENST00000508274 CXCL5P42830 114 aa8.61□□□□□ -1.03
RAB28-205ENST00000508274 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
RAB28-205ENST00000508274 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
RAB28-205ENST00000508274 KRTAP1-4P0C5Y4 121 aa8.61□□□□□ -1.03
RAB28-205ENST00000508274 PMVKQ15126 192 aa8.61□□□□□ -1.03
RAB28-205ENST00000508274 PDZD11Q5EBL8 140 aa8.61□□□□□ -1.03
RAB28-205ENST00000508274 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
RAB28-205ENST00000508274 A0A096LNJ9 63 aa8.6□□□□□ -1.03
RAB28-205ENST00000508274 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
RAB28-205ENST00000508274 URB1-AS1Q96HZ7 61 aa8.6□□□□□ -1.03
RAB28-205ENST00000508274 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
RAB28-205ENST00000508274 TRAPPC1Q9Y5R8 145 aa8.57□□□□□ -1.04
RAB28-205ENST00000508274 LPAP08519 4548 aa8.57□□□□□ -1.04
RAB28-205ENST00000508274 PMCHL1Q16048 86 aa8.56□□□□□ -1.04
RAB28-205ENST00000508274 MRPL55Q7Z7F7 128 aaKnown RBP8.56□□□□□ -1.04
RAB28-205ENST00000508274 C5orf52A6NGY3 159 aa8.56□□□□□ -1.04
RAB28-205ENST00000508274 IGLC3P0DOY3 106 aa8.56□□□□□ -1.04
RAB28-205ENST00000508274 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
RAB28-205ENST00000508274 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
RAB28-205ENST00000508274 NUPR1O60356 82 aa8.55□□□□□ -1.04
RAB28-205ENST00000508274 ZNF861PO60384 105 aa8.55□□□□□ -1.04
RAB28-205ENST00000508274 LINC00614P0C842 121 aa8.55□□□□□ -1.04
RAB28-205ENST00000508274 NDUFA6P56556 154 aa8.55□□□□□ -1.04
RAB28-205ENST00000508274 RNF213Q63HN8 5207 aa8.55□□□□□ -1.04
RAB28-205ENST00000508274 IGLV1-50A0A075B6I6 118 aa8.54□□□□□ -1.04
RAB28-205ENST00000508274 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
RAB28-205ENST00000508274 LINC00167Q96N53 147 aa8.54□□□□□ -1.04
RAB28-205ENST00000508274 GAGE10A6NGK3 116 aa8.53□□□□□ -1.04
RAB28-205ENST00000508274 H3BRM9 83 aa8.53□□□□□ -1.04
RAB28-205ENST00000508274 HBDP02042 147 aa8.53□□□□□ -1.04
RAB28-205ENST00000508274 S100A6P06703 90 aa8.53□□□□□ -1.04
RAB28-205ENST00000508274 ZNF22P17026 224 aaPredicted RBP8.53□□□□□ -1.04
RAB28-205ENST00000508274 SNRPEP62304 92 aaKnown RBP8.53□□□□□ -1.04
RAB28-205ENST00000508274 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.04
RAB28-205ENST00000508274 ATP5LO75964 103 aa8.52□□□□□ -1.05
RAB28-205ENST00000508274 LINC00518Q8N0U6 118 aa8.52□□□□□ -1.05
RAB28-205ENST00000508274 C11orf86A6NJI1 115 aa8.51□□□□□ -1.05
RAB28-205ENST00000508274 BCE1O60756 84 aa8.51□□□□□ -1.05
RAB28-205ENST00000508274 TRGC2P03986 189 aa8.51□□□□□ -1.05
RAB28-205ENST00000508274 PFN2P35080 140 aa8.51□□□□□ -1.05
RAB28-205ENST00000508274 IGLV5-37A0A075B6J1 123 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms