RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 LINC00173Q6ZV60 143 aa7.87□□□□□ -1.15
MRPL55-233ENST00000495899 LINC01561Q8N1V8 128 aa7.87□□□□□ -1.15
MRPL55-233ENST00000495899 SCGB3A1Q96QR1 104 aa7.87□□□□□ -1.15
MRPL55-233ENST00000495899 CAMK2N2Q96S95 79 aa7.87□□□□□ -1.15
MRPL55-233ENST00000495899 FAT1Q14517 4588 aa7.87□□□□□ -1.15
MRPL55-233ENST00000495899 A0A087WYN8 130 aa7.86□□□□□ -1.15
MRPL55-233ENST00000495899 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
MRPL55-233ENST00000495899 SPAG11BQ08648 103 aa7.86□□□□□ -1.15
MRPL55-233ENST00000495899 COA6Q5JTJ3 125 aaKnown RBP7.86□□□□□ -1.15
MRPL55-233ENST00000495899 ORAOV1Q8WV07 137 aa7.86□□□□□ -1.15
MRPL55-233ENST00000495899 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
MRPL55-233ENST00000495899 ZC2HC1BQ5TFG8 222 aa7.85□□□□□ -1.15
MRPL55-233ENST00000495899 Q6ZRU5 148 aa7.85□□□□□ -1.15
MRPL55-233ENST00000495899 C18orf32Q8TCD1 76 aa7.85□□□□□ -1.15
MRPL55-233ENST00000495899 A0A096LNI7 61 aa7.84□□□□□ -1.15
MRPL55-233ENST00000495899 LOC107984640A0A0U1RRK4 108 aa7.84□□□□□ -1.15
MRPL55-233ENST00000495899 A4D1N5 150 aa7.84□□□□□ -1.15
MRPL55-233ENST00000495899 LINC00614P0C842 121 aa7.84□□□□□ -1.15
MRPL55-233ENST00000495899 HERVK_113P63121 156 aa7.84□□□□□ -1.15
MRPL55-233ENST00000495899 MAJINQ3KP22 176 aa7.84□□□□□ -1.15
MRPL55-233ENST00000495899 MRPL35Q9NZE8 188 aaKnown RBP7.84□□□□□ -1.15
MRPL55-233ENST00000495899 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
MRPL55-233ENST00000495899 NDUFA1O15239 70 aa7.83□□□□□ -1.16
MRPL55-233ENST00000495899 TRIAP1O43715 76 aa7.83□□□□□ -1.16
MRPL55-233ENST00000495899 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
MRPL55-233ENST00000495899 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
MRPL55-233ENST00000495899 KIAA0087Q14695 138 aa7.82□□□□□ -1.16
MRPL55-233ENST00000495899 HIST3H2BBQ8N257 126 aa7.82□□□□□ -1.16
MRPL55-233ENST00000495899 STPG4Q8N801 248 aa7.82□□□□□ -1.16
MRPL55-233ENST00000495899 CST9LQ9H4G1 147 aa7.82□□□□□ -1.16
MRPL55-233ENST00000495899 GEMIN7Q9H840 131 aaKnown RBP7.82□□□□□ -1.16
MRPL55-233ENST00000495899 VPS13BQ7Z7G8 4022 aa7.81□□□□□ -1.16
MRPL55-233ENST00000495899 S100A2P29034 98 aa7.81□□□□□ -1.16
MRPL55-233ENST00000495899 RPL37AP61513 92 aaKnown RBP7.81□□□□□ -1.16
MRPL55-233ENST00000495899 KRTAP19-1Q8IUB9 90 aa7.81□□□□□ -1.16
MRPL55-233ENST00000495899 URB1-AS1Q96HZ7 61 aa7.81□□□□□ -1.16
MRPL55-233ENST00000495899 A0A0J9YXV3 536 aa7.8□□□□□ -1.16
MRPL55-233ENST00000495899 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
MRPL55-233ENST00000495899 PMVKQ15126 192 aa7.8□□□□□ -1.16
MRPL55-233ENST00000495899 UNQ6190/PRO20217Q6UXQ8 127 aa7.8□□□□□ -1.16
MRPL55-233ENST00000495899 BAGE3Q86Y29 109 aa7.8□□□□□ -1.16
MRPL55-233ENST00000495899 C7orf33Q8WU49 177 aa7.8□□□□□ -1.16
MRPL55-233ENST00000495899 CDKN2A-AS1Q9UH64 79 aa7.8□□□□□ -1.16
MRPL55-233ENST00000495899 A0A096LNJ9 63 aa7.79□□□□□ -1.16
MRPL55-233ENST00000495899 HBDP02042 147 aa7.79□□□□□ -1.16
MRPL55-233ENST00000495899 PRSS2P07478 247 aa7.79□□□□□ -1.16
MRPL55-233ENST00000495899 TLX1NBP0CAT3 122 aa7.79□□□□□ -1.16
MRPL55-233ENST00000495899 GAGE2BQ13066 116 aa7.79□□□□□ -1.16
MRPL55-233ENST00000495899 PACRGQ96M98 296 aaPredicted RBP7.79□□□□□ -1.16
MRPL55-233ENST00000495899 IGLV5-45A0A087WSX0 123 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 TRBV30A0A0K0K1B3 111 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 NUPR1O60356 82 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 AKR1D1P51857 326 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 PDZD11Q5EBL8 140 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 C6orf226Q5I0X4 101 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 C10orf25Q5T742 122 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 Q8IZM0 81 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 CHCHD1Q96BP2 118 aaKnown RBP7.78□□□□□ -1.16
MRPL55-233ENST00000495899 KRTAP4-12Q9BQ66 201 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 C6orf48Q9UBA6 75 aa7.78□□□□□ -1.16
MRPL55-233ENST00000495899 SERF1AO75920 110 aa7.77□□□□□ -1.17
MRPL55-233ENST00000495899 ATP5LO75964 103 aa7.77□□□□□ -1.17
MRPL55-233ENST00000495899 CKS1BP61024 79 aa7.77□□□□□ -1.17
MRPL55-233ENST00000495899 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
MRPL55-233ENST00000495899 LINC00469Q8N7U9 141 aa7.77□□□□□ -1.17
MRPL55-233ENST00000495899 FABP4P15090 132 aa7.76□□□□□ -1.17
MRPL55-233ENST00000495899 C2orf82Q6UX34 121 aa7.76□□□□□ -1.17
MRPL55-233ENST00000495899 HIST1H2BLQ99880 126 aa7.76□□□□□ -1.17
MRPL55-233ENST00000495899 PMCHL1Q16048 86 aa7.75□□□□□ -1.17
MRPL55-233ENST00000495899 SERTAD4-AS1Q5TG53 156 aa7.75□□□□□ -1.17
MRPL55-233ENST00000495899 TOMM7Q9P0U1 55 aa7.75□□□□□ -1.17
MRPL55-233ENST00000495899 SMIM1B2RUZ4 78 aa7.74□□□□□ -1.17
MRPL55-233ENST00000495899 NDUFC2-KCTD14E9PQ53 114 aa7.74□□□□□ -1.17
MRPL55-233ENST00000495899 H3BRM9 83 aa7.74□□□□□ -1.17
MRPL55-233ENST00000495899 IGLC3P0DOY3 106 aa7.74□□□□□ -1.17
MRPL55-233ENST00000495899 CXCL5P42830 114 aa7.74□□□□□ -1.17
MRPL55-233ENST00000495899 Q6ZRP5 223 aa7.74□□□□□ -1.17
MRPL55-233ENST00000495899 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
MRPL55-233ENST00000495899 A0A1W2PNN7 141 aa7.73□□□□□ -1.17
MRPL55-233ENST00000495899 KRTAP29-1A8MX34 341 aaPredicted RBP7.73□□□□□ -1.17
MRPL55-233ENST00000495899 F8VRH5 84 aa7.73□□□□□ -1.17
MRPL55-233ENST00000495899 HSBP1O75506 76 aa7.73□□□□□ -1.17
MRPL55-233ENST00000495899 C9orf116Q5BN46 136 aaPredicted RBP7.73□□□□□ -1.17
MRPL55-233ENST00000495899 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
MRPL55-233ENST00000495899 MYCBP2O75592 4640 aa7.71□□□□□ -1.18
MRPL55-233ENST00000495899 OXTP01178 125 aa7.71□□□□□ -1.18
MRPL55-233ENST00000495899 PRR3P79522 188 aaKnown RBP7.71□□□□□ -1.18
MRPL55-233ENST00000495899 GAGE2EQ4V326 116 aa7.71□□□□□ -1.18
MRPL55-233ENST00000495899 GAGE2DQ9UEU5 116 aa7.71□□□□□ -1.18
MRPL55-233ENST00000495899 FLG2Q5D862 2391 aaPredicted RBP7.7□□□□□ -1.18
MRPL55-233ENST00000495899 SPINK8P0C7L1 97 aa7.7□□□□□ -1.18
MRPL55-233ENST00000495899 HNRNPA3P51991 378 aaKnown RBP7.7□□□□□ -1.18
MRPL55-233ENST00000495899 LINC00518Q8N0U6 118 aa7.7□□□□□ -1.18
MRPL55-233ENST00000495899 FAM19A2Q8N3H0 131 aa7.7□□□□□ -1.18
MRPL55-233ENST00000495899 IFI27L1Q96BM0 104 aa7.7□□□□□ -1.18
MRPL55-233ENST00000495899 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
MRPL55-233ENST00000495899 IGLV5-39A0A0G2JS06 123 aa7.69□□□□□ -1.18
MRPL55-233ENST00000495899 SMIM6P0DI80 62 aa7.69□□□□□ -1.18
MRPL55-233ENST00000495899 ZNF22P17026 224 aaPredicted RBP7.69□□□□□ -1.18
MRPL55-233ENST00000495899 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms