RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 TMEM238C9JI98 176 aa6.79□□□□□ -1.32
DDX41-203ENST00000504781 CXCL5P42830 114 aa6.79□□□□□ -1.32
DDX41-203ENST00000504781 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
DDX41-203ENST00000504781 BVES-AS1Q5T3Y7 98 aa6.79□□□□□ -1.32
DDX41-203ENST00000504781 CEND1Q8N111 149 aa6.79□□□□□ -1.32
DDX41-203ENST00000504781 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
DDX41-203ENST00000504781 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
DDX41-203ENST00000504781 HINT1P49773 126 aaPredicted RBP6.78□□□□□ -1.32
DDX41-203ENST00000504781 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
DDX41-203ENST00000504781 CKS1BP61024 79 aa6.78□□□□□ -1.32
DDX41-203ENST00000504781 TOMM7Q9P0U1 55 aa6.78□□□□□ -1.32
DDX41-203ENST00000504781 IGKV2D-24A0A075B6R9 120 aa6.77□□□□□ -1.33
DDX41-203ENST00000504781 IFITM1P13164 125 aa6.77□□□□□ -1.33
DDX41-203ENST00000504781 GCSHP23434 173 aa6.77□□□□□ -1.33
DDX41-203ENST00000504781 COL5A1-AS1Q5SY13 56 aa6.77□□□□□ -1.33
DDX41-203ENST00000504781 COPS9Q8WXC6 57 aa6.77□□□□□ -1.33
DDX41-203ENST00000504781 SPANXDQ9BXN6 97 aa6.77□□□□□ -1.33
DDX41-203ENST00000504781 PPDPFQ9H3Y8 114 aa6.77□□□□□ -1.33
DDX41-203ENST00000504781 SPANXCQ9NY87 97 aa6.77□□□□□ -1.33
DDX41-203ENST00000504781 EPPK1P58107 5090 aaKnown RBP6.77□□□□□ -1.33
DDX41-203ENST00000504781 HYDINQ4G0P3 5121 aa6.76□□□□□ -1.33
DDX41-203ENST00000504781 A6NDN8 102 aa6.76□□□□□ -1.33
DDX41-203ENST00000504781 COX17Q14061 63 aa6.76□□□□□ -1.33
DDX41-203ENST00000504781 TTC32Q5I0X7 151 aa6.76□□□□□ -1.33
DDX41-203ENST00000504781 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
DDX41-203ENST00000504781 LITAFQ99732 161 aa6.76□□□□□ -1.33
DDX41-203ENST00000504781 TMEM238LA0A1B0GVL6 79 aa6.75□□□□□ -1.33
DDX41-203ENST00000504781 A6NJY4 79 aa6.75□□□□□ -1.33
DDX41-203ENST00000504781 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
DDX41-203ENST00000504781 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
DDX41-203ENST00000504781 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
DDX41-203ENST00000504781 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
DDX41-203ENST00000504781 SMIM13P0DJ93 91 aa6.74□□□□□ -1.33
DDX41-203ENST00000504781 BATFQ16520 125 aa6.74□□□□□ -1.33
DDX41-203ENST00000504781 MEIG1Q5JSS6 88 aa6.74□□□□□ -1.33
DDX41-203ENST00000504781 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
DDX41-203ENST00000504781 MUSTN1Q8IVN3 82 aa6.74□□□□□ -1.33
DDX41-203ENST00000504781 Q9HAA7 133 aa6.74□□□□□ -1.33
DDX41-203ENST00000504781 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
DDX41-203ENST00000504781 NBDYA0A0U1RRE5 68 aa6.73□□□□□ -1.33
DDX41-203ENST00000504781 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
DDX41-203ENST00000504781 ALMS1Q8TCU4 4167 aa6.73□□□□□ -1.33
DDX41-203ENST00000504781 BIRC6Q9NR09 4857 aa6.72□□□□□ -1.33
DDX41-203ENST00000504781 A0A1B0GWB2 263 aa6.72□□□□□ -1.33
DDX41-203ENST00000504781 EREGO14944 169 aa6.72□□□□□ -1.33
DDX41-203ENST00000504781 LINC00158P58513 81 aa6.72□□□□□ -1.33
DDX41-203ENST00000504781 C2orf82Q6UX34 121 aa6.72□□□□□ -1.33
DDX41-203ENST00000504781 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
DDX41-203ENST00000504781 PLECQ15149 4684 aaKnown RBP6.71□□□□□ -1.33
DDX41-203ENST00000504781 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.34
DDX41-203ENST00000504781 LOC107984156A0A0G2JMH3 177 aa6.71□□□□□ -1.34
DDX41-203ENST00000504781 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.34
DDX41-203ENST00000504781 FXYD2P54710 66 aa6.71□□□□□ -1.34
DDX41-203ENST00000504781 RNF151Q2KHN1 245 aa6.71□□□□□ -1.34
DDX41-203ENST00000504781 UNQ6190/PRO20217Q6UXQ8 127 aa6.71□□□□□ -1.34
DDX41-203ENST00000504781 ARL17AQ8IVW1 177 aa6.71□□□□□ -1.34
DDX41-203ENST00000504781 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
DDX41-203ENST00000504781 LINC00308Q8TCZ7 52 aa6.7□□□□□ -1.34
DDX41-203ENST00000504781 A4D1N5 150 aa6.69□□□□□ -1.34
DDX41-203ENST00000504781 PFN2P35080 140 aa6.69□□□□□ -1.34
DDX41-203ENST00000504781 C6orf223Q8N319 242 aa6.69□□□□□ -1.34
DDX41-203ENST00000504781 MIR7-3HGQ8N6C7 128 aa6.69□□□□□ -1.34
DDX41-203ENST00000504781 CAMK2N2Q96S95 79 aa6.69□□□□□ -1.34
DDX41-203ENST00000504781 USP17L23D6RBM5 183 aa6.68□□□□□ -1.34
DDX41-203ENST00000504781 PSCAO43653 123 aa6.68□□□□□ -1.34
DDX41-203ENST00000504781 CFC1BP0CG36 223 aa6.68□□□□□ -1.34
DDX41-203ENST00000504781 CFC1P0CG37 223 aa6.68□□□□□ -1.34
DDX41-203ENST00000504781 SYCNQ0VAF6 134 aa6.68□□□□□ -1.34
DDX41-203ENST00000504781 C14orf177Q52M58 125 aa6.68□□□□□ -1.34
DDX41-203ENST00000504781 KRTAP1-5Q9BYS1 174 aa6.68□□□□□ -1.34
DDX41-203ENST00000504781 NHP2Q9NX24 153 aaKnown RBP6.68□□□□□ -1.34
DDX41-203ENST00000504781 A0A0B4J2C4 111 aa6.67□□□□□ -1.34
DDX41-203ENST00000504781 A0A0U1RRA0 63 aa6.67□□□□□ -1.34
DDX41-203ENST00000504781 TAX1BP3O14907 124 aa6.67□□□□□ -1.34
DDX41-203ENST00000504781 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
DDX41-203ENST00000504781 C10orf25Q5T742 122 aa6.67□□□□□ -1.34
DDX41-203ENST00000504781 LINC00526Q96FQ7 95 aa6.67□□□□□ -1.34
DDX41-203ENST00000504781 PRO1854Q9UHT4 67 aa6.67□□□□□ -1.34
DDX41-203ENST00000504781 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
DDX41-203ENST00000504781 Q6ZR54 194 aa6.66□□□□□ -1.34
DDX41-203ENST00000504781 DAND5Q8N907 189 aa6.66□□□□□ -1.34
DDX41-203ENST00000504781 C6orf48Q9UBA6 75 aa6.66□□□□□ -1.34
DDX41-203ENST00000504781 KMT2AQ03164 3969 aa6.65□□□□□ -1.34
DDX41-203ENST00000504781 NDUFC2O95298 119 aa6.65□□□□□ -1.34
DDX41-203ENST00000504781 TLX1NBP0CAT3 122 aa6.65□□□□□ -1.34
DDX41-203ENST00000504781 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.34
DDX41-203ENST00000504781 Q6ZRU5 148 aa6.65□□□□□ -1.34
DDX41-203ENST00000504781 RAB37Q96AX2 223 aa6.65□□□□□ -1.34
DDX41-203ENST00000504781 NDUFC2-KCTD14E9PQ53 114 aa6.64□□□□□ -1.35
DDX41-203ENST00000504781 EIF4EBP3O60516 100 aaPredicted RBP6.64□□□□□ -1.35
DDX41-203ENST00000504781 C9orf116Q5BN46 136 aaPredicted RBP6.64□□□□□ -1.35
DDX41-203ENST00000504781 SND1-IT1Q9HBX3 110 aa6.64□□□□□ -1.35
DDX41-203ENST00000504781 TRAV13-2A0A0B4J235 113 aa6.63□□□□□ -1.35
DDX41-203ENST00000504781 LRCOL1A6NCL2 159 aa6.63□□□□□ -1.35
DDX41-203ENST00000504781 NPC2P61916 151 aa6.63□□□□□ -1.35
DDX41-203ENST00000504781 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
DDX41-203ENST00000504781 CARD19Q96LW7 228 aa6.63□□□□□ -1.35
DDX41-203ENST00000504781 M0R2N4 97 aa6.62□□□□□ -1.35
DDX41-203ENST00000504781 SLPIP03973 132 aa6.62□□□□□ -1.35
DDX41-203ENST00000504781 CNBPP62633 177 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms