RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 C10orf25Q5T742 122 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 MYO9AB2RTY4 2548 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 CCDC179H3BU77 68 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 A0A1B0GUV1 79 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 RETNQ9HD89 108 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 Q8N9L7 120 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 NUPR2A6NF83 97 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 F8WDY8 70 aa11.79□□□□□ -0.52
PCDHA1-203ENST00000504120 K7ERS5 55 aa11.78□□□□□ -0.52
PCDHA1-203ENST00000504120 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
PCDHA1-203ENST00000504120 Q6ZSN1 163 aa11.78□□□□□ -0.52
PCDHA1-203ENST00000504120 A0A087WYN8 130 aa11.77□□□□□ -0.53
PCDHA1-203ENST00000504120 Q6ZTC4 211 aa11.77□□□□□ -0.53
PCDHA1-203ENST00000504120 REG3GQ6UW15 175 aa11.77□□□□□ -0.53
PCDHA1-203ENST00000504120 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
PCDHA1-203ENST00000504120 C6orf223Q8N319 242 aa11.76□□□□□ -0.53
PCDHA1-203ENST00000504120 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
PCDHA1-203ENST00000504120 PRR3P79522 188 aaKnown RBP11.75□□□□□ -0.53
PCDHA1-203ENST00000504120 CEP295Q9C0D2 2601 aa11.75□□□□□ -0.53
PCDHA1-203ENST00000504120 FAM30AQ9NZY2 134 aa11.75□□□□□ -0.53
PCDHA1-203ENST00000504120 TRAV7A0A075B6U4 112 aa11.74□□□□□ -0.53
PCDHA1-203ENST00000504120 ADAMTS20P59510 1910 aa11.73□□□□□ -0.53
PCDHA1-203ENST00000504120 C2orf48Q96LS8 159 aa11.73□□□□□ -0.53
PCDHA1-203ENST00000504120 PRR4Q16378 134 aa11.72□□□□□ -0.53
PCDHA1-203ENST00000504120 KIF25-AS1Q9Y6Z4 181 aa11.71□□□□□ -0.53
PCDHA1-203ENST00000504120 ANKRD11Q6UB99 2663 aaPredicted RBP11.71□□□□□ -0.53
PCDHA1-203ENST00000504120 RAI1Q7Z5J4 1906 aaPredicted RBP11.71□□□□□ -0.53
PCDHA1-203ENST00000504120 LYPD5Q6UWN5 251 aa11.7□□□□□ -0.54
PCDHA1-203ENST00000504120 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
PCDHA1-203ENST00000504120 LINC01546A6NGU7 62 aa11.67□□□□□ -0.54
PCDHA1-203ENST00000504120 PRYO14603 147 aa11.67□□□□□ -0.54
PCDHA1-203ENST00000504120 SERP1Q9Y6X1 66 aa11.67□□□□□ -0.54
PCDHA1-203ENST00000504120 Q8N2B8 174 aa11.67□□□□□ -0.54
PCDHA1-203ENST00000504120 A0A087WVE0 104 aa11.66□□□□□ -0.54
PCDHA1-203ENST00000504120 A0A0U1RQV1 116 aa11.66□□□□□ -0.54
PCDHA1-203ENST00000504120 A6NED7 52 aa11.66□□□□□ -0.54
PCDHA1-203ENST00000504120 SMIM26A0A096LP01 95 aa11.65□□□□□ -0.54
PCDHA1-203ENST00000504120 C11orf72Q8NBR9 251 aa11.65□□□□□ -0.54
PCDHA1-203ENST00000504120 CENPFP49454 3210 aa11.64□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC00575Q6W349 94 aa11.64□□□□□ -0.55
PCDHA1-203ENST00000504120 ESRGQ1W209 222 aa11.64□□□□□ -0.55
PCDHA1-203ENST00000504120 IGLV5-52A0A0A0MRZ9 124 aa11.63□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC00208Q96KT6 92 aa11.63□□□□□ -0.55
PCDHA1-203ENST00000504120 Q9BRP9 147 aa11.63□□□□□ -0.55
PCDHA1-203ENST00000504120 Q8N3U1 123 aa11.62□□□□□ -0.55
PCDHA1-203ENST00000504120 IGLV5-39A0A0G2JS06 123 aa11.62□□□□□ -0.55
PCDHA1-203ENST00000504120 FAM19A4Q96LR4 140 aa11.62□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC00337Q8N6G1 96 aa11.61□□□□□ -0.55
PCDHA1-203ENST00000504120 CIRBP-AS1Q8TBR5 109 aa11.6□□□□□ -0.55
PCDHA1-203ENST00000504120 Q6ZRU5 148 aa11.6□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC00315P59091 139 aa11.59□□□□□ -0.55
PCDHA1-203ENST00000504120 LINC01547P58512 204 aaPredicted RBP11.59□□□□□ -0.55
PCDHA1-203ENST00000504120 DOPEY1Q5JWR5 2465 aa11.58□□□□□ -0.56
PCDHA1-203ENST00000504120 LINC01556Q5JQF7 62 aa11.58□□□□□ -0.56
PCDHA1-203ENST00000504120 IGHV6-1A0A0B4J1U7 121 aa11.57□□□□□ -0.56
PCDHA1-203ENST00000504120 A0A087WSZ3 146 aa11.57□□□□□ -0.56
PCDHA1-203ENST00000504120 Q6ZVQ6 151 aa11.57□□□□□ -0.56
PCDHA1-203ENST00000504120 IGHV3OR16-9A0A0B4J2B5 98 aa11.56□□□□□ -0.56
PCDHA1-203ENST00000504120 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
PCDHA1-203ENST00000504120 A8MTW9 85 aa11.54□□□□□ -0.56
PCDHA1-203ENST00000504120 FHL3Q13643 280 aa11.54□□□□□ -0.56
PCDHA1-203ENST00000504120 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
PCDHA1-203ENST00000504120 ABCA12Q86UK0 2595 aa11.53□□□□□ -0.56
PCDHA1-203ENST00000504120 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
PCDHA1-203ENST00000504120 SPTBN4Q9H254 2564 aa11.53□□□□□ -0.56
PCDHA1-203ENST00000504120 USP9XQ93008 2570 aaPredicted RBP11.51□□□□□ -0.57
PCDHA1-203ENST00000504120 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
PCDHA1-203ENST00000504120 TRBV7-7A0A0K0K1E9 115 aa11.51□□□□□ -0.57
PCDHA1-203ENST00000504120 NHLRC4P0CG21 123 aaPredicted RBP11.5□□□□□ -0.57
PCDHA1-203ENST00000504120 IGLV5-45A0A087WSX0 123 aa11.5□□□□□ -0.57
PCDHA1-203ENST00000504120 CXCL6P80162 114 aa11.5□□□□□ -0.57
PCDHA1-203ENST00000504120 TRBV7-6A0A0J9YX20 115 aa11.5□□□□□ -0.57
PCDHA1-203ENST00000504120 AGRNO00468 2067 aa11.49□□□□□ -0.57
PCDHA1-203ENST00000504120 HCG22E2RYF7 251 aa11.49□□□□□ -0.57
PCDHA1-203ENST00000504120 CHD8Q9HCK8 2581 aa11.48□□□□□ -0.57
PCDHA1-203ENST00000504120 PRLHP81277 87 aa11.48□□□□□ -0.57
PCDHA1-203ENST00000504120 H0Y9P7 68 aa11.48□□□□□ -0.57
PCDHA1-203ENST00000504120 TMEM254Q8TBM7 123 aa11.48□□□□□ -0.57
PCDHA1-203ENST00000504120 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
PCDHA1-203ENST00000504120 SMCR5Q8TEV8 140 aa11.47□□□□□ -0.57
PCDHA1-203ENST00000504120 CDIP1Q9H305 208 aa11.47□□□□□ -0.57
PCDHA1-203ENST00000504120 DEFB116Q30KQ4 102 aa11.45□□□□□ -0.58
PCDHA1-203ENST00000504120 TLN2Q9Y4G6 2542 aa11.45□□□□□ -0.58
PCDHA1-203ENST00000504120 PCSK5Q92824 1860 aa11.45□□□□□ -0.58
PCDHA1-203ENST00000504120 H3BNG1 76 aa11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 USP9YO00507 2555 aaPredicted RBP11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 C1orf195Q5TG92 126 aa11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 PTPRBP23467 1997 aa11.44□□□□□ -0.58
PCDHA1-203ENST00000504120 KIAA0087Q14695 138 aa11.43□□□□□ -0.58
PCDHA1-203ENST00000504120 C6orf48Q9UBA6 75 aa11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 ZFYVE26Q68DK2 2539 aa11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 FN1P02751 2386 aaKnown RBP11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 hDV103S1A0JD37 113 aa11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
PCDHA1-203ENST00000504120 LIMD2Q9BT23 127 aa11.41□□□□□ -0.58
PCDHA1-203ENST00000504120 X6R8D5 127 aa11.41□□□□□ -0.58
PCDHA1-203ENST00000504120 TET2Q6N021 2002 aaPredicted RBP11.39□□□□□ -0.59
PCDHA1-203ENST00000504120 KLK9Q2XQG4 91 aa11.39□□□□□ -0.59
PCDHA1-203ENST00000504120 LINC00167Q96N53 147 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms