RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 HERVK_113P63121 156 aa11.93□□□□□ -0.5
COL20A1-208ENST00000496810 RHEBQ15382 184 aa11.93□□□□□ -0.5
COL20A1-208ENST00000496810 PACRGQ96M98 296 aaPredicted RBP11.93□□□□□ -0.5
COL20A1-208ENST00000496810 M0QXV9 152 aa11.92□□□□□ -0.5
COL20A1-208ENST00000496810 PRSS2P07478 247 aa11.92□□□□□ -0.5
COL20A1-208ENST00000496810 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
COL20A1-208ENST00000496810 Q8IZM0 81 aa11.92□□□□□ -0.5
COL20A1-208ENST00000496810 LINC00469Q8N7U9 141 aa11.92□□□□□ -0.5
COL20A1-208ENST00000496810 GEMIN7Q9H840 131 aaKnown RBP11.92□□□□□ -0.5
COL20A1-208ENST00000496810 KRTAP10-8P60410 259 aa11.91□□□□□ -0.5
COL20A1-208ENST00000496810 FABP9Q0Z7S8 132 aa11.91□□□□□ -0.5
COL20A1-208ENST00000496810 PAPPA-AS1Q5QFB9 102 aa11.91□□□□□ -0.5
COL20A1-208ENST00000496810 SMIM1B2RUZ4 78 aa11.9□□□□□ -0.5
COL20A1-208ENST00000496810 G0S2P27469 103 aa11.9□□□□□ -0.5
COL20A1-208ENST00000496810 CKS1BP61024 79 aa11.9□□□□□ -0.5
COL20A1-208ENST00000496810 C6orf226Q5I0X4 101 aa11.89□□□□□ -0.51
COL20A1-208ENST00000496810 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
COL20A1-208ENST00000496810 A0A096LNJ9 63 aa11.88□□□□□ -0.51
COL20A1-208ENST00000496810 IGLV7-43P04211 117 aa11.88□□□□□ -0.51
COL20A1-208ENST00000496810 SEC11AP67812 179 aa11.88□□□□□ -0.51
COL20A1-208ENST00000496810 FA2HQ7L5A8 372 aa11.88□□□□□ -0.51
COL20A1-208ENST00000496810 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
COL20A1-208ENST00000496810 XAGE1AQ9HD64 81 aa11.88□□□□□ -0.51
COL20A1-208ENST00000496810 IGLV5-45A0A087WSX0 123 aa11.87□□□□□ -0.51
COL20A1-208ENST00000496810 COX19Q49B96 90 aa11.87□□□□□ -0.51
COL20A1-208ENST00000496810 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
COL20A1-208ENST00000496810 SMCO4Q9NRQ5 59 aa11.86□□□□□ -0.51
COL20A1-208ENST00000496810 F8VRH5 84 aa11.85□□□□□ -0.51
COL20A1-208ENST00000496810 SPINK8P0C7L1 97 aa11.85□□□□□ -0.51
COL20A1-208ENST00000496810 C18orf32Q8TCD1 76 aa11.85□□□□□ -0.51
COL20A1-208ENST00000496810 APOC3P02656 99 aa11.84□□□□□ -0.51
COL20A1-208ENST00000496810 UBE2BP63146 152 aa11.84□□□□□ -0.51
COL20A1-208ENST00000496810 PMVKQ15126 192 aa11.83□□□□□ -0.52
COL20A1-208ENST00000496810 PMCHL1Q16048 86 aa11.83□□□□□ -0.52
COL20A1-208ENST00000496810 COX7B2Q8TF08 81 aa11.83□□□□□ -0.52
COL20A1-208ENST00000496810 PDZD11Q5EBL8 140 aa11.82□□□□□ -0.52
COL20A1-208ENST00000496810 TRAPPC1Q9Y5R8 145 aa11.82□□□□□ -0.52
COL20A1-208ENST00000496810 LINC01549A6NIU2 74 aa11.8□□□□□ -0.52
COL20A1-208ENST00000496810 H0Y9J4 135 aa11.8□□□□□ -0.52
COL20A1-208ENST00000496810 CXCL5P42830 114 aa11.8□□□□□ -0.52
COL20A1-208ENST00000496810 DIRC1Q969H9 104 aa11.8□□□□□ -0.52
COL20A1-208ENST00000496810 C22orf24Q9Y442 160 aa11.8□□□□□ -0.52
COL20A1-208ENST00000496810 LPAP08519 4548 aa11.8□□□□□ -0.52
COL20A1-208ENST00000496810 PRR26Q8N8Z3 221 aa11.79□□□□□ -0.52
COL20A1-208ENST00000496810 KRTAP1-4P0C5Y4 121 aa11.78□□□□□ -0.52
COL20A1-208ENST00000496810 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
COL20A1-208ENST00000496810 YPEL4Q96NS1 127 aa11.78□□□□□ -0.52
COL20A1-208ENST00000496810 HBDP02042 147 aa11.77□□□□□ -0.53
COL20A1-208ENST00000496810 SNAPINO95295 136 aa11.76□□□□□ -0.53
COL20A1-208ENST00000496810 LINC00614P0C842 121 aa11.76□□□□□ -0.53
COL20A1-208ENST00000496810 ZNF22P17026 224 aaPredicted RBP11.76□□□□□ -0.53
COL20A1-208ENST00000496810 NDUFA6P56556 154 aa11.76□□□□□ -0.53
COL20A1-208ENST00000496810 SVBPQ8N300 66 aa11.76□□□□□ -0.53
COL20A1-208ENST00000496810 RAB5BP61020 215 aa11.75□□□□□ -0.53
COL20A1-208ENST00000496810 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
COL20A1-208ENST00000496810 NDUFA5Q16718 116 aa11.73□□□□□ -0.53
COL20A1-208ENST00000496810 MRPL55Q7Z7F7 128 aaKnown RBP11.73□□□□□ -0.53
COL20A1-208ENST00000496810 C11orf86A6NJI1 115 aa11.72□□□□□ -0.53
COL20A1-208ENST00000496810 H3BRM9 83 aa11.72□□□□□ -0.53
COL20A1-208ENST00000496810 TP73-AS1Q9UF72 201 aa11.71□□□□□ -0.53
COL20A1-208ENST00000496810 RNF213Q63HN8 5207 aa11.7□□□□□ -0.54
COL20A1-208ENST00000496810 GAGE10A6NGK3 116 aa11.7□□□□□ -0.54
COL20A1-208ENST00000496810 RPL37AP8A6NKH3 93 aa11.7□□□□□ -0.54
COL20A1-208ENST00000496810 SCO1O75880 301 aa11.7□□□□□ -0.54
COL20A1-208ENST00000496810 LBHQ53QV2 105 aaPredicted RBP11.69□□□□□ -0.54
COL20A1-208ENST00000496810 BAGE3Q86Y29 109 aa11.69□□□□□ -0.54
COL20A1-208ENST00000496810 CBLN2Q8IUK8 224 aa11.69□□□□□ -0.54
COL20A1-208ENST00000496810 LINC00167Q96N53 147 aa11.69□□□□□ -0.54
COL20A1-208ENST00000496810 ZNF861PO60384 105 aa11.68□□□□□ -0.54
COL20A1-208ENST00000496810 ATP5LO75964 103 aa11.68□□□□□ -0.54
COL20A1-208ENST00000496810 PFN2P35080 140 aa11.68□□□□□ -0.54
COL20A1-208ENST00000496810 NUPR1O60356 82 aa11.67□□□□□ -0.54
COL20A1-208ENST00000496810 IGLV5-37A0A075B6J1 123 aa11.66□□□□□ -0.54
COL20A1-208ENST00000496810 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
COL20A1-208ENST00000496810 IGLV1-50A0A075B6I6 118 aa11.65□□□□□ -0.54
COL20A1-208ENST00000496810 BCE1O60756 84 aa11.65□□□□□ -0.54
COL20A1-208ENST00000496810 Q8NDZ9 215 aa11.65□□□□□ -0.54
COL20A1-208ENST00000496810 TMEM170BQ5T4T1 132 aa11.64□□□□□ -0.55
COL20A1-208ENST00000496810 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
COL20A1-208ENST00000496810 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
COL20A1-208ENST00000496810 CHTOPQ9Y3Y2 248 aaKnown RBP11.63□□□□□ -0.55
COL20A1-208ENST00000496810 NKAPP1Q8N9T2 125 aa11.62□□□□□ -0.55
COL20A1-208ENST00000496810 IGKV2-28A0A075B6P5 120 aa11.61□□□□□ -0.55
COL20A1-208ENST00000496810 IGKV2D-28P01615 120 aa11.61□□□□□ -0.55
COL20A1-208ENST00000496810 VPREB1P12018 145 aa11.61□□□□□ -0.55
COL20A1-208ENST00000496810 CHCHD1Q96BP2 118 aaKnown RBP11.61□□□□□ -0.55
COL20A1-208ENST00000496810 KRTAP13-1Q8IUC0 172 aa11.6□□□□□ -0.55
COL20A1-208ENST00000496810 FAM19A2Q8N3H0 131 aa11.6□□□□□ -0.55
COL20A1-208ENST00000496810 IFI27L1Q96BM0 104 aa11.6□□□□□ -0.55
COL20A1-208ENST00000496810 A0A087X002 238 aa11.59□□□□□ -0.55
COL20A1-208ENST00000496810 RPL28P46779 137 aaKnown RBP11.59□□□□□ -0.55
COL20A1-208ENST00000496810 LINC00310P59036 64 aa11.59□□□□□ -0.55
COL20A1-208ENST00000496810 TMEM223A0PJW6 202 aa11.58□□□□□ -0.56
COL20A1-208ENST00000496810 TRAV12-1A0A0B4J245 112 aa11.57□□□□□ -0.56
COL20A1-208ENST00000496810 TRGC2P03986 189 aa11.57□□□□□ -0.56
COL20A1-208ENST00000496810 SLC7A5P1Q8MH63 180 aa11.57□□□□□ -0.56
COL20A1-208ENST00000496810 TMEM238C9JI98 176 aa11.56□□□□□ -0.56
COL20A1-208ENST00000496810 A0A0U1RRA0 63 aa11.55□□□□□ -0.56
COL20A1-208ENST00000496810 HSBP1O75506 76 aa11.55□□□□□ -0.56
COL20A1-208ENST00000496810 RPL13AP40429 203 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms