RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 SPINK8P0C7L1 97 aa7.2□□□□□ -1.26
CPNE4-206ENST00000505957 SS18Q15532 418 aa7.2□□□□□ -1.26
CPNE4-206ENST00000505957 Q5VSD8 79 aa7.2□□□□□ -1.26
CPNE4-206ENST00000505957 PRR34Q9NV39 138 aa7.2□□□□□ -1.26
CPNE4-206ENST00000505957 NDUFA1O15239 70 aa7.19□□□□□ -1.26
CPNE4-206ENST00000505957 TIMM17BO60830 172 aa7.19□□□□□ -1.26
CPNE4-206ENST00000505957 BATFQ16520 125 aa7.19□□□□□ -1.26
CPNE4-206ENST00000505957 SCGB1D4Q6XE38 83 aa7.19□□□□□ -1.26
CPNE4-206ENST00000505957 CEND1Q8N111 149 aa7.19□□□□□ -1.26
CPNE4-206ENST00000505957 NDUFA12Q9UI09 145 aa7.19□□□□□ -1.26
CPNE4-206ENST00000505957 A6NDN8 102 aa7.18□□□□□ -1.26
CPNE4-206ENST00000505957 SFTA2Q6UW10 78 aa7.18□□□□□ -1.26
CPNE4-206ENST00000505957 C10orf126Q8N4M7 172 aa7.18□□□□□ -1.26
CPNE4-206ENST00000505957 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
CPNE4-206ENST00000505957 IGHV3-64A0A075B6Q5 118 aa7.17□□□□□ -1.26
CPNE4-206ENST00000505957 A0A0J9YXY3 114 aa7.17□□□□□ -1.26
CPNE4-206ENST00000505957 TMEM238C9JI98 176 aa7.17□□□□□ -1.26
CPNE4-206ENST00000505957 REG3AQ06141 175 aa7.17□□□□□ -1.26
CPNE4-206ENST00000505957 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
CPNE4-206ENST00000505957 Q6ZVH6 145 aa7.17□□□□□ -1.26
CPNE4-206ENST00000505957 HIST1H4GQ99525 98 aa7.17□□□□□ -1.26
CPNE4-206ENST00000505957 TMEM238LA0A1B0GVL6 79 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 A0A1B0GWB2 263 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 ANGP03950 147 aaKnown RBP7.16□□□□□ -1.26
CPNE4-206ENST00000505957 FXYD2P54710 66 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 HERV-K104P63124 156 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 LINC01556Q5JQF7 62 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 LINC00269Q8N2A0 174 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 ZNF625Q96I27 306 aaPredicted RBP7.16□□□□□ -1.26
CPNE4-206ENST00000505957 SPANXDQ9BXN6 97 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 PPDPFQ9H3Y8 114 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 SPANXCQ9NY87 97 aa7.16□□□□□ -1.26
CPNE4-206ENST00000505957 FLG2Q5D862 2391 aaPredicted RBP7.16□□□□□ -1.26
CPNE4-206ENST00000505957 TRAV8-4A0A0B4J246 113 aa7.15□□□□□ -1.26
CPNE4-206ENST00000505957 A6NJY4 79 aa7.15□□□□□ -1.26
CPNE4-206ENST00000505957 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
CPNE4-206ENST00000505957 IGHV3-30-5P0DP03 117 aa7.15□□□□□ -1.26
CPNE4-206ENST00000505957 GCSHP23434 173 aa7.15□□□□□ -1.26
CPNE4-206ENST00000505957 KRTAP10-1P60331 282 aa7.15□□□□□ -1.26
CPNE4-206ENST00000505957 LITAFQ99732 161 aa7.15□□□□□ -1.26
CPNE4-206ENST00000505957 A0A087WTM6 91 aa7.14□□□□□ -1.27
CPNE4-206ENST00000505957 IGKV3OR2-268A0A0C4DH90 116 aa7.14□□□□□ -1.27
CPNE4-206ENST00000505957 TAX1BP3O14907 124 aa7.14□□□□□ -1.27
CPNE4-206ENST00000505957 DNAH10OSP0CZ25 163 aa7.14□□□□□ -1.27
CPNE4-206ENST00000505957 FUSP35637 526 aaKnown RBP eCLIP7.14□□□□□ -1.27
CPNE4-206ENST00000505957 MIAQ16674 131 aa7.14□□□□□ -1.27
CPNE4-206ENST00000505957 WFDC10BQ8IUB3 73 aa7.14□□□□□ -1.27
CPNE4-206ENST00000505957 Q8N3U1 123 aa7.14□□□□□ -1.27
CPNE4-206ENST00000505957 COX7B2Q8TF08 81 aa7.14□□□□□ -1.27
CPNE4-206ENST00000505957 CHCHD10Q8WYQ3 142 aaPredicted RBP7.14□□□□□ -1.27
CPNE4-206ENST00000505957 FAM229AH3BQW9 127 aa7.13□□□□□ -1.27
CPNE4-206ENST00000505957 K7EP13 123 aa7.13□□□□□ -1.27
CPNE4-206ENST00000505957 COX7A2LO14548 114 aa7.13□□□□□ -1.27
CPNE4-206ENST00000505957 IFITM1P13164 125 aa7.13□□□□□ -1.27
CPNE4-206ENST00000505957 PTTG1IPP53801 180 aa7.13□□□□□ -1.27
CPNE4-206ENST00000505957 FOXI1Q12951 378 aa7.13□□□□□ -1.27
CPNE4-206ENST00000505957 SRSF9Q13242 221 aaKnown RBP eCLIP7.13□□□□□ -1.27
CPNE4-206ENST00000505957 Q8IZM0 81 aa7.13□□□□□ -1.27
CPNE4-206ENST00000505957 A0A1B0GV90 55 aa7.12□□□□□ -1.27
CPNE4-206ENST00000505957 CRPP02741 224 aa7.12□□□□□ -1.27
CPNE4-206ENST00000505957 SMR3BP02814 79 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-206ENST00000505957 CXCL5P42830 114 aa7.12□□□□□ -1.27
CPNE4-206ENST00000505957 XCL1P47992 114 aa7.12□□□□□ -1.27
CPNE4-206ENST00000505957 CLPSL2Q6UWE3 100 aa7.12□□□□□ -1.27
CPNE4-206ENST00000505957 ENHOQ6UWT2 76 aa7.12□□□□□ -1.27
CPNE4-206ENST00000505957 KLK12Q9UKR0 248 aa7.12□□□□□ -1.27
CPNE4-206ENST00000505957 COX11Q9Y6N1 276 aa7.12□□□□□ -1.27
CPNE4-206ENST00000505957 SMIM13P0DJ93 91 aa7.11□□□□□ -1.27
CPNE4-206ENST00000505957 RPL24P83731 157 aaKnown RBP7.11□□□□□ -1.27
CPNE4-206ENST00000505957 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
CPNE4-206ENST00000505957 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
CPNE4-206ENST00000505957 COPS9Q8WXC6 57 aa7.11□□□□□ -1.27
CPNE4-206ENST00000505957 SRRM2Q9UQ35 2752 aaKnown RBP7.11□□□□□ -1.27
CPNE4-206ENST00000505957 J3QL48 77 aa7.1□□□□□ -1.27
CPNE4-206ENST00000505957 APOMO95445 188 aa7.1□□□□□ -1.27
CPNE4-206ENST00000505957 IGHV3-33P01772 117 aa7.1□□□□□ -1.27
CPNE4-206ENST00000505957 C9orf118A6NHY6 69 aa7.09□□□□□ -1.27
CPNE4-206ENST00000505957 IBA57-AS1B1ANH7 110 aa7.09□□□□□ -1.27
CPNE4-206ENST00000505957 KIAA0087Q14695 138 aa7.09□□□□□ -1.27
CPNE4-206ENST00000505957 KRTAP26-1Q6PEX3 210 aa7.09□□□□□ -1.27
CPNE4-206ENST00000505957 UBE2WQ96B02 151 aa7.09□□□□□ -1.27
CPNE4-206ENST00000505957 NHP2Q9NX24 153 aaKnown RBP7.09□□□□□ -1.27
CPNE4-206ENST00000505957 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.08□□□□□ -1.28
CPNE4-206ENST00000505957 A0A0B4J2C4 111 aa7.08□□□□□ -1.28
CPNE4-206ENST00000505957 GAGE12HA6NDE8 117 aa7.08□□□□□ -1.28
CPNE4-206ENST00000505957 PRSS2P07478 247 aa7.08□□□□□ -1.28
CPNE4-206ENST00000505957 NTN5Q8WTR8 489 aaPredicted RBP7.08□□□□□ -1.28
CPNE4-206ENST00000505957 IGLV10-54A0A075B6I4 117 aa7.07□□□□□ -1.28
CPNE4-206ENST00000505957 MALP21145 153 aa7.07□□□□□ -1.28
CPNE4-206ENST00000505957 C6orf226Q5I0X4 101 aa7.07□□□□□ -1.28
CPNE4-206ENST00000505957 ADAMTSL4-AS1Q5T5F5 129 aa7.07□□□□□ -1.28
CPNE4-206ENST00000505957 MUSTN1Q8IVN3 82 aa7.07□□□□□ -1.28
CPNE4-206ENST00000505957 TOMM7Q9P0U1 55 aa7.07□□□□□ -1.28
CPNE4-206ENST00000505957 KRTAP29-1A8MX34 341 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-206ENST00000505957 F8WDY8 70 aa7.06□□□□□ -1.28
CPNE4-206ENST00000505957 MEIG1Q5JSS6 88 aa7.06□□□□□ -1.28
CPNE4-206ENST00000505957 C1orf43Q9BWL3 253 aa7.06□□□□□ -1.28
CPNE4-206ENST00000505957 DNAH8Q96JB1 4490 aa7.05□□□□□ -1.28
CPNE4-206ENST00000505957 IGLV5-52A0A0A0MRZ9 124 aa7.05□□□□□ -1.28
CPNE4-206ENST00000505957 A4D1N5 150 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms