RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 A0A1B0GVG6 124 aa7.06□□□□□ -1.28
SHROOM1-206ENST00000495680 RPL37AP8A6NKH3 93 aa7.06□□□□□ -1.28
SHROOM1-206ENST00000495680 LBHQ53QV2 105 aaPredicted RBP7.06□□□□□ -1.28
SHROOM1-206ENST00000495680 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
SHROOM1-206ENST00000495680 FAM19A3Q7Z5A8 133 aa7.06□□□□□ -1.28
SHROOM1-206ENST00000495680 MRPL55Q7Z7F7 128 aaKnown RBP7.06□□□□□ -1.28
SHROOM1-206ENST00000495680 MUC17Q685J3 4493 aa7.06□□□□□ -1.28
SHROOM1-206ENST00000495680 BCE1O60756 84 aa7.05□□□□□ -1.28
SHROOM1-206ENST00000495680 LAMTOR2Q9Y2Q5 125 aa7.05□□□□□ -1.28
SHROOM1-206ENST00000495680 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
SHROOM1-206ENST00000495680 F8VRH5 84 aa7.04□□□□□ -1.28
SHROOM1-206ENST00000495680 RPL28P46779 137 aaKnown RBP7.04□□□□□ -1.28
SHROOM1-206ENST00000495680 KRTAP13-2Q52LG2 175 aa7.04□□□□□ -1.28
SHROOM1-206ENST00000495680 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
SHROOM1-206ENST00000495680 LINC00167Q96N53 147 aa7.04□□□□□ -1.28
SHROOM1-206ENST00000495680 RETNLBQ9BQ08 111 aa7.04□□□□□ -1.28
SHROOM1-206ENST00000495680 TP73-AS1Q9UF72 201 aa7.04□□□□□ -1.28
SHROOM1-206ENST00000495680 CRYGAP11844 174 aa7.03□□□□□ -1.28
SHROOM1-206ENST00000495680 ORMDL2Q53FV1 153 aa7.03□□□□□ -1.28
SHROOM1-206ENST00000495680 A0A0U1RQV1 116 aa7.02□□□□□ -1.29
SHROOM1-206ENST00000495680 SMIM1B2RUZ4 78 aa7.02□□□□□ -1.29
SHROOM1-206ENST00000495680 HERVK_113P63121 156 aa7.02□□□□□ -1.29
SHROOM1-206ENST00000495680 KRTAP13-1Q8IUC0 172 aa7.02□□□□□ -1.29
SHROOM1-206ENST00000495680 GEMIN7Q9H840 131 aaKnown RBP7.02□□□□□ -1.29
SHROOM1-206ENST00000495680 SCO1O75880 301 aa7.01□□□□□ -1.29
SHROOM1-206ENST00000495680 NPSP0C0P6 89 aa7.01□□□□□ -1.29
SHROOM1-206ENST00000495680 ADCYAP1P18509 176 aa7□□□□□ -1.29
SHROOM1-206ENST00000495680 TIMM17AQ99595 171 aa7□□□□□ -1.29
SHROOM1-206ENST00000495680 K7EMI3 77 aa6.99□□□□□ -1.29
SHROOM1-206ENST00000495680 CXCL5P42830 114 aa6.99□□□□□ -1.29
SHROOM1-206ENST00000495680 RAB5BP61020 215 aa6.99□□□□□ -1.29
SHROOM1-206ENST00000495680 KIAA1644Q3SXP7 199 aa6.99□□□□□ -1.29
SHROOM1-206ENST00000495680 COX7B2Q8TF08 81 aa6.99□□□□□ -1.29
SHROOM1-206ENST00000495680 TOMM6Q96B49 74 aa6.99□□□□□ -1.29
SHROOM1-206ENST00000495680 NXT2Q9NPJ8 142 aaKnown RBP6.99□□□□□ -1.29
SHROOM1-206ENST00000495680 IGLV5-37A0A075B6J1 123 aa6.98□□□□□ -1.29
SHROOM1-206ENST00000495680 SEC11AP67812 179 aa6.98□□□□□ -1.29
SHROOM1-206ENST00000495680 PNRC1Q12796 327 aaPredicted RBP6.98□□□□□ -1.29
SHROOM1-206ENST00000495680 IGLV5-45A0A087WSX0 123 aa6.97□□□□□ -1.29
SHROOM1-206ENST00000495680 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
SHROOM1-206ENST00000495680 UBE2AP49459 152 aa6.97□□□□□ -1.29
SHROOM1-206ENST00000495680 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
SHROOM1-206ENST00000495680 PAPPA-AS1Q5QFB9 102 aa6.97□□□□□ -1.29
SHROOM1-206ENST00000495680 LINC00304Q8N9R0 145 aa6.97□□□□□ -1.29
SHROOM1-206ENST00000495680 ANAPC16Q96DE5 110 aa6.97□□□□□ -1.29
SHROOM1-206ENST00000495680 IGKV2-28A0A075B6P5 120 aa6.96□□□□□ -1.3
SHROOM1-206ENST00000495680 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.3
SHROOM1-206ENST00000495680 IGKV2D-28P01615 120 aa6.96□□□□□ -1.3
SHROOM1-206ENST00000495680 MT-ND4LP03901 98 aa6.96□□□□□ -1.3
SHROOM1-206ENST00000495680 PRLHP81277 87 aa6.96□□□□□ -1.3
SHROOM1-206ENST00000495680 ERASQ7Z444 233 aa6.96□□□□□ -1.3
SHROOM1-206ENST00000495680 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
SHROOM1-206ENST00000495680 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
SHROOM1-206ENST00000495680 NKAPP1Q8N9T2 125 aa6.95□□□□□ -1.3
SHROOM1-206ENST00000495680 TMEM238C9JI98 176 aa6.94□□□□□ -1.3
SHROOM1-206ENST00000495680 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
SHROOM1-206ENST00000495680 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
SHROOM1-206ENST00000495680 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
SHROOM1-206ENST00000495680 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
SHROOM1-206ENST00000495680 Q8NDZ9 215 aa6.93□□□□□ -1.3
SHROOM1-206ENST00000495680 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
SHROOM1-206ENST00000495680 VPREB1P12018 145 aa6.92□□□□□ -1.3
SHROOM1-206ENST00000495680 G0S2P27469 103 aa6.92□□□□□ -1.3
SHROOM1-206ENST00000495680 PFN2P35080 140 aa6.92□□□□□ -1.3
SHROOM1-206ENST00000495680 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
SHROOM1-206ENST00000495680 IGKV2D-26A0A0A0MRZ7 120 aa6.91□□□□□ -1.3
SHROOM1-206ENST00000495680 LINC01546A6NGU7 62 aa6.91□□□□□ -1.3
SHROOM1-206ENST00000495680 FAM19A1Q7Z5A9 133 aa6.91□□□□□ -1.3
SHROOM1-206ENST00000495680 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
SHROOM1-206ENST00000495680 M0R378 163 aa6.9□□□□□ -1.3
SHROOM1-206ENST00000495680 ATP5LO75964 103 aa6.9□□□□□ -1.3
SHROOM1-206ENST00000495680 PMVKQ15126 192 aa6.9□□□□□ -1.3
SHROOM1-206ENST00000495680 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
SHROOM1-206ENST00000495680 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
SHROOM1-206ENST00000495680 PLEKHB2Q96CS7 222 aa6.89□□□□□ -1.31
SHROOM1-206ENST00000495680 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
SHROOM1-206ENST00000495680 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
SHROOM1-206ENST00000495680 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
SHROOM1-206ENST00000495680 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
SHROOM1-206ENST00000495680 IGLC3P0DOY3 106 aa6.87□□□□□ -1.31
SHROOM1-206ENST00000495680 ZNF22P17026 224 aaPredicted RBP6.87□□□□□ -1.31
SHROOM1-206ENST00000495680 RAB14P61106 215 aa6.87□□□□□ -1.31
SHROOM1-206ENST00000495680 A0A096LNJ9 63 aa6.86□□□□□ -1.31
SHROOM1-206ENST00000495680 H3BRM9 83 aa6.86□□□□□ -1.31
SHROOM1-206ENST00000495680 CBLN2Q8IUK8 224 aa6.86□□□□□ -1.31
SHROOM1-206ENST00000495680 HIGD2AQ9BW72 106 aa6.85□□□□□ -1.31
SHROOM1-206ENST00000495680 GNB1LQ9BYB4 327 aa6.85□□□□□ -1.31
SHROOM1-206ENST00000495680 NDUFA6P56556 154 aa6.84□□□□□ -1.31
SHROOM1-206ENST00000495680 FA2HQ7L5A8 372 aa6.84□□□□□ -1.31
SHROOM1-206ENST00000495680 URB1-AS1Q96HZ7 61 aa6.84□□□□□ -1.31
SHROOM1-206ENST00000495680 SPRR4Q96PI1 79 aa6.84□□□□□ -1.31
SHROOM1-206ENST00000495680 TRAV9-1A0A075B6T8 112 aa6.83□□□□□ -1.32
SHROOM1-206ENST00000495680 LINC01549A6NIU2 74 aa6.83□□□□□ -1.32
SHROOM1-206ENST00000495680 RPL24P83731 157 aaKnown RBP6.83□□□□□ -1.32
SHROOM1-206ENST00000495680 DAND5Q8N907 189 aa6.83□□□□□ -1.32
SHROOM1-206ENST00000495680 KRTAP4-1Q9BYQ7 146 aa6.83□□□□□ -1.32
SHROOM1-206ENST00000495680 SMCO4Q9NRQ5 59 aa6.83□□□□□ -1.32
SHROOM1-206ENST00000495680 C11orf86A6NJI1 115 aa6.82□□□□□ -1.32
SHROOM1-206ENST00000495680 CTAG1AP78358 180 aa6.82□□□□□ -1.32
SHROOM1-206ENST00000495680 PMCHL1Q16048 86 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms