RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SFTA2Q6UW10 78 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 Q6ZTI0 123 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 ZNF664Q8N3J9 261 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 SLC25A29Q8N8R3 303 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 OR5A1Q8NGJ0 315 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 ZNRF2Q8NHG8 242 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 BAALCQ8WXS3 180 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 TMEM243Q9BU79 118 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 WFDC10AQ9H1F0 79 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 CST9LQ9H4G1 147 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 GEMIN7Q9H840 131 aaKnown RBP1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 MRPS16Q9Y3D3 137 aaKnown RBP1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 TGP01266 2768 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 HIVEP2P31629 2446 aa1.49□□□□□ -2.17
TOPBP1-205ENST00000506779 SVEP1Q4LDE5 3571 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 PLXNB1O43157 2135 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 FBN1P35555 2871 aaKnown RBP1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 TRBV6-8A0A0A6YYG3 113 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 TRAV8-6A0A0B4J262 113 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 TINCRA0A1B0GVN0 87 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 C11orf86A6NJI1 115 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 LINC00587B1AMM8 73 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 F5H768 121 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 PRM2P04554 102 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 P0DMU3 169 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 FAM231AP0DMU4 169 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 FAM231CP0DMU5 169 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 COX8AP10176 69 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 FGF6P10767 208 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 HERVK_113P63121 156 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 CIRBPQ14011 172 aaKnown RBP1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 KPRPQ5T749 579 aaPredicted RBP1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 LINC00173Q6ZV60 143 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 NEGR1Q7Z3B1 354 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 ATOH7Q8N100 152 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 C15orf56Q8N910 161 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 Q8N976 141 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 Q8NAQ8 132 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 ATP6V0E2Q8NHE4 81 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 COPS9Q8WXC6 57 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 PLEKHB2Q96CS7 222 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 PRO1933Q9H354 126 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 C11orf68Q9H3H3 251 aaKnown RBP1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 MRPL35Q9NZE8 188 aaKnown RBP1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 UBE2D4Q9Y2X8 147 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 ICOSQ9Y6W8 199 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 ABCA1O95477 2261 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 ACANP16112 2415 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 VPS13CQ709C8 3753 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 MXRA5Q9NR99 2828 aa1.48□□□□□ -2.17
TOPBP1-205ENST00000506779 WNK2Q9Y3S1 2297 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 MED13LQ71F56 2210 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 IGKV2D-24A0A075B6R9 120 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 MYMXA0A1B0GTQ4 84 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 A6NDN8 102 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 TMEM262E9PQX1 116 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 K7EP13 123 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 LGALS3P17931 250 aaKnown RBP1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 TCTAP57738 103 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 RPL39P62891 51 aaKnown RBP1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 SS18Q15532 418 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 TAL2Q16559 108 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 KRTAP21-3Q3LHN1 58 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 COL5A1-AS1Q5SY13 56 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 TMEM170BQ5T4T1 132 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 LELP1Q5T871 98 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 SCGB1D4Q6XE38 83 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 FAM19A3Q7Z5A8 133 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 C15orf53Q8NAA6 179 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 C14orf144Q96I85 54 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 AMELXQ99217 191 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 CHCHD7Q9BUK0 85 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 CDC42SE2Q9NRR3 84 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 HIGD1BQ9P298 99 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 MGAM2Q2M2H8 2515 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 AKAP9Q99996 3911 aa1.47□□□□□ -2.17
TOPBP1-205ENST00000506779 CSPG4Q6UVK1 2322 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 DEFB131BA0A096LNP1 70 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 TRAV10A0A0B4J240 114 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 TRAV8-4A0A0B4J246 113 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 IGHV1-58A0A0C4DH39 117 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 TMEM223A0PJW6 202 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 IGKV2-29A2NJV5 120 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 ZNF815PA8K554 130 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 TMEM238C9JI98 176 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 J3QQQ9 107 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 LEPROTO15243 131 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 DEFB4AO15263 64 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 APOMO95445 188 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC00694P0DN24 101 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 HTN3P15516 51 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 UBE2D1P51668 147 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 CCL18P55774 89 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 CTAG1AP78358 180 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 HSD52Q0P140 79 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 MOBPQ13875 183 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 DEFB116Q30KQ4 102 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 C12orf74Q32Q52 190 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms