RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 IGSF10Q6WRI0 2623 aa9.01□□□□□ -0.97
VEGFA-215ENST00000497139 TMEM254Q8TBM7 123 aa9□□□□□ -0.97
VEGFA-215ENST00000497139 SPTAN1Q13813 2472 aaKnown RBP9□□□□□ -0.97
VEGFA-215ENST00000497139 C10orf99Q6UWK7 81 aa9□□□□□ -0.97
VEGFA-215ENST00000497139 NREPQ16612 68 aa8.99□□□□□ -0.97
VEGFA-215ENST00000497139 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
VEGFA-215ENST00000497139 DYNLRB2Q8TF09 96 aa8.99□□□□□ -0.97
VEGFA-215ENST00000497139 CFAP46Q8IYW2 2715 aa8.98□□□□□ -0.97
VEGFA-215ENST00000497139 IGLV4-60A0A075B6I1 120 aa8.98□□□□□ -0.97
VEGFA-215ENST00000497139 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
VEGFA-215ENST00000497139 LINC00959A0A1B0GUT2 108 aa8.98□□□□□ -0.97
VEGFA-215ENST00000497139 C6orf99Q4VX62 202 aa8.98□□□□□ -0.97
VEGFA-215ENST00000497139 C1orf158Q8N1D5 194 aa8.98□□□□□ -0.97
VEGFA-215ENST00000497139 RNASE1P07998 156 aaKnown RBP8.97□□□□□ -0.97
VEGFA-215ENST00000497139 IGKV3OR2-268A0A0C4DH90 116 aa8.97□□□□□ -0.97
VEGFA-215ENST00000497139 ESRGQ1W209 222 aa8.97□□□□□ -0.97
VEGFA-215ENST00000497139 MUC7Q8TAX7 377 aa8.97□□□□□ -0.97
VEGFA-215ENST00000497139 IGHV4-61A0A0C4DH41 118 aa8.96□□□□□ -0.97
VEGFA-215ENST00000497139 ABCA2Q9BZC7 2435 aa8.96□□□□□ -0.98
VEGFA-215ENST00000497139 A0A0U1RQV1 116 aa8.96□□□□□ -0.98
VEGFA-215ENST00000497139 PLAC8L1A1L4L8 177 aa8.95□□□□□ -0.98
VEGFA-215ENST00000497139 C19orf84I3L1E1 186 aa8.95□□□□□ -0.98
VEGFA-215ENST00000497139 MSMBP08118 114 aa8.95□□□□□ -0.98
VEGFA-215ENST00000497139 BPY2O14599 106 aa8.95□□□□□ -0.98
VEGFA-215ENST00000497139 PRYO14603 147 aa8.95□□□□□ -0.98
VEGFA-215ENST00000497139 C11orf68Q9H3H3 251 aaKnown RBP8.95□□□□□ -0.98
VEGFA-215ENST00000497139 PRR15Q8IV56 129 aa8.94□□□□□ -0.98
VEGFA-215ENST00000497139 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
VEGFA-215ENST00000497139 M0R2N4 97 aa8.94□□□□□ -0.98
VEGFA-215ENST00000497139 SLURP1P55000 103 aa8.94□□□□□ -0.98
VEGFA-215ENST00000497139 SORL1Q92673 2214 aa8.93□□□□□ -0.98
VEGFA-215ENST00000497139 GNLYP22749 145 aa8.93□□□□□ -0.98
VEGFA-215ENST00000497139 STHQ8IWL8 128 aa8.93□□□□□ -0.98
VEGFA-215ENST00000497139 IGHV4-59P01825 116 aa8.93□□□□□ -0.98
VEGFA-215ENST00000497139 FUSP35637 526 aaKnown RBP eCLIP8.93□□□□□ -0.983e-8■□□□□ 10.5
VEGFA-215ENST00000497139 AKAP6Q13023 2319 aa8.93□□□□□ -0.98
VEGFA-215ENST00000497139 IGHV4-31P0DP07 118 aa8.92□□□□□ -0.98
VEGFA-215ENST00000497139 PRR3P79522 188 aaKnown RBP8.92□□□□□ -0.98
VEGFA-215ENST00000497139 COL12A1Q99715 3063 aa8.92□□□□□ -0.98
VEGFA-215ENST00000497139 DEFB114Q30KQ6 69 aa8.92□□□□□ -0.98
VEGFA-215ENST00000497139 FAM229BQ4G0N7 80 aa8.92□□□□□ -0.98
VEGFA-215ENST00000497139 ZNF843Q8N446 348 aa8.92□□□□□ -0.98
VEGFA-215ENST00000497139 SPATA3Q8NHX4 192 aa8.92□□□□□ -0.98
VEGFA-215ENST00000497139 C16orf74Q96GX8 76 aa8.92□□□□□ -0.98
VEGFA-215ENST00000497139 PLA2G2AP14555 144 aa8.91□□□□□ -0.98
VEGFA-215ENST00000497139 A0A1B0GUV1 79 aa8.91□□□□□ -0.98
VEGFA-215ENST00000497139 MYO18BQ8IUG5 2567 aa8.91□□□□□ -0.98
VEGFA-215ENST00000497139 MPLKIPQ8TAP9 179 aa8.9□□□□□ -0.98
VEGFA-215ENST00000497139 NOP10Q9NPE3 64 aaKnown RBP8.9□□□□□ -0.98
VEGFA-215ENST00000497139 TRGV2A0A075B6R0 118 aa8.9□□□□□ -0.98
VEGFA-215ENST00000497139 LOC100131303A0A0U1RQF7 123 aa8.9□□□□□ -0.98
VEGFA-215ENST00000497139 Q6ZTC4 211 aa8.9□□□□□ -0.98
VEGFA-215ENST00000497139 FLNCQ14315 2725 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 DEFB112Q30KQ8 113 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 OCR1Q9BZK8 76 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 TRGV4A0A0C4DH28 118 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 ODF3L2Q3SX64 289 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
VEGFA-215ENST00000497139 Q6ZRU5 148 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 KIAA0087Q14695 138 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 Q6ZQY7 126 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 ZNF702PQ9H963 129 aa8.89□□□□□ -0.99
VEGFA-215ENST00000497139 ZNF462Q96JM2 2506 aa8.88□□□□□ -0.99
VEGFA-215ENST00000497139 B4DSR2 109 aa8.88□□□□□ -0.99
VEGFA-215ENST00000497139 IGHV4-30-2A0A087WSY4 118 aa8.88□□□□□ -0.99
VEGFA-215ENST00000497139 CCL24O00175 119 aa8.88□□□□□ -0.99
VEGFA-215ENST00000497139 IGLV6-57P01721 117 aa8.88□□□□□ -0.99
VEGFA-215ENST00000497139 C4orf3Q8WVX3 66 aa8.88□□□□□ -0.99
VEGFA-215ENST00000497139 CCL19Q99731 98 aa8.87□□□□□ -0.99
VEGFA-215ENST00000497139 PRB1P04280 392 aa8.87□□□□□ -0.99
VEGFA-215ENST00000497139 USP9XQ93008 2570 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-215ENST00000497139 COX7BP24311 80 aa8.86□□□□□ -0.99
VEGFA-215ENST00000497139 PMAIP1Q13794 54 aa8.86□□□□□ -0.99
VEGFA-215ENST00000497139 Q1T7F1 81 aa8.86□□□□□ -0.99
VEGFA-215ENST00000497139 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
VEGFA-215ENST00000497139 CD164L2Q6UWJ8 174 aa8.85□□□□□ -0.99
VEGFA-215ENST00000497139 SVEP1Q4LDE5 3571 aa8.85□□□□□ -0.99
VEGFA-215ENST00000497139 IGKV4-1P06312 121 aa8.84□□□□□ -0.99
VEGFA-215ENST00000497139 SCXQ7RTU7 201 aa8.84□□□□□ -0.99
VEGFA-215ENST00000497139 FAM208BQ5VWN6 2430 aa8.84□□□□□ -0.99
VEGFA-215ENST00000497139 ASH1LQ9NR48 2969 aaKnown RBP8.84□□□□□ -0.99
VEGFA-215ENST00000497139 hDV103S1A0JD37 113 aa8.83□□□□□ -1
VEGFA-215ENST00000497139 CMC4P56277 68 aaPredicted RBP8.83□□□□□ -1
VEGFA-215ENST00000497139 BBC3Q96PG8 261 aaPredicted RBP8.83□□□□□ -1
VEGFA-215ENST00000497139 C18orf65Q6ZTR6 163 aa8.82□□□□□ -1
VEGFA-215ENST00000497139 Q8NDZ9 215 aa8.82□□□□□ -1
VEGFA-215ENST00000497139 DIRC1Q969H9 104 aa8.82□□□□□ -1
VEGFA-215ENST00000497139 ZFHX3Q15911 3703 aa8.82□□□□□ -1
VEGFA-215ENST00000497139 LRRK2Q5S007 2527 aa8.81□□□□□ -1
VEGFA-215ENST00000497139 LCE6AA0A183 80 aa8.81□□□□□ -1
VEGFA-215ENST00000497139 UTP20O75691 2785 aaKnown RBP8.81□□□□□ -1
VEGFA-215ENST00000497139 SPG11Q96JI7 2443 aa8.8□□□□□ -1
VEGFA-215ENST00000497139 KHDC1LQ5JSQ8 128 aa8.8□□□□□ -1
VEGFA-215ENST00000497139 CHD6Q8TD26 2715 aa8.8□□□□□ -1
VEGFA-215ENST00000497139 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.8□□□□□ -11e-16■■■□□ 16
VEGFA-215ENST00000497139 Q6YL49 198 aa8.79□□□□□ -1
VEGFA-215ENST00000497139 ESM1Q9NQ30 184 aa8.79□□□□□ -1
VEGFA-215ENST00000497139 DOPEY1Q5JWR5 2465 aa8.79□□□□□ -1
VEGFA-215ENST00000497139 A0A0J9YWU9 116 aa8.78□□□□□ -1
VEGFA-215ENST00000497139 IGHV4-30-4P0DP06 118 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms