RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 IGLV11-55A0A075B6I3 123 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 LINC01546A6NGU7 62 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 WT1-ASQ06250 92 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 DEFB116Q30KQ4 102 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 LINC01006Q8NI28 216 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 BDP1A6H8Y1 2624 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 CGB3P0DN86 165 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 ODF3L2Q3SX64 289 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 CREBBPQ92793 2442 aa4.3□□□□□ -1.72
CLCN3-204ENST00000504131 HTN3P15516 51 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 BRWD1-AS2P59051 145 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 ROMO1P60602 79 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 CGB7P0DN87 165 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 Q8N7P7 452 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 C11orf21Q9P2W6 132 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 TRBV6-4A0A1B0GX49 114 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 FAM215AQ9Y5M1 114 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 TRANK1O15050 2925 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 TSHBP01222 138 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 CHCHD7Q9BUK0 85 aa4.29□□□□□ -1.72
CLCN3-204ENST00000504131 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 LOC110117498A0A087WWA1 95 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 C17orf58Q2M2W7 97 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 C19orf73Q9NVV2 129 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 IGLV2-18A0A075B6J9 118 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 SRRM5B3KS81 715 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 IGLV1-51P01701 117 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 LY6EQ16553 131 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.28□□□□□ -1.72
CLCN3-204ENST00000504131 C16orf74Q96GX8 76 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 LINC00167Q96N53 147 aa4.28□□□□□ -1.72
CLCN3-204ENST00000504131 SORL1Q92673 2214 aa4.27□□□□□ -1.73
CLCN3-204ENST00000504131 F8W735 103 aaPredicted RBP4.27□□□□□ -1.73
CLCN3-204ENST00000504131 SHANK1Q9Y566 2161 aa4.27□□□□□ -1.73
CLCN3-204ENST00000504131 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
CLCN3-204ENST00000504131 NOTCH4Q99466 2003 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 IGLV7-43P04211 117 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 OTOGLQ3ZCN5 2332 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 PCNTO95613 3336 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 ARHGEF17Q96PE2 2063 aaPredicted RBP4.26□□□□□ -1.73
CLCN3-204ENST00000504131 SPINK7P58062 85 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 SPANXA2-OT1Q8N9U9 137 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 A8MU10 97 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 PTPRQQ9UMZ3 2332 aa4.26□□□□□ -1.73
CLCN3-204ENST00000504131 NUPR2A6NF83 97 aa4.25□□□□□ -1.73
CLCN3-204ENST00000504131 CCL18P55774 89 aa4.25□□□□□ -1.73
CLCN3-204ENST00000504131 USP34Q70CQ2 3546 aa4.25□□□□□ -1.73
CLCN3-204ENST00000504131 Q8NBF4 154 aa4.25□□□□□ -1.73
CLCN3-204ENST00000504131 ICE1Q9Y2F5 2266 aa4.25□□□□□ -1.73
CLCN3-204ENST00000504131 RTTNQ86VV8 2226 aa4.25□□□□□ -1.73
CLCN3-204ENST00000504131 TRGV1A0A0A0MS02 117 aa4.25□□□□□ -1.73
CLCN3-204ENST00000504131 CADP27708 2225 aa4.24□□□□□ -1.73
CLCN3-204ENST00000504131 C22orf24Q9Y442 160 aa4.24□□□□□ -1.73
CLCN3-204ENST00000504131 FAM208BQ5VWN6 2430 aa4.24□□□□□ -1.73
CLCN3-204ENST00000504131 IGKV1D-37A0A075B6S9 117 aa4.24□□□□□ -1.73
CLCN3-204ENST00000504131 CSNK1G2-AS1Q8NCQ2 148 aa4.24□□□□□ -1.73
CLCN3-204ENST00000504131 ACACBO00763 2458 aa4.24□□□□□ -1.73
CLCN3-204ENST00000504131 TNRC18O15417 2968 aaPredicted RBP4.24□□□□□ -1.73
CLCN3-204ENST00000504131 ADAMTS9Q9P2N4 1935 aa4.24□□□□□ -1.73
CLCN3-204ENST00000504131 CNFNQ9BYD5 112 aa4.24□□□□□ -1.73
CLCN3-204ENST00000504131 BRCA2P51587 3418 aa4.23□□□□□ -1.73
CLCN3-204ENST00000504131 KLK12Q9UKR0 248 aa4.23□□□□□ -1.73
CLCN3-204ENST00000504131 H3BUA1 57 aa4.23□□□□□ -1.73
CLCN3-204ENST00000504131 CRIPTQ9P021 101 aa4.23□□□□□ -1.73
CLCN3-204ENST00000504131 LINC00242Q5T6M2 205 aa4.23□□□□□ -1.73
CLCN3-204ENST00000504131 C6orf48Q9UBA6 75 aa4.23□□□□□ -1.73
CLCN3-204ENST00000504131 REV3LO60673 3130 aa4.23□□□□□ -1.73
CLCN3-204ENST00000504131 PRAC2D3DTV9 90 aa4.23□□□□□ -1.73
CLCN3-204ENST00000504131 C1orf229Q6ZS94 237 aaPredicted RBP4.23□□□□□ -1.73
CLCN3-204ENST00000504131 NBASA2RRP1 2371 aa4.22□□□□□ -1.73
CLCN3-204ENST00000504131 DNAH12Q6ZR08 3092 aa4.22□□□□□ -1.73
CLCN3-204ENST00000504131 SPTBN1Q01082 2364 aaKnown RBP4.22□□□□□ -1.73
CLCN3-204ENST00000504131 LY6G6DO95868 133 aa4.22□□□□□ -1.73
CLCN3-204ENST00000504131 IGLV10-54A0A075B6I4 117 aa4.22□□□□□ -1.73
CLCN3-204ENST00000504131 SRCAPQ6ZRS2 3230 aa4.22□□□□□ -1.73
CLCN3-204ENST00000504131 PTPRBP23467 1997 aa4.22□□□□□ -1.73
CLCN3-204ENST00000504131 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
CLCN3-204ENST00000504131 SPTAN1Q13813 2472 aaKnown RBP4.22□□□□□ -1.73
CLCN3-204ENST00000504131 CYSRT1A8MQ03 144 aa4.21□□□□□ -1.73
CLCN3-204ENST00000504131 C4orf3Q8WVX3 66 aa4.21□□□□□ -1.73
CLCN3-204ENST00000504131 CACNA1AO00555 2505 aa4.21□□□□□ -1.73
CLCN3-204ENST00000504131 IGLV5-52A0A0A0MRZ9 124 aa4.21□□□□□ -1.74
CLCN3-204ENST00000504131 RPL37AP61513 92 aaKnown RBP4.21□□□□□ -1.74
CLCN3-204ENST00000504131 CHD9Q3L8U1 2897 aa4.21□□□□□ -1.74
CLCN3-204ENST00000504131 DNAH10OSP0CZ25 163 aa4.21□□□□□ -1.74
CLCN3-204ENST00000504131 LYPD2Q6UXB3 125 aa4.21□□□□□ -1.74
CLCN3-204ENST00000504131 EML5Q05BV3 1969 aa4.21□□□□□ -1.74
CLCN3-204ENST00000504131 POLR2KP53803 58 aaKnown RBP4.21□□□□□ -1.74
CLCN3-204ENST00000504131 CIRBP-AS1Q8TBR5 109 aa4.21□□□□□ -1.74
CLCN3-204ENST00000504131 CLPSL2Q6UWE3 100 aa4.2□□□□□ -1.74
CLCN3-204ENST00000504131 NOTCH2Q04721 2471 aa4.2□□□□□ -1.74
CLCN3-204ENST00000504131 C10orf142B7Z368 130 aa4.2□□□□□ -1.74
CLCN3-204ENST00000504131 ARFGEF3Q5TH69 2177 aa4.2□□□□□ -1.74
CLCN3-204ENST00000504131 MUC4Q99102 2169 aa4.2□□□□□ -1.74
CLCN3-204ENST00000504131 H3BUX3 64 aa4.2□□□□□ -1.74
CLCN3-204ENST00000504131 I3L2K1 104 aa4.2□□□□□ -1.74
CLCN3-204ENST00000504131 IGLV1-50A0A075B6I6 118 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms