RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 C10orf25Q5T742 122 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 MYO9AB2RTY4 2548 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 CCDC179H3BU77 68 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 A0A1B0GUV1 79 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 RETNQ9HD89 108 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 Q8N9L7 120 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 NUPR2A6NF83 97 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 F8WDY8 70 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 K7ERS5 55 aa11.78□□□□□ -0.52
PCDHA1-203ENST00000504120 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
PCDHA1-203ENST00000504120 Q6ZSN1 163 aa11.78□□□□□ -0.52
PCDHA1-203ENST00000504120 A0A087WYN8 130 aa11.77□□□□□ -0.53
PCDHA1-203ENST00000504120 Q6ZTC4 211 aa11.77□□□□□ -0.53
PCDHA1-203ENST00000504120 REG3GQ6UW15 175 aa11.77□□□□□ -0.53
PCDHA1-203ENST00000504120 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
PCDHA1-203ENST00000504120 C6orf223Q8N319 242 aa11.76□□□□□ -0.53
PCDHA1-203ENST00000504120 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
PCDHA1-203ENST00000504120 PRR3P79522 188 aaKnown RBP11.75□□□□□ -0.53
PCDHA1-203ENST00000504120 CEP295Q9C0D2 2601 aa11.75□□□□□ -0.53
PCDHA1-203ENST00000504120 FAM30AQ9NZY2 134 aa11.75□□□□□ -0.53
PCDHA1-203ENST00000504120 TRAV7A0A075B6U4 112 aa11.74□□□□□ -0.53
PCDHA1-203ENST00000504120 ADAMTS20P59510 1910 aa11.73□□□□□ -0.53
PCDHA1-203ENST00000504120 C2orf48Q96LS8 159 aa11.73□□□□□ -0.53
PCDHA1-203ENST00000504120 PRR4Q16378 134 aa11.72□□□□□ -0.53
PCDHA1-203ENST00000504120 KIF25-AS1Q9Y6Z4 181 aa11.71□□□□□ -0.53
PCDHA1-203ENST00000504120 ANKRD11Q6UB99 2663 aaPredicted RBP11.71□□□□□ -0.53
PCDHA1-203ENST00000504120 RAI1Q7Z5J4 1906 aaPredicted RBP11.71□□□□□ -0.53
PCDHA1-203ENST00000504120 LYPD5Q6UWN5 251 aa11.7□□□□□ -0.54
PCDHA1-203ENST00000504120 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
PCDHA1-203ENST00000504120 LINC01546A6NGU7 62 aa11.67□□□□□ -0.54
PCDHA1-203ENST00000504120 PRYO14603 147 aa11.67□□□□□ -0.54
PCDHA1-203ENST00000504120 SERP1Q9Y6X1 66 aa11.67□□□□□ -0.54
PCDHA1-203ENST00000504120 Q8N2B8 174 aa11.67□□□□□ -0.54
PCDHA1-203ENST00000504120 A0A087WVE0 104 aa11.66□□□□□ -0.54
PCDHA1-203ENST00000504120 A0A0U1RQV1 116 aa11.66□□□□□ -0.54
PCDHA1-203ENST00000504120 A6NED7 52 aa11.66□□□□□ -0.54
PCDHA1-203ENST00000504120 SMIM26A0A096LP01 95 aa11.65□□□□□ -0.54
PCDHA1-203ENST00000504120 C11orf72Q8NBR9 251 aa11.65□□□□□ -0.54
PCDHA1-203ENST00000504120 CENPFP49454 3210 aa11.64□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC00575Q6W349 94 aa11.64□□□□□ -0.55
PCDHA1-203ENST00000504120 ESRGQ1W209 222 aa11.64□□□□□ -0.55
PCDHA1-203ENST00000504120 IGLV5-52A0A0A0MRZ9 124 aa11.63□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC00208Q96KT6 92 aa11.63□□□□□ -0.55
PCDHA1-203ENST00000504120 Q9BRP9 147 aa11.63□□□□□ -0.55
PCDHA1-203ENST00000504120 Q8N3U1 123 aa11.62□□□□□ -0.55
PCDHA1-203ENST00000504120 IGLV5-39A0A0G2JS06 123 aa11.62□□□□□ -0.55
PCDHA1-203ENST00000504120 FAM19A4Q96LR4 140 aa11.62□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC00337Q8N6G1 96 aa11.61□□□□□ -0.55
PCDHA1-203ENST00000504120 CIRBP-AS1Q8TBR5 109 aa11.6□□□□□ -0.55
PCDHA1-203ENST00000504120 Q6ZRU5 148 aa11.6□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC00315P59091 139 aa11.59□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC01547P58512 204 aaPredicted RBP11.59□□□□□ -0.55
PCDHA1-203ENST00000504120 DOPEY1Q5JWR5 2465 aa11.58□□□□□ -0.56
PCDHA1-203ENST00000504120 LINC01556Q5JQF7 62 aa11.58□□□□□ -0.56
PCDHA1-203ENST00000504120 IGHV6-1A0A0B4J1U7 121 aa11.57□□□□□ -0.56
PCDHA1-203ENST00000504120 A0A087WSZ3 146 aa11.57□□□□□ -0.56
PCDHA1-203ENST00000504120 Q6ZVQ6 151 aa11.57□□□□□ -0.56
PCDHA1-203ENST00000504120 IGHV3OR16-9A0A0B4J2B5 98 aa11.56□□□□□ -0.56
PCDHA1-203ENST00000504120 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
PCDHA1-203ENST00000504120 A8MTW9 85 aa11.54□□□□□ -0.56
PCDHA1-203ENST00000504120 FHL3Q13643 280 aa11.54□□□□□ -0.56
PCDHA1-203ENST00000504120 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
PCDHA1-203ENST00000504120 ABCA12Q86UK0 2595 aa11.53□□□□□ -0.56
PCDHA1-203ENST00000504120 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
PCDHA1-203ENST00000504120 SPTBN4Q9H254 2564 aa11.53□□□□□ -0.56
PCDHA1-203ENST00000504120 USP9XQ93008 2570 aaPredicted RBP11.51□□□□□ -0.57
PCDHA1-203ENST00000504120 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
PCDHA1-203ENST00000504120 TRBV7-7A0A0K0K1E9 115 aa11.51□□□□□ -0.57
PCDHA1-203ENST00000504120 NHLRC4P0CG21 123 aaPredicted RBP11.5□□□□□ -0.57
PCDHA1-203ENST00000504120 IGLV5-45A0A087WSX0 123 aa11.5□□□□□ -0.57
PCDHA1-203ENST00000504120 CXCL6P80162 114 aa11.5□□□□□ -0.57
PCDHA1-203ENST00000504120 TRBV7-6A0A0J9YX20 115 aa11.5□□□□□ -0.57
PCDHA1-203ENST00000504120 AGRNO00468 2067 aa11.49□□□□□ -0.57
PCDHA1-203ENST00000504120 HCG22E2RYF7 251 aa11.49□□□□□ -0.57
PCDHA1-203ENST00000504120 CHD8Q9HCK8 2581 aa11.48□□□□□ -0.57
PCDHA1-203ENST00000504120 PRLHP81277 87 aa11.48□□□□□ -0.57
PCDHA1-203ENST00000504120 H0Y9P7 68 aa11.48□□□□□ -0.57
PCDHA1-203ENST00000504120 TMEM254Q8TBM7 123 aa11.48□□□□□ -0.57
PCDHA1-203ENST00000504120 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
PCDHA1-203ENST00000504120 SMCR5Q8TEV8 140 aa11.47□□□□□ -0.57
PCDHA1-203ENST00000504120 CDIP1Q9H305 208 aa11.47□□□□□ -0.57
PCDHA1-203ENST00000504120 DEFB116Q30KQ4 102 aa11.45□□□□□ -0.58
PCDHA1-203ENST00000504120 TLN2Q9Y4G6 2542 aa11.45□□□□□ -0.58
PCDHA1-203ENST00000504120 PCSK5Q92824 1860 aa11.45□□□□□ -0.58
PCDHA1-203ENST00000504120 H3BNG1 76 aa11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 USP9YO00507 2555 aaPredicted RBP11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 C1orf195Q5TG92 126 aa11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 PTPRBP23467 1997 aa11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 KIAA0087Q14695 138 aa11.43□□□□□ -0.58
PCDHA1-203ENST00000504120 C6orf48Q9UBA6 75 aa11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 ZFYVE26Q68DK2 2539 aa11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 FN1P02751 2386 aaKnown RBP11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 hDV103S1A0JD37 113 aa11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 LIMD2Q9BT23 127 aa11.41□□□□□ -0.58
PCDHA1-203ENST00000504120 X6R8D5 127 aa11.41□□□□□ -0.58
PCDHA1-203ENST00000504120 TET2Q6N021 2002 aaPredicted RBP11.39□□□□□ -0.59
PCDHA1-203ENST00000504120 KLK9Q2XQG4 91 aa11.39□□□□□ -0.59
PCDHA1-203ENST00000504120 LINC00167Q96N53 147 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms