RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 PLAC8Q9NZF1 115 aa1.3□□□□□ -2.2
SOX2-OT-216ENST00000497122 ANKRD36A6QL64 1941 aa1.3□□□□□ -2.2
SOX2-OT-216ENST00000497122 NEXMIFQ5QGS0 1516 aa1.3□□□□□ -2.2
SOX2-OT-216ENST00000497122 MEGF8Q7Z7M0 2845 aa1.29□□□□□ -2.2
SOX2-OT-216ENST00000497122 XRN1Q8IZH2 1706 aaKnown RBP1.29□□□□□ -2.2
SOX2-OT-216ENST00000497122 LINC00643Q86TS7 51 aa1.28□□□□□ -2.2
SOX2-OT-216ENST00000497122 ST20Q9HBF5 79 aa1.28□□□□□ -2.2
SOX2-OT-216ENST00000497122 PAPPA2Q9BXP8 1791 aa1.27□□□□□ -2.21
SOX2-OT-216ENST00000497122 KIF14Q15058 1648 aa1.27□□□□□ -2.21
SOX2-OT-216ENST00000497122 MYMXA0A1B0GTQ4 84 aa1.27□□□□□ -2.21
SOX2-OT-216ENST00000497122 I3L2K1 104 aa1.27□□□□□ -2.21
SOX2-OT-216ENST00000497122 Q8IZM0 81 aa1.27□□□□□ -2.21
SOX2-OT-216ENST00000497122 GOLGA4Q13439 2230 aaKnown RBP1.27□□□□□ -2.21
SOX2-OT-216ENST00000497122 CRYBG1Q9Y4K1 1723 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 C5P01031 1676 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 SHPRHQ149N8 1683 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 KCPQ6ZWJ8 1503 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 FAM208BQ5VWN6 2430 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 ACYP1P07311 99 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 IGLC2P0DOY2 106 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 IGLC3P0DOY3 106 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 PLGLAQ15195 96 aa1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 TARBP1Q13395 1621 aaKnown RBP1.26□□□□□ -2.21
SOX2-OT-216ENST00000497122 UBE2D4Q9Y2X8 147 aa1.25□□□□□ -2.21
SOX2-OT-216ENST00000497122 CUX1P39880 1505 aa1.25□□□□□ -2.21
SOX2-OT-216ENST00000497122 PLCE1Q9P212 2302 aa1.24□□□□□ -2.21
SOX2-OT-216ENST00000497122 ARHGAP35Q9NRY4 1499 aa1.24□□□□□ -2.21
SOX2-OT-216ENST00000497122 TENM1Q9UKZ4 2725 aa1.24□□□□□ -2.21
SOX2-OT-216ENST00000497122 CACNA1HO95180 2353 aa1.23□□□□□ -2.21
SOX2-OT-216ENST00000497122 PAPPAQ13219 1627 aa1.23□□□□□ -2.21
SOX2-OT-216ENST00000497122 CEBPZOSA8MTT3 80 aa1.23□□□□□ -2.21
SOX2-OT-216ENST00000497122 SPINK6Q6UWN8 80 aa1.23□□□□□ -2.21
SOX2-OT-216ENST00000497122 KRTAP19-3Q7Z4W3 81 aa1.23□□□□□ -2.21
SOX2-OT-216ENST00000497122 A0A0G2JMZ2 1700 aa1.23□□□□□ -2.21
SOX2-OT-216ENST00000497122 SETBP1Q9Y6X0 1596 aa1.22□□□□□ -2.21
SOX2-OT-216ENST00000497122 A0A1B0GUT8 65 aa1.22□□□□□ -2.21
SOX2-OT-216ENST00000497122 DEFB112Q30KQ8 113 aa1.22□□□□□ -2.21
SOX2-OT-216ENST00000497122 ZNF469Q96JG9 3925 aaPredicted RBP1.21□□□□□ -2.22
SOX2-OT-216ENST00000497122 MAGI2Q86UL8 1455 aa1.21□□□□□ -2.22
SOX2-OT-216ENST00000497122 KIF20BQ96Q89 1820 aa1.2□□□□□ -2.22
SOX2-OT-216ENST00000497122 NHSL1Q5SYE7 1610 aa1.2□□□□□ -2.22
SOX2-OT-216ENST00000497122 MAP3K4Q9Y6R4 1608 aa1.2□□□□□ -2.22
SOX2-OT-216ENST00000497122 FRAS1Q86XX4 4008 aa1.2□□□□□ -2.22
SOX2-OT-216ENST00000497122 FBN2P35556 2912 aa1.19□□□□□ -2.22
SOX2-OT-216ENST00000497122 ERVK-7P63135 1459 aa1.19□□□□□ -2.22
SOX2-OT-216ENST00000497122 H3BUT2 72 aa1.19□□□□□ -2.22
SOX2-OT-216ENST00000497122 TULP4Q9NRJ4 1543 aa1.19□□□□□ -2.22
SOX2-OT-216ENST00000497122 TTC28Q96AY4 2481 aa1.18□□□□□ -2.22
SOX2-OT-216ENST00000497122 DOPEY2Q9Y3R5 2298 aa1.18□□□□□ -2.22
SOX2-OT-216ENST00000497122 CFDP00746 253 aaPredicted RBP1.17□□□□□ -2.22
SOX2-OT-216ENST00000497122 USMG5Q96IX5 58 aa1.17□□□□□ -2.22
SOX2-OT-216ENST00000497122 CRIPTQ9P021 101 aa1.17□□□□□ -2.22
SOX2-OT-216ENST00000497122 PKD1L3Q7Z443 1732 aa1.17□□□□□ -2.22
SOX2-OT-216ENST00000497122 SAMD9Q5K651 1589 aa1.17□□□□□ -2.22
SOX2-OT-216ENST00000497122 KIAA0556O60303 1618 aa1.16□□□□□ -2.22
SOX2-OT-216ENST00000497122 USF3Q68DE3 2245 aa1.15□□□□□ -2.23
SOX2-OT-216ENST00000497122 DEFB123Q8N688 67 aa1.15□□□□□ -2.23
SOX2-OT-216ENST00000497122 K7EQZ3 153 aa1.14□□□□□ -2.23
SOX2-OT-216ENST00000497122 COX6B1P14854 86 aa1.14□□□□□ -2.23
SOX2-OT-216ENST00000497122 BVES-AS1Q5T3Y7 98 aa1.14□□□□□ -2.23
SOX2-OT-216ENST00000497122 URB1O60287 2271 aaKnown RBP1.14□□□□□ -2.23
SOX2-OT-216ENST00000497122 BIVM-ERCC5R4GMW8 1640 aa1.14□□□□□ -2.23
SOX2-OT-216ENST00000497122 UBR3Q6ZT12 1888 aa1.14□□□□□ -2.23
SOX2-OT-216ENST00000497122 GAFA1Q96PS6 74 aa1.13□□□□□ -2.23
SOX2-OT-216ENST00000497122 DCAF1Q9Y4B6 1507 aa1.13□□□□□ -2.23
SOX2-OT-216ENST00000497122 APCP25054 2843 aa1.12□□□□□ -2.23
SOX2-OT-216ENST00000497122 TNCP24821 2201 aa1.12□□□□□ -2.23
SOX2-OT-216ENST00000497122 F8P00451 2351 aa1.12□□□□□ -2.23
SOX2-OT-216ENST00000497122 SLIT1O75093 1534 aa1.12□□□□□ -2.23
SOX2-OT-216ENST00000497122 WFDC9Q8NEX5 89 aa1.12□□□□□ -2.23
SOX2-OT-216ENST00000497122 DIP2BQ9P265 1576 aa1.12□□□□□ -2.23
SOX2-OT-216ENST00000497122 ATP7BP35670 1465 aa1.12□□□□□ -2.23
SOX2-OT-216ENST00000497122 CCDC141Q6ZP82 1450 aa1.12□□□□□ -2.23
SOX2-OT-216ENST00000497122 TMEM131LA2VDJ0 1609 aa1.11□□□□□ -2.23
SOX2-OT-216ENST00000497122 NOTCH1P46531 2555 aa1.11□□□□□ -2.23
SOX2-OT-216ENST00000497122 SPTY2D1-AS1A0A0U1RR47 76 aa1.11□□□□□ -2.23
SOX2-OT-216ENST00000497122 I3L3M4 83 aa1.11□□□□□ -2.23
SOX2-OT-216ENST00000497122 PRH1P02810 166 aa1.11□□□□□ -2.23
SOX2-OT-216ENST00000497122 COX8AP10176 69 aa1.11□□□□□ -2.23
SOX2-OT-216ENST00000497122 FXYD6Q9H0Q3 95 aa1.11□□□□□ -2.23
SOX2-OT-216ENST00000497122 KDM5DQ9BY66 1539 aa1.1□□□□□ -2.23
SOX2-OT-216ENST00000497122 C2CD3Q4AC94 2353 aa1.1□□□□□ -2.23
SOX2-OT-216ENST00000497122 TRAV21A0A0B4J279 112 aa1.1□□□□□ -2.23
SOX2-OT-216ENST00000497122 Q5BKY6 102 aa1.1□□□□□ -2.23
SOX2-OT-216ENST00000497122 SPTBN2O15020 2390 aa1.1□□□□□ -2.23
SOX2-OT-216ENST00000497122 RGPD2P0DJD1 1756 aa1.09□□□□□ -2.23
SOX2-OT-216ENST00000497122 COL14A1Q05707 1796 aaKnown RBP1.09□□□□□ -2.23
SOX2-OT-216ENST00000497122 ALKQ9UM73 1620 aa1.09□□□□□ -2.23
SOX2-OT-216ENST00000497122 FMN2Q9NZ56 1722 aa1.09□□□□□ -2.24
SOX2-OT-216ENST00000497122 ANK2Q01484 3957 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 A0A087WXM4 84 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 SPINK1P00995 79 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 COX7BP24311 80 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 LRRC37AA6NMS7 1700 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 LRRC7Q96NW7 1537 aa1.08□□□□□ -2.24
SOX2-OT-216ENST00000497122 ABCA12Q86UK0 2595 aa1.07□□□□□ -2.24
SOX2-OT-216ENST00000497122 CPSF4LA6NMK7 179 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms