RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 LINC00526Q96FQ7 95 aa10.51□□□□□ -0.73
HERC6-206ENST00000506714 KLK5Q9Y337 293 aaPredicted RBP10.51□□□□□ -0.73
HERC6-206ENST00000506714 LINC00959A0A1B0GUT2 108 aa10.5□□□□□ -0.73
HERC6-206ENST00000506714 PFN2P35080 140 aa10.5□□□□□ -0.73
HERC6-206ENST00000506714 C6orf226Q5I0X4 101 aa10.5□□□□□ -0.73
HERC6-206ENST00000506714 SMR3AQ99954 134 aa10.5□□□□□ -0.73
HERC6-206ENST00000506714 ESM1Q9NQ30 184 aa10.5□□□□□ -0.73
HERC6-206ENST00000506714 C19orf73Q9NVV2 129 aa10.5□□□□□ -0.73
HERC6-206ENST00000506714 HIVEP2P31629 2446 aa10.49□□□□□ -0.73
HERC6-206ENST00000506714 ATOX1O00244 68 aa10.49□□□□□ -0.73
HERC6-206ENST00000506714 LECT2O14960 151 aa10.49□□□□□ -0.73
HERC6-206ENST00000506714 LY6G6DO95868 133 aa10.49□□□□□ -0.73
HERC6-206ENST00000506714 IGLV1-51P01701 117 aa10.49□□□□□ -0.73
HERC6-206ENST00000506714 HIST1H4AP62805 103 aaKnown RBP10.49□□□□□ -0.73
HERC6-206ENST00000506714 OR13C6PQ8NH95 151 aa10.49□□□□□ -0.73
HERC6-206ENST00000506714 C14orf132Q9NPU4 83 aa10.49□□□□□ -0.73
HERC6-206ENST00000506714 COX7CP15954 63 aa10.47□□□□□ -0.73
HERC6-206ENST00000506714 SS18Q15532 418 aa10.47□□□□□ -0.73
HERC6-206ENST00000506714 Q6JHZ5 121 aa10.47□□□□□ -0.73
HERC6-206ENST00000506714 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
HERC6-206ENST00000506714 WFDC10AQ9H1F0 79 aa10.47□□□□□ -0.73
HERC6-206ENST00000506714 ORMDL1Q9P0S3 153 aa10.47□□□□□ -0.73
HERC6-206ENST00000506714 A0A1B0GUV1 79 aa10.46□□□□□ -0.73
HERC6-206ENST00000506714 A0A1B0GX51 115 aa10.46□□□□□ -0.73
HERC6-206ENST00000506714 Q8IZM0 81 aa10.46□□□□□ -0.73
HERC6-206ENST00000506714 OTOGQ6ZRI0 2925 aa10.46□□□□□ -0.73
HERC6-206ENST00000506714 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.74
HERC6-206ENST00000506714 C9orf129Q5T035 196 aaKnown RBP10.46□□□□□ -0.74
HERC6-206ENST00000506714 KIR2DL5BQ8NHK3 375 aa10.46□□□□□ -0.74
HERC6-206ENST00000506714 C3orf56Q8N813 242 aa10.45□□□□□ -0.74
HERC6-206ENST00000506714 C16orf95Q9H693 158 aa10.45□□□□□ -0.74
HERC6-206ENST00000506714 NF1P21359 2839 aa10.45□□□□□ -0.74
HERC6-206ENST00000506714 C2CD3Q4AC94 2353 aa10.45□□□□□ -0.74
HERC6-206ENST00000506714 CUBNO60494 3623 aa10.44□□□□□ -0.74
HERC6-206ENST00000506714 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
HERC6-206ENST00000506714 LINC01006Q8NI28 216 aa10.44□□□□□ -0.74
HERC6-206ENST00000506714 LINC00846Q9NV44 126 aa10.44□□□□□ -0.74
HERC6-206ENST00000506714 RPL18AQ02543 176 aaKnown RBP10.43□□□□□ -0.74
HERC6-206ENST00000506714 C2orf48Q96LS8 159 aa10.43□□□□□ -0.74
HERC6-206ENST00000506714 LINC00167Q96N53 147 aa10.43□□□□□ -0.74
HERC6-206ENST00000506714 CRYGAP11844 174 aa10.42□□□□□ -0.74
HERC6-206ENST00000506714 XCL1P47992 114 aa10.42□□□□□ -0.74
HERC6-206ENST00000506714 LINC00612Q8N6U2 182 aa10.42□□□□□ -0.74
HERC6-206ENST00000506714 JMJD7-PLA2G4BH0Y9G9 81 aa10.42□□□□□ -0.74
HERC6-206ENST00000506714 NCR3O14931 201 aa10.42□□□□□ -0.74
HERC6-206ENST00000506714 HILS1P60008 231 aa10.42□□□□□ -0.74
HERC6-206ENST00000506714 NDUFC2O95298 119 aa10.41□□□□□ -0.74
HERC6-206ENST00000506714 GYPEP15421 78 aa10.41□□□□□ -0.74
HERC6-206ENST00000506714 COX17Q14061 63 aa10.41□□□□□ -0.74
HERC6-206ENST00000506714 C11orf68Q9H3H3 251 aaKnown RBP10.41□□□□□ -0.74
HERC6-206ENST00000506714 CCKP06307 115 aa10.41□□□□□ -0.74
HERC6-206ENST00000506714 DEFB130BP0DP73 79 aa10.41□□□□□ -0.74
HERC6-206ENST00000506714 DEFB130AP0DP74 79 aa10.41□□□□□ -0.74
HERC6-206ENST00000506714 S100A7L2Q5SY68 101 aa10.41□□□□□ -0.74
HERC6-206ENST00000506714 SLPIP03973 132 aa10.4□□□□□ -0.74
HERC6-206ENST00000506714 SETD2Q9BYW2 2564 aaPredicted RBP10.4□□□□□ -0.74
HERC6-206ENST00000506714 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.75
HERC6-206ENST00000506714 TMEM256-PLSCR3K7ERE1 68 aa10.39□□□□□ -0.75
HERC6-206ENST00000506714 Q8N814 137 aa10.38□□□□□ -0.75
HERC6-206ENST00000506714 ANK3Q12955 4377 aaKnown RBP10.38□□□□□ -0.75
HERC6-206ENST00000506714 PRO0255Q9UI72 69 aa10.38□□□□□ -0.75
HERC6-206ENST00000506714 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
HERC6-206ENST00000506714 NSD1Q96L73 2696 aaPredicted RBP10.36□□□□□ -0.75
HERC6-206ENST00000506714 NANOS2P60321 138 aaKnown RBP10.36□□□□□ -0.75
HERC6-206ENST00000506714 CD164L2Q6UWJ8 174 aa10.36□□□□□ -0.75
HERC6-206ENST00000506714 SERP2Q8N6R1 65 aa10.36□□□□□ -0.75
HERC6-206ENST00000506714 SETXQ7Z333 2677 aaKnown RBP10.36□□□□□ -0.75
HERC6-206ENST00000506714 SMIM9A6NGZ8 99 aa10.36□□□□□ -0.75
HERC6-206ENST00000506714 ATP5EP2Q5VTU8 51 aa10.36□□□□□ -0.75
HERC6-206ENST00000506714 FLNBO75369 2602 aaKnown RBP10.36□□□□□ -0.75
HERC6-206ENST00000506714 IGHV4-28A0A0C4DH34 117 aa10.35□□□□□ -0.75
HERC6-206ENST00000506714 KIAA0087Q14695 138 aa10.35□□□□□ -0.75
HERC6-206ENST00000506714 HIVEP1P15822 2718 aa10.34□□□□□ -0.75
HERC6-206ENST00000506714 JMJD1CQ15652 2540 aa10.34□□□□□ -0.75
HERC6-206ENST00000506714 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
HERC6-206ENST00000506714 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
HERC6-206ENST00000506714 hADV29S1A0JD25 119 aa10.32□□□□□ -0.76
HERC6-206ENST00000506714 J3KT08 172 aa10.32□□□□□ -0.76
HERC6-206ENST00000506714 PRR3P79522 188 aaKnown RBP10.32□□□□□ -0.76
HERC6-206ENST00000506714 MUC7Q8TAX7 377 aa10.32□□□□□ -0.76
HERC6-206ENST00000506714 A0A087WVE0 104 aa10.31□□□□□ -0.76
HERC6-206ENST00000506714 LINC00269Q8N2A0 174 aa10.31□□□□□ -0.76
HERC6-206ENST00000506714 CHCHD10Q8WYQ3 142 aaPredicted RBP10.31□□□□□ -0.76
HERC6-206ENST00000506714 X6R8D5 127 aa10.31□□□□□ -0.76
HERC6-206ENST00000506714 FN1P02751 2386 aaKnown RBP10.31□□□□□ -0.76
HERC6-206ENST00000506714 RPS28P62857 69 aaKnown RBP10.31□□□□□ -0.76
HERC6-206ENST00000506714 LYRM9A8MSI8 78 aa10.3□□□□□ -0.76
HERC6-206ENST00000506714 LYPD5Q6UWN5 251 aa10.3□□□□□ -0.76
HERC6-206ENST00000506714 A0A096LPF7 62 aa10.29□□□□□ -0.76
HERC6-206ENST00000506714 TMEM258P61165 79 aa10.29□□□□□ -0.76
HERC6-206ENST00000506714 TRBV10-3A0A0K0K1G6 114 aa10.28□□□□□ -0.76
HERC6-206ENST00000506714 REG3AQ06141 175 aa10.28□□□□□ -0.76
HERC6-206ENST00000506714 ANGP03950 147 aaKnown RBP10.28□□□□□ -0.76
HERC6-206ENST00000506714 C6orf99Q4VX62 202 aa10.28□□□□□ -0.76
HERC6-206ENST00000506714 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
HERC6-206ENST00000506714 UBL5Q9BZL1 73 aa10.28□□□□□ -0.76
HERC6-206ENST00000506714 LINC00575Q6W349 94 aa10.27□□□□□ -0.76
HERC6-206ENST00000506714 F8P00451 2351 aa10.27□□□□□ -0.77
HERC6-206ENST00000506714 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
HERC6-206ENST00000506714 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms