RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 A0A0G2JND7 137 aa0.03□□□□□ -2.4
CHD1-203ENST00000505657 TRBV7-4A0A0J9YYF1 115 aa0.03□□□□□ -2.4
CHD1-203ENST00000505657 LINC00959A0A1B0GUT2 108 aa0.03□□□□□ -2.4
CHD1-203ENST00000505657 ASIPP42127 132 aa0.03□□□□□ -2.4
CHD1-203ENST00000505657 KIAA0556O60303 1618 aa0.02□□□□□ -2.41
CHD1-203ENST00000505657 KMT2AQ03164 3969 aa0.02□□□□□ -2.41
CHD1-203ENST00000505657 COL14A1Q05707 1796 aaKnown RBP0.02□□□□□ -2.41
CHD1-203ENST00000505657 KIF20BQ96Q89 1820 aa0.02□□□□□ -2.41
CHD1-203ENST00000505657 COX6B1P14854 86 aa0.02□□□□□ -2.41
CHD1-203ENST00000505657 RBP2P50120 134 aa0.02□□□□□ -2.41
CHD1-203ENST00000505657 DEFB123Q8N688 67 aa0.02□□□□□ -2.41
CHD1-203ENST00000505657 DCHS2Q6V1P9 2916 aa0.02□□□□□ -2.41
CHD1-203ENST00000505657 GAPVD1Q14C86 1478 aa0.02□□□□□ -2.41
CHD1-203ENST00000505657 ANKRD26Q9UPS8 1709 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 SSPOA2VEC9 5147 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 MAP1BP46821 2468 aaKnown RBP0.01□□□□□ -2.41
CHD1-203ENST00000505657 TRAV30A0A087WSZ9 112 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 MT-ATP8P03928 68 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 SPRR1BP22528 89 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 PMCHL2Q9BQD1 86 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 FXYD6Q9H0Q3 95 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 CACFD1Q9UGQ2 172 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 AP4S1Q9Y587 144 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 CNTLNQ9NXG0 1405 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 PLEKHH2Q8IVE3 1493 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 SHPRHQ149N8 1683 aa0.01□□□□□ -2.41
CHD1-203ENST00000505657 C7orf77A4D0Y5 90 aa0□□□□□ -2.41
CHD1-203ENST00000505657 TARBP1Q13395 1621 aaKnown RBP0□□□□□ -2.41
CHD1-203ENST00000505657 VAMP8Q9BV40 100 aa0□□□□□ -2.41
CHD1-203ENST00000505657 MLH3Q9UHC1 1453 aa0□□□□□ -2.41
CHD1-203ENST00000505657 HUWE1Q7Z6Z7 4374 aaKnown RBP-0□□□□□ -2.41
CHD1-203ENST00000505657 WNK1Q9H4A3 2382 aa-0.01□□□□□ -2.41
CHD1-203ENST00000505657 C5P01031 1676 aa-0.01□□□□□ -2.41
CHD1-203ENST00000505657 CLTCQ00610 1675 aaKnown RBP-0.01□□□□□ -2.41
CHD1-203ENST00000505657 SETBP1Q9Y6X0 1596 aa-0.01□□□□□ -2.41
CHD1-203ENST00000505657 K7EQZ3 153 aa-0.01□□□□□ -2.41
CHD1-203ENST00000505657 TNXBP22105 4242 aa-0.02□□□□□ -2.41
CHD1-203ENST00000505657 PRDM15P57071 1507 aaPredicted RBP-0.02□□□□□ -2.41
CHD1-203ENST00000505657 ANKRD36BQ8N2N9 1353 aa-0.02□□□□□ -2.41
CHD1-203ENST00000505657 BSNQ9UPA5 3926 aa-0.02□□□□□ -2.41
CHD1-203ENST00000505657 PSMG4Q5JS54 123 aa-0.02□□□□□ -2.41
CHD1-203ENST00000505657 LINC00846Q9NV44 126 aa-0.02□□□□□ -2.41
CHD1-203ENST00000505657 FYCO1Q9BQS8 1478 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 FAT2Q9NYQ8 4349 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 TRBV25-1A0A075B6N4 114 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 A0A1B0GU69 56 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 SYS1-DBNDD2H3BUS1 97 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 NDUFC1O43677 76 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 MPC2O95563 127 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 PRM1P04553 51 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 PMCHL1Q16048 86 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 NCMAPQ5T1S8 102 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 DEFB107AQ8IZN7 70 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 MYCBP2O75592 4640 aa-0.03□□□□□ -2.41
CHD1-203ENST00000505657 RGPD4Q7Z3J3 1758 aa-0.04□□□□□ -2.42
CHD1-203ENST00000505657 CRYBG1Q9Y4K1 1723 aa-0.04□□□□□ -2.42
CHD1-203ENST00000505657 FLNAP21333 2647 aaKnown RBP-0.04□□□□□ -2.42
CHD1-203ENST00000505657 UQCRHP07919 91 aa-0.04□□□□□ -2.42
CHD1-203ENST00000505657 HMCN2Q8NDA2 5059 aa-0.04□□□□□ -2.42
CHD1-203ENST00000505657 RGPD2P0DJD1 1756 aa-0.04□□□□□ -2.42
CHD1-203ENST00000505657 PKD1L3Q7Z443 1732 aa-0.04□□□□□ -2.42
CHD1-203ENST00000505657 KIAA1551Q9HCM1 1747 aa-0.04□□□□□ -2.42
CHD1-203ENST00000505657 LPAP08519 4548 aa-0.05□□□□□ -2.42
CHD1-203ENST00000505657 H7BZZ5 65 aa-0.05□□□□□ -2.42
CHD1-203ENST00000505657 ATOX1O00244 68 aa-0.05□□□□□ -2.42
CHD1-203ENST00000505657 KLK9Q2XQG4 91 aa-0.05□□□□□ -2.42
CHD1-203ENST00000505657 C6orf201Q7Z4U5 140 aa-0.05□□□□□ -2.42
CHD1-203ENST00000505657 ACBD7Q8N6N7 88 aa-0.05□□□□□ -2.42
CHD1-203ENST00000505657 TRGV9Q99603 122 aa-0.05□□□□□ -2.42
CHD1-203ENST00000505657 RGPD3A6NKT7 1758 aaPredicted RBP-0.05□□□□□ -2.42
CHD1-203ENST00000505657 NSD1Q96L73 2696 aaPredicted RBP-0.06□□□□□ -2.42
CHD1-203ENST00000505657 H3BQF6 201 aa-0.06□□□□□ -2.42
CHD1-203ENST00000505657 GNGT1P63211 74 aa-0.06□□□□□ -2.42
CHD1-203ENST00000505657 COL5A1-AS1Q5SY13 56 aa-0.06□□□□□ -2.42
CHD1-203ENST00000505657 DEFB105AQ8NG35 78 aa-0.06□□□□□ -2.42
CHD1-203ENST00000505657 USMG5Q96IX5 58 aa-0.06□□□□□ -2.42
CHD1-203ENST00000505657 CHD8Q9HCK8 2581 aa-0.06□□□□□ -2.42
CHD1-203ENST00000505657 APC2O95996 2303 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 NRXN1Q9ULB1 1477 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 LOC730098B7Z3J9 87 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 H0Y9P7 68 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 FAUP35544 74 aaKnown RBP-0.07□□□□□ -2.42
CHD1-203ENST00000505657 SERP2Q8N6R1 65 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 DPY30Q9C005 99 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 CRIPTQ9P021 101 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 ZANQ9Y493 2812 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 LRRC37AA6NMS7 1700 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 UBR1Q8IWV7 1749 aa-0.07□□□□□ -2.42
CHD1-203ENST00000505657 TEX14Q8IWB6 1497 aa-0.08□□□□□ -2.42
CHD1-203ENST00000505657 RAPGEF2Q9Y4G8 1499 aa-0.08□□□□□ -2.42
CHD1-203ENST00000505657 HSPG2P98160 4391 aa-0.08□□□□□ -2.42
CHD1-203ENST00000505657 M0R143 59 aa-0.08□□□□□ -2.42
CHD1-203ENST00000505657 LINC00032P0C843 101 aa-0.08□□□□□ -2.42
CHD1-203ENST00000505657 COX8AP10176 69 aa-0.08□□□□□ -2.42
CHD1-203ENST00000505657 SPRR2DP22532 72 aa-0.08□□□□□ -2.42
CHD1-203ENST00000505657 CUX1P39880 1505 aa-0.08□□□□□ -2.42
CHD1-203ENST00000505657 SETXQ7Z333 2677 aaKnown RBP-0.09□□□□□ -2.42
CHD1-203ENST00000505657 ABCC10Q5T3U5 1492 aa-0.09□□□□□ -2.42
CHD1-203ENST00000505657 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
CHD1-203ENST00000505657 SPINK4O60575 86 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms