RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 KRTAP9-2Q9BYQ4 174 aa9.69□□□□□ -0.86
MUC1-220ENST00000498431 SERF1AO75920 110 aa9.68□□□□□ -0.86
MUC1-220ENST00000498431 KRTAP1-4P0C5Y4 121 aa9.68□□□□□ -0.86
MUC1-220ENST00000498431 MRPS36P82909 103 aaKnown RBP9.68□□□□□ -0.86
MUC1-220ENST00000498431 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
MUC1-220ENST00000498431 A0A087WZ39 114 aa9.67□□□□□ -0.86
MUC1-220ENST00000498431 HSBP1O75506 76 aa9.67□□□□□ -0.86
MUC1-220ENST00000498431 HBDP02042 147 aa9.67□□□□□ -0.86
MUC1-220ENST00000498431 Q6ZUT4 128 aa9.67□□□□□ -0.86
MUC1-220ENST00000498431 SCGB3A1Q96QR1 104 aa9.67□□□□□ -0.86
MUC1-220ENST00000498431 IGIPA6NJ69 53 aa9.66□□□□□ -0.86
MUC1-220ENST00000498431 NPSP0C0P6 89 aa9.66□□□□□ -0.86
MUC1-220ENST00000498431 PMCHL1Q16048 86 aa9.66□□□□□ -0.86
MUC1-220ENST00000498431 RNF151Q2KHN1 245 aa9.66□□□□□ -0.86
MUC1-220ENST00000498431 ERASQ7Z444 233 aa9.66□□□□□ -0.86
MUC1-220ENST00000498431 IGLV4-3A0A075B6K6 122 aa9.65□□□□□ -0.86
MUC1-220ENST00000498431 A0A096LNJ9 63 aa9.65□□□□□ -0.86
MUC1-220ENST00000498431 LINC00310P59036 64 aa9.65□□□□□ -0.86
MUC1-220ENST00000498431 PRR4Q16378 134 aa9.65□□□□□ -0.86
MUC1-220ENST00000498431 PAPPA-AS1Q5QFB9 102 aa9.65□□□□□ -0.86
MUC1-220ENST00000498431 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
MUC1-220ENST00000498431 TMEM141Q96I45 108 aa9.65□□□□□ -0.86
MUC1-220ENST00000498431 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
MUC1-220ENST00000498431 IGLV1-50A0A075B6I6 118 aa9.64□□□□□ -0.87
MUC1-220ENST00000498431 NDUFA6P56556 154 aa9.64□□□□□ -0.87
MUC1-220ENST00000498431 PDZD11Q5EBL8 140 aa9.64□□□□□ -0.87
MUC1-220ENST00000498431 Q6ZN92 141 aa9.64□□□□□ -0.87
MUC1-220ENST00000498431 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
MUC1-220ENST00000498431 KRTAP7-1Q8IUC3 87 aa9.64□□□□□ -0.87
MUC1-220ENST00000498431 FAM104AQ969W3 186 aa9.64□□□□□ -0.87
MUC1-220ENST00000498431 NUPR1O60356 82 aa9.63□□□□□ -0.87
MUC1-220ENST00000498431 FAM19A2Q8N3H0 131 aa9.63□□□□□ -0.87
MUC1-220ENST00000498431 VCX2Q9H322 139 aa9.63□□□□□ -0.87
MUC1-220ENST00000498431 MRPL35Q9NZE8 188 aaKnown RBP9.63□□□□□ -0.87
MUC1-220ENST00000498431 ATP5LO75964 103 aa9.62□□□□□ -0.87
MUC1-220ENST00000498431 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
MUC1-220ENST00000498431 TEX43Q6ZNM6 134 aa9.62□□□□□ -0.87
MUC1-220ENST00000498431 OR10D4PQ8NGN7 298 aa9.62□□□□□ -0.87
MUC1-220ENST00000498431 ORAOV1Q8WV07 137 aa9.62□□□□□ -0.87
MUC1-220ENST00000498431 IFITM10A6NMD0 228 aa9.61□□□□□ -0.87
MUC1-220ENST00000498431 UNQ6190/PRO20217Q6UXQ8 127 aa9.61□□□□□ -0.87
MUC1-220ENST00000498431 AMELXQ99217 191 aa9.61□□□□□ -0.87
MUC1-220ENST00000498431 C2orf88Q9BSF0 95 aa9.61□□□□□ -0.87
MUC1-220ENST00000498431 FAT4Q6V0I7 4981 aa9.61□□□□□ -0.87
MUC1-220ENST00000498431 GAGE2EQ4V326 116 aa9.6□□□□□ -0.87
MUC1-220ENST00000498431 C6orf48Q9UBA6 75 aa9.6□□□□□ -0.87
MUC1-220ENST00000498431 GAGE2DQ9UEU5 116 aa9.6□□□□□ -0.87
MUC1-220ENST00000498431 IGHV3OR16-9A0A0B4J2B5 98 aa9.59□□□□□ -0.87
MUC1-220ENST00000498431 NDUFA1O15239 70 aa9.59□□□□□ -0.87
MUC1-220ENST00000498431 TLX1NBP0CAT3 122 aa9.59□□□□□ -0.87
MUC1-220ENST00000498431 LEPROTL1O95214 131 aa9.58□□□□□ -0.88
MUC1-220ENST00000498431 UBE2D1P51668 147 aa9.58□□□□□ -0.88
MUC1-220ENST00000498431 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
MUC1-220ENST00000498431 IFI27L1Q96BM0 104 aa9.58□□□□□ -0.88
MUC1-220ENST00000498431 M0QXV9 152 aa9.57□□□□□ -0.88
MUC1-220ENST00000498431 PMVKQ15126 192 aa9.57□□□□□ -0.88
MUC1-220ENST00000498431 ZC2HC1BQ5TFG8 222 aa9.57□□□□□ -0.88
MUC1-220ENST00000498431 CST9LQ9H4G1 147 aa9.57□□□□□ -0.88
MUC1-220ENST00000498431 HSPB8Q9UJY1 196 aa9.57□□□□□ -0.88
MUC1-220ENST00000498431 F8WDY8 70 aa9.56□□□□□ -0.88
MUC1-220ENST00000498431 S100A6P06703 90 aa9.56□□□□□ -0.88
MUC1-220ENST00000498431 FABP4P15090 132 aa9.56□□□□□ -0.88
MUC1-220ENST00000498431 UBE2BP63146 152 aa9.56□□□□□ -0.88
MUC1-220ENST00000498431 A0A0U1RQV1 116 aa9.55□□□□□ -0.88
MUC1-220ENST00000498431 RPL13AP40429 203 aaKnown RBP9.55□□□□□ -0.88
MUC1-220ENST00000498431 SEC11AP67812 179 aa9.55□□□□□ -0.88
MUC1-220ENST00000498431 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
MUC1-220ENST00000498431 PACRGQ96M98 296 aaPredicted RBP9.55□□□□□ -0.88
MUC1-220ENST00000498431 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
MUC1-220ENST00000498431 LINC00242Q5T6M2 205 aa9.54□□□□□ -0.88
MUC1-220ENST00000498431 TSPAN13O95857 204 aa9.53□□□□□ -0.88
MUC1-220ENST00000498431 C9orf129Q5T035 196 aaKnown RBP9.53□□□□□ -0.88
MUC1-220ENST00000498431 FAM19A3Q7Z5A8 133 aa9.53□□□□□ -0.88
MUC1-220ENST00000498431 TRAV12-1A0A0B4J245 112 aa9.52□□□□□ -0.89
MUC1-220ENST00000498431 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
MUC1-220ENST00000498431 GEMIN7Q9H840 131 aaKnown RBP9.52□□□□□ -0.89
MUC1-220ENST00000498431 HERVK_113P63121 156 aa9.51□□□□□ -0.89
MUC1-220ENST00000498431 MAP1LC3CQ9BXW4 147 aa9.51□□□□□ -0.89
MUC1-220ENST00000498431 TINCRA0A1B0GVN0 87 aa9.5□□□□□ -0.89
MUC1-220ENST00000498431 S100A2P29034 98 aa9.5□□□□□ -0.89
MUC1-220ENST00000498431 HIST3H2BBQ8N257 126 aa9.5□□□□□ -0.89
MUC1-220ENST00000498431 CHTOPQ9Y3Y2 248 aaKnown RBP9.5□□□□□ -0.89
MUC1-220ENST00000498431 H0Y8G0 127 aa9.49□□□□□ -0.89
MUC1-220ENST00000498431 ZNF861PO60384 105 aa9.49□□□□□ -0.89
MUC1-220ENST00000498431 IGLC3P0DOY3 106 aa9.49□□□□□ -0.89
MUC1-220ENST00000498431 SNRPEP62304 92 aaKnown RBP9.49□□□□□ -0.89
MUC1-220ENST00000498431 TRBV30A0A0K0K1B3 111 aa9.48□□□□□ -0.89
MUC1-220ENST00000498431 C5orf52A6NGY3 159 aa9.48□□□□□ -0.89
MUC1-220ENST00000498431 NDUFC2-KCTD14E9PQ53 114 aa9.48□□□□□ -0.89
MUC1-220ENST00000498431 A0A087X002 238 aa9.47□□□□□ -0.89
MUC1-220ENST00000498431 KRTAP9-6A0A140TA67 174 aa9.47□□□□□ -0.89
MUC1-220ENST00000498431 F8VRH5 84 aa9.47□□□□□ -0.89
MUC1-220ENST00000498431 SYS1-DBNDD2H3BUS1 97 aa9.47□□□□□ -0.89
MUC1-220ENST00000498431 LINC01561Q8N1V8 128 aa9.47□□□□□ -0.89
MUC1-220ENST00000498431 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.9
MUC1-220ENST00000498431 LINC00469Q8N7U9 141 aa9.46□□□□□ -0.9
MUC1-220ENST00000498431 HIST1H2BLQ99880 126 aa9.46□□□□□ -0.9
MUC1-220ENST00000498431 CDKN2A-AS1Q9UH64 79 aa9.46□□□□□ -0.9
MUC1-220ENST00000498431 TMA7Q9Y2S6 64 aaKnown RBP9.46□□□□□ -0.9
MUC1-220ENST00000498431 MUC17Q685J3 4493 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms