RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 LINC00469Q8N7U9 141 aa9.73□□□□□ -0.85
HOXC4-203ENST00000507650 ALKBH7Q9BT30 221 aaPredicted RBP9.73□□□□□ -0.85
HOXC4-203ENST00000507650 SEC11CQ9BY50 192 aa9.73□□□□□ -0.85
HOXC4-203ENST00000507650 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.86
HOXC4-203ENST00000507650 H0Y9J4 135 aa9.71□□□□□ -0.86
HOXC4-203ENST00000507650 HERVK_113P63121 156 aa9.71□□□□□ -0.86
HOXC4-203ENST00000507650 C10orf91Q5T1B1 145 aa9.71□□□□□ -0.86
HOXC4-203ENST00000507650 ERASQ7Z444 233 aa9.71□□□□□ -0.86
HOXC4-203ENST00000507650 PRR26Q8N8Z3 221 aa9.71□□□□□ -0.86
HOXC4-203ENST00000507650 PACRGQ96M98 296 aaPredicted RBP9.71□□□□□ -0.86
HOXC4-203ENST00000507650 GNB1LQ9BYB4 327 aa9.71□□□□□ -0.86
HOXC4-203ENST00000507650 COMMD7Q86VX2 200 aa9.7□□□□□ -0.86
HOXC4-203ENST00000507650 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
HOXC4-203ENST00000507650 IGLV5-45A0A087WSX0 123 aa9.69□□□□□ -0.86
HOXC4-203ENST00000507650 PRSS2P07478 247 aa9.69□□□□□ -0.86
HOXC4-203ENST00000507650 DIRC1Q969H9 104 aa9.69□□□□□ -0.86
HOXC4-203ENST00000507650 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
HOXC4-203ENST00000507650 A0A096LNJ9 63 aa9.68□□□□□ -0.86
HOXC4-203ENST00000507650 CKS1BP61024 79 aa9.68□□□□□ -0.86
HOXC4-203ENST00000507650 C6orf226Q5I0X4 101 aa9.68□□□□□ -0.86
HOXC4-203ENST00000507650 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
HOXC4-203ENST00000507650 F8VRH5 84 aa9.67□□□□□ -0.86
HOXC4-203ENST00000507650 UBE2BP63146 152 aa9.67□□□□□ -0.86
HOXC4-203ENST00000507650 MRPL18Q9H0U6 180 aaKnown RBP9.67□□□□□ -0.86
HOXC4-203ENST00000507650 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
HOXC4-203ENST00000507650 GEMIN7Q9H840 131 aaKnown RBP9.67□□□□□ -0.86
HOXC4-203ENST00000507650 TINCRA0A1B0GVN0 87 aa9.66□□□□□ -0.86
HOXC4-203ENST00000507650 SEC11AP67812 179 aa9.66□□□□□ -0.86
HOXC4-203ENST00000507650 PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
HOXC4-203ENST00000507650 CARHSP1Q9Y2V2 147 aaKnown RBP9.66□□□□□ -0.86
HOXC4-203ENST00000507650 C22orf24Q9Y442 160 aa9.66□□□□□ -0.86
HOXC4-203ENST00000507650 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
HOXC4-203ENST00000507650 S100PP25815 95 aa9.64□□□□□ -0.87
HOXC4-203ENST00000507650 G0S2P27469 103 aa9.64□□□□□ -0.87
HOXC4-203ENST00000507650 PDZD11Q5EBL8 140 aa9.63□□□□□ -0.87
HOXC4-203ENST00000507650 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
HOXC4-203ENST00000507650 FABP9Q0Z7S8 132 aa9.62□□□□□ -0.87
HOXC4-203ENST00000507650 RHEBQ15382 184 aa9.62□□□□□ -0.87
HOXC4-203ENST00000507650 CXCL5P42830 114 aa9.61□□□□□ -0.87
HOXC4-203ENST00000507650 PMVKQ15126 192 aa9.61□□□□□ -0.87
HOXC4-203ENST00000507650 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
HOXC4-203ENST00000507650 COX19Q49B96 90 aa9.6□□□□□ -0.87
HOXC4-203ENST00000507650 FA2HQ7L5A8 372 aa9.6□□□□□ -0.87
HOXC4-203ENST00000507650 C18orf32Q8TCD1 76 aa9.6□□□□□ -0.87
HOXC4-203ENST00000507650 ZNF861PO60384 105 aa9.59□□□□□ -0.87
HOXC4-203ENST00000507650 IGLC3P0DOY3 106 aa9.59□□□□□ -0.87
HOXC4-203ENST00000507650 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
HOXC4-203ENST00000507650 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
HOXC4-203ENST00000507650 TP73-AS1Q9UF72 201 aa9.59□□□□□ -0.87
HOXC4-203ENST00000507650 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
HOXC4-203ENST00000507650 IGLV5-39A0A0G2JS06 123 aa9.58□□□□□ -0.88
HOXC4-203ENST00000507650 LINC00167Q96N53 147 aa9.58□□□□□ -0.88
HOXC4-203ENST00000507650 LINC01549A6NIU2 74 aa9.57□□□□□ -0.88
HOXC4-203ENST00000507650 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
HOXC4-203ENST00000507650 SCO1O75880 301 aa9.57□□□□□ -0.88
HOXC4-203ENST00000507650 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
HOXC4-203ENST00000507650 SMCO4Q9NRQ5 59 aa9.57□□□□□ -0.88
HOXC4-203ENST00000507650 IGLV5-37A0A075B6J1 123 aa9.56□□□□□ -0.88
HOXC4-203ENST00000507650 NUPR1O60356 82 aa9.56□□□□□ -0.88
HOXC4-203ENST00000507650 RAB5BP61020 215 aa9.56□□□□□ -0.88
HOXC4-203ENST00000507650 LBHQ53QV2 105 aaPredicted RBP9.55□□□□□ -0.88
HOXC4-203ENST00000507650 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
HOXC4-203ENST00000507650 Q8NDZ9 215 aa9.55□□□□□ -0.88
HOXC4-203ENST00000507650 YPEL4Q96NS1 127 aa9.55□□□□□ -0.88
HOXC4-203ENST00000507650 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
HOXC4-203ENST00000507650 A0A087X002 238 aa9.54□□□□□ -0.88
HOXC4-203ENST00000507650 GAGE10A6NGK3 116 aa9.54□□□□□ -0.88
HOXC4-203ENST00000507650 BCE1O60756 84 aa9.54□□□□□ -0.88
HOXC4-203ENST00000507650 LINC00614P0C842 121 aa9.54□□□□□ -0.88
HOXC4-203ENST00000507650 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
HOXC4-203ENST00000507650 HBDP02042 147 aa9.53□□□□□ -0.88
HOXC4-203ENST00000507650 APOC3P02656 99 aa9.51□□□□□ -0.89
HOXC4-203ENST00000507650 NDUFA6P56556 154 aa9.51□□□□□ -0.89
HOXC4-203ENST00000507650 H3BRM9 83 aa9.5□□□□□ -0.89
HOXC4-203ENST00000507650 VPREB1P12018 145 aa9.5□□□□□ -0.89
HOXC4-203ENST00000507650 PFN2P35080 140 aa9.5□□□□□ -0.89
HOXC4-203ENST00000507650 ATP5LO75964 103 aa9.49□□□□□ -0.89
HOXC4-203ENST00000507650 SND1-IT1Q9HBX3 110 aa9.49□□□□□ -0.89
HOXC4-203ENST00000507650 ANAPC11Q9NYG5 84 aa9.49□□□□□ -0.89
HOXC4-203ENST00000507650 RPL13AP40429 203 aaKnown RBP9.48□□□□□ -0.89
HOXC4-203ENST00000507650 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
HOXC4-203ENST00000507650 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
HOXC4-203ENST00000507650 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
HOXC4-203ENST00000507650 IGKV2-28A0A075B6P5 120 aa9.47□□□□□ -0.89
HOXC4-203ENST00000507650 IGKV2D-28P01615 120 aa9.47□□□□□ -0.89
HOXC4-203ENST00000507650 KRTAP13-2Q52LG2 175 aa9.47□□□□□ -0.89
HOXC4-203ENST00000507650 BAGE3Q86Y29 109 aa9.47□□□□□ -0.89
HOXC4-203ENST00000507650 TMEM238C9JI98 176 aa9.45□□□□□ -0.9
HOXC4-203ENST00000507650 SNAPINO95295 136 aa9.45□□□□□ -0.9
HOXC4-203ENST00000507650 SVBPQ8N300 66 aa9.45□□□□□ -0.9
HOXC4-203ENST00000507650 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
HOXC4-203ENST00000507650 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
HOXC4-203ENST00000507650 PRLHP81277 87 aa9.43□□□□□ -0.9
HOXC4-203ENST00000507650 MUC2Q02817 5179 aa9.43□□□□□ -0.9
HOXC4-203ENST00000507650 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
HOXC4-203ENST00000507650 M0R378 163 aa9.42□□□□□ -0.9
HOXC4-203ENST00000507650 TSPAN13O95857 204 aa9.42□□□□□ -0.9
HOXC4-203ENST00000507650 COX17Q14061 63 aa9.42□□□□□ -0.9
HOXC4-203ENST00000507650 CBLN2Q8IUK8 224 aa9.42□□□□□ -0.9
HOXC4-203ENST00000507650 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms