RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ATP6V0CP27449 155 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 CRIP1P50238 77 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 NDUFA6P56556 154 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 HERVK_113P61574 105 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 RPS28P62857 69 aaKnown RBP2.62□□□□□ -1.99
VPS52-222ENST00000495981 ZNF345Q14585 488 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 FAM74A4Q5TZK3 123 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 ALKAL2Q6UX46 152 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 C15orf56Q8N910 161 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 FER1L6-AS1Q8NA97 138 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 SPACA4Q8TDM5 124 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 AQP10Q96PS8 301 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 SPANXB1Q9NS25 103 aaPredicted RBP2.62□□□□□ -1.99
VPS52-222ENST00000495981 EPDR1Q9UM22 224 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 TNFSF18Q9UNG2 199 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 TRBV7-3A0A075B6L6 115 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 FAM240AA0A1B0GVK7 77 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 A0A1B0GX51 115 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 A0A1W2PRE2 83 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 C7orf77A4D0Y5 90 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 B4DEV8 164 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 ARMS2P0C7Q2 107 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 SEC11BP0C7V7 166 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 GNG4P50150 75 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 CNBPP62633 177 aaKnown RBP2.61□□□□□ -1.99
VPS52-222ENST00000495981 HSD52Q0P140 79 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 TMEM97Q5BJF2 176 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 FAM162BQ5T6X4 162 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 CLPSL2Q6UWE3 100 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 SDIM1Q6ZPB5 146 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 Q6ZRU5 148 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 NTM-AS1Q6ZSK4 140 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 OR10AG1Q8NH19 301 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 SCGB1C1Q8TD33 95 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 IMMP2LQ96T52 175 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 SMDT1Q9H4I9 107 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 TMEM167BQ9NRX6 74 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 NAT8BQ9UHF3 227 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 LAMTOR2Q9Y2Q5 125 aa2.61□□□□□ -1.99
VPS52-222ENST00000495981 TRBV6-1A0A0K0K1D8 114 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 GRIFINA4D1Z8 144 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 MAP1LC3B2A6NCE7 125 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 J3QR89 54 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 M0R381 172 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 ZNF861PO60384 105 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 CXorf1O96002 111 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 LTAP01374 205 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 CRPP02741 224 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 CXCL1P09341 107 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 TLX1NBP0CAT3 122 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 S100A4P26447 101 aaKnown RBP2.6□□□□□ -1.99
VPS52-222ENST00000495981 SULT1A2P50226 295 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 SMAGPQ0VAQ4 97 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 Q0VG73 95 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 MIAQ16674 131 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 MAP1LC3BQ9GZQ8 125 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 PLAC8Q9NZF1 115 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 KIF25-AS1Q9Y6Z4 181 aa2.6□□□□□ -1.99
VPS52-222ENST00000495981 SYNE2Q8WXH0 6885 aaKnown RBP2.6□□□□□ -1.99
VPS52-222ENST00000495981 TMSB15BA0A087X1C1 80 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 CTXND1A0A1B0GTU2 59 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 A0A1B0GVX0 72 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 FABP5P3A8MUU1 101 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.59□□□□□ -1.99
VPS52-222ENST00000495981 ANGP03950 147 aaKnown RBP2.59□□□□□ -1.99
VPS52-222ENST00000495981 RPL23P62829 140 aaKnown RBP2.59□□□□□ -1.99
VPS52-222ENST00000495981 SERF2P84101 59 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 MEF2BQ02080 365 aaPredicted RBP2.59□□□□□ -1.99
VPS52-222ENST00000495981 ELOBQ15370 118 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 ZNF56Q15929 161 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 ORMDL2Q53FV1 153 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 RPL7L1Q6DKI1 246 aaKnown RBP2.59□□□□□ -1.99
VPS52-222ENST00000495981 GTF2H5Q6ZYL4 71 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 KCNRGQ8N5I3 272 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 OR13C6PQ8NH95 151 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 FMC1Q96HJ9 113 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 BTF3L4Q96K17 158 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 TMEM243Q9BU79 118 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 TMEM242Q9NWH2 141 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 UQCR10Q9UDW1 63 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 PRO0628Q9UI54 55 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 PHLDA3Q9Y5J5 127 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 USH2AO75445 5202 aa2.59□□□□□ -1.99
VPS52-222ENST00000495981 IGLV4-60A0A075B6I1 120 aa2.58□□□□□ -2
VPS52-222ENST00000495981 TRBV24-1A0A075B6N3 115 aa2.58□□□□□ -2
VPS52-222ENST00000495981 TRAV8-4A0A0B4J246 113 aa2.58□□□□□ -2
VPS52-222ENST00000495981 MUC21A0A0G2JKD1 596 aa2.58□□□□□ -2
VPS52-222ENST00000495981 P01737 135 aa2.58□□□□□ -2
VPS52-222ENST00000495981 TPT1P13693 172 aaKnown RBP2.58□□□□□ -2
VPS52-222ENST00000495981 RPS10P46783 165 aaKnown RBP2.58□□□□□ -2
VPS52-222ENST00000495981 PMVKQ15126 192 aa2.58□□□□□ -2
VPS52-222ENST00000495981 C6orf99Q4VX62 202 aa2.58□□□□□ -2
VPS52-222ENST00000495981 MRPL54Q6P161 138 aaKnown RBP2.58□□□□□ -2
VPS52-222ENST00000495981 LINC00269Q8N2A0 174 aa2.58□□□□□ -2
VPS52-222ENST00000495981 OR5A1Q8NGJ0 315 aa2.58□□□□□ -2
VPS52-222ENST00000495981 LINC01600Q96MT4 127 aa2.58□□□□□ -2
VPS52-222ENST00000495981 AP1S3Q96PC3 154 aa2.58□□□□□ -2
VPS52-222ENST00000495981 TIMM17AQ99595 171 aa2.58□□□□□ -2
VPS52-222ENST00000495981 ZNF471Q9BX82 626 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms