RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 IGHV3OR16-9A0A0B4J2B5 98 aa3.93□□□□□ -1.78
SCLT1-207ENST00000506233 A6NDN8 102 aa3.93□□□□□ -1.78
SCLT1-207ENST00000506233 C8orf87E5RJ46 101 aa3.93□□□□□ -1.78
SCLT1-207ENST00000506233 TGP01266 2768 aa3.93□□□□□ -1.78
SCLT1-207ENST00000506233 TRBV6-4A0A1B0GX49 114 aa3.93□□□□□ -1.78
SCLT1-207ENST00000506233 CDKN2A-AS1Q9UH64 79 aa3.93□□□□□ -1.78
SCLT1-207ENST00000506233 H3BRM9 83 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 IGHV3-30-3P0DP02 117 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 COL5A1-AS1Q5SY13 56 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 SMIM15Q7Z3B0 74 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 TRAV8-4A0A0B4J246 113 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 A0A0J9YXY3 114 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 ZNF25P17030 456 aaPredicted RBP3.92□□□□□ -1.78
SCLT1-207ENST00000506233 NANOS2P60321 138 aaKnown RBP3.92□□□□□ -1.78
SCLT1-207ENST00000506233 FAM222AQ5U5X8 452 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 TNXBP22105 4242 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 IGKV2-28A0A075B6P5 120 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 IGKV2D-28P01615 120 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 KRTAP7-1Q8IUC3 87 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 C16orf74Q96GX8 76 aa3.92□□□□□ -1.78
SCLT1-207ENST00000506233 DYNC1H1Q14204 4646 aaKnown RBP3.92□□□□□ -1.78
SCLT1-207ENST00000506233 H0Y9J4 135 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 ZNF56Q15929 161 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 C1orf195Q5TG92 126 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 LINC01587Q99440 93 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 IGLL5B9A064 214 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 S100A4P26447 101 aaKnown RBP3.91□□□□□ -1.78
SCLT1-207ENST00000506233 C12orf74Q32Q52 190 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 AMMECR1LQ6DCA0 310 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 NOTCH2NLQ7Z3S9 236 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 LINC00337Q8N6G1 96 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 DAZ3Q9NR90 486 aaKnown RBP3.91□□□□□ -1.78
SCLT1-207ENST00000506233 HSD52Q0P140 79 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 ZFAND6Q6FIF0 208 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 Q8NBF4 154 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 CYSLTR1Q9Y271 337 aa3.91□□□□□ -1.78
SCLT1-207ENST00000506233 A0A1W2PPM0 123 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 LEPROTO15243 131 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 DEFB4AO15263 64 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 HTN1P15515 57 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 NMUP48645 174 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 RBM12B-AS1Q9P1G2 102 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 NOTCH1P46531 2555 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 COL6A5A8TX70 2615 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 F8P00451 2351 aa3.9□□□□□ -1.78
SCLT1-207ENST00000506233 LOC107984156A0A0G2JMH3 177 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 TRBV10-1A0A0K0K1A3 114 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 ARL17AQ8IVW1 177 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 SMIM20Q8N5G0 67 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 PRR34Q9NV39 138 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 HSPG2P98160 4391 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 A0A096LPF7 62 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 IGHV1-58A0A0C4DH39 117 aa3.9□□□□□ -1.79
SCLT1-207ENST00000506233 TRBV6-8A0A0A6YYG3 113 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 RPL36ALQ969Q0 106 aaKnown RBP3.89□□□□□ -1.79
SCLT1-207ENST00000506233 SPANXDQ9BXN6 97 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 SPANXCQ9NY87 97 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 PKIGQ9Y2B9 76 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 TRGV1A0A0A0MS02 117 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 CXCL6P80162 114 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 ENHOQ6UWT2 76 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 DYNLRB2Q8TF09 96 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 J3QQQ9 107 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 PPP1R17O96001 155 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 SS18Q15532 418 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 CARD19Q96LW7 228 aa3.89□□□□□ -1.79
SCLT1-207ENST00000506233 HIVEP2P31629 2446 aa3.88□□□□□ -1.79
SCLT1-207ENST00000506233 K7EP34 96 aa3.88□□□□□ -1.79
SCLT1-207ENST00000506233 INSL3P51460 131 aa3.88□□□□□ -1.79
SCLT1-207ENST00000506233 SPANXA1Q9NS26 97 aa3.88□□□□□ -1.79
SCLT1-207ENST00000506233 SEC11AP67812 179 aa3.88□□□□□ -1.79
SCLT1-207ENST00000506233 TEX29Q8N6K0 151 aa3.88□□□□□ -1.79
SCLT1-207ENST00000506233 ZNF418Q8TF45 676 aaPredicted RBP3.88□□□□□ -1.79
SCLT1-207ENST00000506233 HIST1H4GQ99525 98 aa3.88□□□□□ -1.79
SCLT1-207ENST00000506233 SPINK8P0C7L1 97 aa3.88□□□□□ -1.79
SCLT1-207ENST00000506233 C9orf129Q5T035 196 aaKnown RBP3.88□□□□□ -1.79
SCLT1-207ENST00000506233 DAZ4Q86SG3 579 aaKnown RBP3.88□□□□□ -1.79
SCLT1-207ENST00000506233 A0A1B0GUV1 79 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 NDUFA1O15239 70 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 DEFB135Q30KP9 77 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 K7EIL1 84 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 IGHV3-33P01772 117 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 SLPIP03973 132 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 MUSTN1Q8IVN3 82 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 STAB2Q8WWQ8 2551 aa3.87□□□□□ -1.79
SCLT1-207ENST00000506233 IGHV3-64A0A075B6Q5 118 aa3.86□□□□□ -1.79
SCLT1-207ENST00000506233 CHTF8P0CG12 524 aa3.86□□□□□ -1.79
SCLT1-207ENST00000506233 BATFQ16520 125 aa3.86□□□□□ -1.79
SCLT1-207ENST00000506233 TTC32Q5I0X7 151 aa3.86□□□□□ -1.79
SCLT1-207ENST00000506233 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
SCLT1-207ENST00000506233 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
SCLT1-207ENST00000506233 TM2D3Q9BRN9 247 aa3.86□□□□□ -1.79
SCLT1-207ENST00000506233 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
SCLT1-207ENST00000506233 LINC00959A0A1B0GUT2 108 aa3.85□□□□□ -1.79
SCLT1-207ENST00000506233 RRN3P1Q2M238 152 aa3.85□□□□□ -1.79
SCLT1-207ENST00000506233 DAND5Q8N907 189 aa3.85□□□□□ -1.79
SCLT1-207ENST00000506233 SIGMAR1Q99720 223 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms