RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 IBA57-AS1B1ANH7 110 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 FOXA3P55318 350 aaPredicted RBP3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 UBE2D3P61077 147 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 UBE2D2P62837 147 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 SYCNQ0VAF6 134 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 PEA15Q15121 130 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 RHEBQ15382 184 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 FAM104BQ5XKR9 115 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 OR10AG1Q8NH19 301 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 ATP6V0E2Q8NHE4 81 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 PLEKHB2Q96CS7 222 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 GNG13Q9P2W3 67 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 PHLDA3Q9Y5J5 127 aa3.78□□□□□ -1.8
TMEM39A-212ENST00000497993 TRBV7-3A0A075B6L6 115 aa3.77□□□□□ -1.81
TMEM39A-212ENST00000497993 A0A1B0GW54 56 aa3.77□□□□□ -1.81
TMEM39A-212ENST00000497993 F2Z2F3 143 aa3.77□□□□□ -1.81
TMEM39A-212ENST00000497993 LST1O00453 97 aa3.77□□□□□ -1.81
TMEM39A-212ENST00000497993 EVI2AP22794 236 aa3.77□□□□□ -1.81
TMEM39A-212ENST00000497993 ALKAL2Q6UX46 152 aa3.77□□□□□ -1.81
TMEM39A-212ENST00000497993 SCXQ7RTU7 201 aa3.77□□□□□ -1.81
TMEM39A-212ENST00000497993 A0A087WTM6 91 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 GRIFINA4D1Z8 144 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 LRCOL1A6NCL2 159 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 A8MUN3 132 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 GNG4P50150 75 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 CIRBP-AS1Q8TBR5 109 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 AP1S3Q96PC3 154 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 LAMTOR3Q9UHA4 124 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 FAT1Q14517 4588 aa3.76□□□□□ -1.81
TMEM39A-212ENST00000497993 TRAV9-1A0A075B6T8 112 aa3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 SRP19P09132 144 aaKnown RBP3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 SMIM17P0DL12 118 aa3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 PKIAP61925 76 aa3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 Q6Q795 121 aa3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 AMN1Q8IY45 258 aa3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 DMBT1Q9UGM3 2413 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 VPS13BQ7Z7G8 4022 aa3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 FLG2Q5D862 2391 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-212ENST00000497993 TRBV6-8A0A0A6YYG3 113 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 IGHV3-73A0A0B4J1V6 119 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 C16orf90A8MZG2 172 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 M0QY20 66 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 TRGC1P0CF51 173 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 IQCJQ1A5X6 159 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 SPANXN1Q5VSR9 72 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 SPATA12Q7Z6I5 190 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 SVBPQ8N300 66 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 NUP35Q8NFH5 326 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 TOMM6Q96B49 74 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 GFRA4Q9GZZ7 299 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 PRR34Q9NV39 138 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 PCLOQ9Y6V0 5065 aa3.74□□□□□ -1.81
TMEM39A-212ENST00000497993 TMSB15BA0A087X1C1 80 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 CKS1BP61024 79 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 FAM74A4Q5TZK3 123 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 LYRM7Q5U5X0 104 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 Q6ZSA8 131 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 IMUPQ9GZP8 106 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 TMEM126AQ9H061 195 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 DPH3P1Q9H4G8 78 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 OSTCQ9NRP0 149 aa3.73□□□□□ -1.81
TMEM39A-212ENST00000497993 TRBV6-5A0A0K0K1A5 114 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 GZMBP10144 247 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 Q0VG73 95 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 ELOBQ15370 118 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 ZNF56Q15929 161 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 KRTAP26-1Q6PEX3 210 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 RASL11AQ6T310 242 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 LYZL1Q6UWQ5 148 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 Q8N814 137 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 SEC11CQ9BY50 192 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 CYSLTR1Q9Y271 337 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 V9GYV3 84 aa3.72□□□□□ -1.81
TMEM39A-212ENST00000497993 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 J3KT08 172 aa3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 NCR2O95944 276 aa3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 NTF3P20783 257 aa3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 RPS10P46783 165 aaKnown RBP3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 C14orf177Q52M58 125 aa3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 TSKUQ8WUA8 353 aa3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 SMIM7Q9BQ49 75 aa3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 NIT2Q9NQR4 276 aa3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 SRRM2Q9UQ35 2752 aaKnown RBP3.71□□□□□ -1.82
TMEM39A-212ENST00000497993 TRBV25-1A0A075B6N4 114 aa3.7□□□□□ -1.82
TMEM39A-212ENST00000497993 A0A1B0GX51 115 aa3.7□□□□□ -1.82
TMEM39A-212ENST00000497993 MIAQ16674 131 aa3.7□□□□□ -1.82
TMEM39A-212ENST00000497993 ENHOQ6UWT2 76 aa3.7□□□□□ -1.82
TMEM39A-212ENST00000497993 OR5A1Q8NGJ0 315 aa3.7□□□□□ -1.82
TMEM39A-212ENST00000497993 TMEM191AQ9H0A3 160 aa3.7□□□□□ -1.82
TMEM39A-212ENST00000497993 LAMTOR2Q9Y2Q5 125 aa3.7□□□□□ -1.82
TMEM39A-212ENST00000497993 A0A087WX48 190 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 IGHV1-24A0A0C4DH33 117 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 MUC21A0A0G2JKD1 596 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 MUC21A0A140T8X8 626 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 A0A1B0GUT8 65 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 SMIM27A0A1W2PRY6 76 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 ZNF727A8MUV8 499 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 HIGD1CA8MV81 97 aa3.69□□□□□ -1.82
TMEM39A-212ENST00000497993 F8W036 122 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms