RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 SHPRHQ149N8 1683 aa1.58□□□□□ -2.16
GYPA-203ENST00000503627 CFAP74Q9C0B2 1584 aa1.57□□□□□ -2.16
GYPA-203ENST00000503627 IGLC2P0DOY2 106 aa1.57□□□□□ -2.16
GYPA-203ENST00000503627 IGLC3P0DOY3 106 aa1.57□□□□□ -2.16
GYPA-203ENST00000503627 DEFA5Q01523 94 aa1.57□□□□□ -2.16
GYPA-203ENST00000503627 SMCO4Q9NRQ5 59 aa1.57□□□□□ -2.16
GYPA-203ENST00000503627 NHSL1Q5SYE7 1610 aa1.57□□□□□ -2.16
GYPA-203ENST00000503627 ASH1LQ9NR48 2969 aaKnown RBP1.57□□□□□ -2.16
GYPA-203ENST00000503627 LTN1O94822 1766 aa1.57□□□□□ -2.16
GYPA-203ENST00000503627 LAMC1P11047 1609 aa1.56□□□□□ -2.16
GYPA-203ENST00000503627 PLGLAQ15195 96 aa1.56□□□□□ -2.16
GYPA-203ENST00000503627 FAM103A1Q9BTL3 118 aaKnown RBP1.56□□□□□ -2.16
GYPA-203ENST00000503627 RGPD8O14715 1765 aaPredicted RBP1.56□□□□□ -2.16
GYPA-203ENST00000503627 RGPD5Q99666 1765 aa1.56□□□□□ -2.16
GYPA-203ENST00000503627 ANKARQ7Z5J8 1434 aa1.56□□□□□ -2.16
GYPA-203ENST00000503627 CCDC141Q6ZP82 1450 aa1.56□□□□□ -2.16
GYPA-203ENST00000503627 KCPQ6ZWJ8 1503 aa1.56□□□□□ -2.16
GYPA-203ENST00000503627 IQGAP3Q86VI3 1631 aa1.55□□□□□ -2.16
GYPA-203ENST00000503627 PTPN23Q9H3S7 1636 aa1.55□□□□□ -2.16
GYPA-203ENST00000503627 MYO5CQ9NQX4 1742 aa1.55□□□□□ -2.16
GYPA-203ENST00000503627 SCN11AQ9UI33 1791 aa1.55□□□□□ -2.16
GYPA-203ENST00000503627 GNGT1P63211 74 aa1.55□□□□□ -2.16
GYPA-203ENST00000503627 KMT2BQ9UMN6 2715 aaPredicted RBP1.55□□□□□ -2.16
GYPA-203ENST00000503627 ABCC1P33527 1531 aa1.55□□□□□ -2.16
GYPA-203ENST00000503627 ABCA8O94911 1581 aa1.55□□□□□ -2.16
GYPA-203ENST00000503627 ERCC6L2Q5T890 1561 aa1.55□□□□□ -2.16
GYPA-203ENST00000503627 TARBP1Q13395 1621 aaKnown RBP1.55□□□□□ -2.16
GYPA-203ENST00000503627 CEBPZOSA8MTT3 80 aa1.54□□□□□ -2.16
GYPA-203ENST00000503627 C6orf201Q7Z4U5 140 aa1.54□□□□□ -2.16
GYPA-203ENST00000503627 ERICH3Q5RHP9 1530 aa1.54□□□□□ -2.16
GYPA-203ENST00000503627 ZC3H13Q5T200 1668 aaKnown RBP1.54□□□□□ -2.16
GYPA-203ENST00000503627 PKD1L3Q7Z443 1732 aa1.54□□□□□ -2.16
GYPA-203ENST00000503627 ANKRD36A6QL64 1941 aa1.53□□□□□ -2.16
GYPA-203ENST00000503627 PAPPA2Q9BXP8 1791 aa1.53□□□□□ -2.16
GYPA-203ENST00000503627 TRIOBPQ9H2D6 2365 aa1.53□□□□□ -2.16
GYPA-203ENST00000503627 UGGT2Q9NYU1 1516 aa1.53□□□□□ -2.16
GYPA-203ENST00000503627 XRN1Q8IZH2 1706 aaKnown RBP1.52□□□□□ -2.17
GYPA-203ENST00000503627 ALKQ9UM73 1620 aa1.52□□□□□ -2.17
GYPA-203ENST00000503627 ADAMTS12P58397 1594 aa1.52□□□□□ -2.17
GYPA-203ENST00000503627 PDCD5O14737 125 aa1.52□□□□□ -2.17
GYPA-203ENST00000503627 CFDP00746 253 aaPredicted RBP1.52□□□□□ -2.17
GYPA-203ENST00000503627 RGPD2P0DJD1 1756 aa1.52□□□□□ -2.17
GYPA-203ENST00000503627 CLIP1P30622 1438 aa1.51□□□□□ -2.17
GYPA-203ENST00000503627 A0A1B0GU69 56 aa1.51□□□□□ -2.17
GYPA-203ENST00000503627 S100A3P33764 101 aa1.51□□□□□ -2.17
GYPA-203ENST00000503627 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
GYPA-203ENST00000503627 C18orf32Q8TCD1 76 aa1.51□□□□□ -2.17
GYPA-203ENST00000503627 ZNF462Q96JM2 2506 aa1.5□□□□□ -2.17
GYPA-203ENST00000503627 LRRC9Q6ZRR7 1453 aa1.5□□□□□ -2.17
GYPA-203ENST00000503627 AHCTF1Q8WYP5 2266 aa1.5□□□□□ -2.17
GYPA-203ENST00000503627 LINC00959A0A1B0GUT2 108 aa1.49□□□□□ -2.17
GYPA-203ENST00000503627 SMIM31A0A1B0GVY4 71 aa1.49□□□□□ -2.17
GYPA-203ENST00000503627 SAMD9Q5K651 1589 aa1.49□□□□□ -2.17
GYPA-203ENST00000503627 NCOA2Q15596 1464 aa1.49□□□□□ -2.17
GYPA-203ENST00000503627 OTOGLQ3ZCN5 2332 aa1.48□□□□□ -2.17
GYPA-203ENST00000503627 SMIM13P0DJ93 91 aa1.48□□□□□ -2.17
GYPA-203ENST00000503627 DEFB121Q5J5C9 76 aa1.48□□□□□ -2.17
GYPA-203ENST00000503627 ATP7BP35670 1465 aa1.48□□□□□ -2.17
GYPA-203ENST00000503627 FAM208BQ5VWN6 2430 aa1.48□□□□□ -2.17
GYPA-203ENST00000503627 PIK3C2BO00750 1634 aa1.48□□□□□ -2.17
GYPA-203ENST00000503627 KIAA0556O60303 1618 aa1.48□□□□□ -2.17
GYPA-203ENST00000503627 ARFGEF2Q9Y6D5 1785 aa1.47□□□□□ -2.17
GYPA-203ENST00000503627 TULP4Q9NRJ4 1543 aa1.47□□□□□ -2.17
GYPA-203ENST00000503627 A0A0D9SFI3 127 aa1.47□□□□□ -2.17
GYPA-203ENST00000503627 A0A1B0GUT8 65 aa1.47□□□□□ -2.17
GYPA-203ENST00000503627 I3L2K1 104 aa1.47□□□□□ -2.17
GYPA-203ENST00000503627 ANKRD17O75179 2603 aaKnown RBP1.46□□□□□ -2.18
GYPA-203ENST00000503627 MROH1Q8NDA8 1641 aa1.46□□□□□ -2.18
GYPA-203ENST00000503627 A0A087WXM4 84 aa1.45□□□□□ -2.18
GYPA-203ENST00000503627 TRBV7-4A0A0J9YYF1 115 aa1.45□□□□□ -2.18
GYPA-203ENST00000503627 CNFNQ9BYD5 112 aa1.45□□□□□ -2.18
GYPA-203ENST00000503627 TP53AIP1Q9HCN2 124 aa1.45□□□□□ -2.18
GYPA-203ENST00000503627 SLIT1O75093 1534 aa1.45□□□□□ -2.18
GYPA-203ENST00000503627 GOLGA4Q13439 2230 aaKnown RBP1.44□□□□□ -2.18
GYPA-203ENST00000503627 A0A0G2JMZ2 1700 aa1.44□□□□□ -2.18
GYPA-203ENST00000503627 PRB3Q04118 309 aaPredicted RBP1.44□□□□□ -2.18
GYPA-203ENST00000503627 NKTRP30414 1462 aaKnown RBP1.43□□□□□ -2.18
GYPA-203ENST00000503627 RGPD1P0DJD0 1748 aa1.43□□□□□ -2.18
GYPA-203ENST00000503627 UMAD1C9J7I0 102 aa1.43□□□□□ -2.18
GYPA-203ENST00000503627 COX6A2Q02221 97 aa1.43□□□□□ -2.18
GYPA-203ENST00000503627 Q5BKY6 102 aa1.43□□□□□ -2.18
GYPA-203ENST00000503627 ATP5EP2Q5VTU8 51 aa1.43□□□□□ -2.18
GYPA-203ENST00000503627 URB2Q14146 1524 aaKnown RBP1.43□□□□□ -2.18
GYPA-203ENST00000503627 LRRC7Q96NW7 1537 aa1.43□□□□□ -2.18
GYPA-203ENST00000503627 DUOX2Q9NRD8 1548 aa1.43□□□□□ -2.18
GYPA-203ENST00000503627 DEFB112Q30KQ8 113 aa1.42□□□□□ -2.18
GYPA-203ENST00000503627 HEPN1Q6WQI6 88 aa1.42□□□□□ -2.18
GYPA-203ENST00000503627 CEP170BQ9Y4F5 1589 aaPredicted RBP1.42□□□□□ -2.18
GYPA-203ENST00000503627 ZNF831Q5JPB2 1677 aa1.41□□□□□ -2.18
GYPA-203ENST00000503627 ITSN1Q15811 1721 aa1.4□□□□□ -2.18
GYPA-203ENST00000503627 WFDC9Q8NEX5 89 aa1.4□□□□□ -2.19
GYPA-203ENST00000503627 PAPPAQ13219 1627 aa1.4□□□□□ -2.19
GYPA-203ENST00000503627 MADDQ8WXG6 1647 aa1.4□□□□□ -2.19
GYPA-203ENST00000503627 COL14A1Q05707 1796 aaKnown RBP1.39□□□□□ -2.19
GYPA-203ENST00000503627 INO80Q9ULG1 1556 aaPredicted RBP1.39□□□□□ -2.19
GYPA-203ENST00000503627 IFI27P40305 119 aaPredicted RBP1.39□□□□□ -2.19
GYPA-203ENST00000503627 PRO0255Q9UI72 69 aa1.39□□□□□ -2.19
GYPA-203ENST00000503627 MAGI3Q5TCQ9 1506 aa1.39□□□□□ -2.19
GYPA-203ENST00000503627 CFAP43Q8NDM7 1665 aa1.39□□□□□ -2.19
GYPA-203ENST00000503627 POLR1AO95602 1720 aaPredicted RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms