RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 TCAPO15273 167 aa6.21□□□□□ -1.42
HLA-DOA-206ENST00000495532 IGKV2D-28P01615 120 aa6.21□□□□□ -1.42
HLA-DOA-206ENST00000495532 RAB14P61106 215 aa6.21□□□□□ -1.42
HLA-DOA-206ENST00000495532 C4orf48Q5BLP8 95 aa6.21□□□□□ -1.42
HLA-DOA-206ENST00000495532 C6orf226Q5I0X4 101 aa6.21□□□□□ -1.42
HLA-DOA-206ENST00000495532 C20orf78Q9BR46 151 aa6.21□□□□□ -1.42
HLA-DOA-206ENST00000495532 USH2AO75445 5202 aa6.21□□□□□ -1.42
HLA-DOA-206ENST00000495532 IGLV4-3A0A075B6K6 122 aa6.2□□□□□ -1.42
HLA-DOA-206ENST00000495532 TRBV24-1A0A075B6N3 115 aa6.2□□□□□ -1.42
HLA-DOA-206ENST00000495532 F8VRH5 84 aa6.2□□□□□ -1.42
HLA-DOA-206ENST00000495532 BLOC1S1P78537 153 aa6.2□□□□□ -1.42
HLA-DOA-206ENST00000495532 MRPL51Q4U2R6 128 aaKnown RBP6.2□□□□□ -1.42
HLA-DOA-206ENST00000495532 Q6ZN92 141 aa6.2□□□□□ -1.42
HLA-DOA-206ENST00000495532 Q8NBF4 154 aa6.2□□□□□ -1.42
HLA-DOA-206ENST00000495532 SCO1O75880 301 aa6.19□□□□□ -1.42
HLA-DOA-206ENST00000495532 SPINK1P00995 79 aa6.19□□□□□ -1.42
HLA-DOA-206ENST00000495532 IFI27P40305 119 aaPredicted RBP6.19□□□□□ -1.42
HLA-DOA-206ENST00000495532 FAM19A1Q7Z5A9 133 aa6.19□□□□□ -1.42
HLA-DOA-206ENST00000495532 ALKBH7Q9BT30 221 aaPredicted RBP6.19□□□□□ -1.42
HLA-DOA-206ENST00000495532 SMIM2Q9BVW6 85 aa6.19□□□□□ -1.42
HLA-DOA-206ENST00000495532 IGLV8-61A0A075B6I0 122 aa6.18□□□□□ -1.42
HLA-DOA-206ENST00000495532 TEX46H3BTG2 121 aa6.18□□□□□ -1.42
HLA-DOA-206ENST00000495532 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
HLA-DOA-206ENST00000495532 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
HLA-DOA-206ENST00000495532 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
HLA-DOA-206ENST00000495532 PYGO1Q9Y3Y4 419 aa6.18□□□□□ -1.42
HLA-DOA-206ENST00000495532 TMEM238C9JI98 176 aa6.17□□□□□ -1.42
HLA-DOA-206ENST00000495532 ATP6V1G1O75348 118 aa6.17□□□□□ -1.42
HLA-DOA-206ENST00000495532 S100A1P23297 94 aa6.17□□□□□ -1.42
HLA-DOA-206ENST00000495532 PCOTHQ58A44 107 aa6.17□□□□□ -1.42
HLA-DOA-206ENST00000495532 FAM104BQ5XKR9 115 aa6.17□□□□□ -1.42
HLA-DOA-206ENST00000495532 Q8N377 158 aa6.17□□□□□ -1.42
HLA-DOA-206ENST00000495532 TMEM141Q96I45 108 aa6.17□□□□□ -1.42
HLA-DOA-206ENST00000495532 SPRR4Q96PI1 79 aa6.17□□□□□ -1.42
HLA-DOA-206ENST00000495532 RIGQ13278 110 aa6.16□□□□□ -1.42
HLA-DOA-206ENST00000495532 ZC2HC1BQ5TFG8 222 aa6.16□□□□□ -1.42
HLA-DOA-206ENST00000495532 UQCC3Q6UW78 93 aa6.16□□□□□ -1.42
HLA-DOA-206ENST00000495532 TEX43Q6ZNM6 134 aa6.16□□□□□ -1.42
HLA-DOA-206ENST00000495532 CBLN2Q8IUK8 224 aa6.16□□□□□ -1.42
HLA-DOA-206ENST00000495532 EIF5A2Q9GZV4 153 aaKnown RBP6.16□□□□□ -1.42
HLA-DOA-206ENST00000495532 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
HLA-DOA-206ENST00000495532 M0R378 163 aa6.15□□□□□ -1.42
HLA-DOA-206ENST00000495532 SLC7A5P1Q8MH63 180 aa6.15□□□□□ -1.42
HLA-DOA-206ENST00000495532 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
HLA-DOA-206ENST00000495532 GNB1LQ9BYB4 327 aa6.15□□□□□ -1.42
HLA-DOA-206ENST00000495532 CKS2P33552 79 aa6.14□□□□□ -1.43
HLA-DOA-206ENST00000495532 TAGLN2P37802 199 aaKnown RBP6.14□□□□□ -1.43
HLA-DOA-206ENST00000495532 CXCL5P42830 114 aa6.14□□□□□ -1.43
HLA-DOA-206ENST00000495532 COMMD7Q86VX2 200 aa6.14□□□□□ -1.43
HLA-DOA-206ENST00000495532 HIGD2AQ9BW72 106 aa6.14□□□□□ -1.43
HLA-DOA-206ENST00000495532 NPYP01303 97 aa6.13□□□□□ -1.43
HLA-DOA-206ENST00000495532 RPS29P62273 56 aaKnown RBP6.13□□□□□ -1.43
HLA-DOA-206ENST00000495532 FAM19A3Q7Z5A8 133 aa6.13□□□□□ -1.43
HLA-DOA-206ENST00000495532 AMELXQ99217 191 aa6.13□□□□□ -1.43
HLA-DOA-206ENST00000495532 C2orf88Q9BSF0 95 aa6.13□□□□□ -1.43
HLA-DOA-206ENST00000495532 D6R8Y8 96 aa6.12□□□□□ -1.43
HLA-DOA-206ENST00000495532 C10orf91Q5T1B1 145 aa6.12□□□□□ -1.43
HLA-DOA-206ENST00000495532 OSTCQ9NRP0 149 aa6.12□□□□□ -1.43
HLA-DOA-206ENST00000495532 CDKN2A-AS1Q9UH64 79 aa6.12□□□□□ -1.43
HLA-DOA-206ENST00000495532 TMEM250H0YL14 139 aa6.11□□□□□ -1.43
HLA-DOA-206ENST00000495532 LINC01551Q86U37 167 aa6.11□□□□□ -1.43
HLA-DOA-206ENST00000495532 V9GYV3 84 aa6.11□□□□□ -1.43
HLA-DOA-206ENST00000495532 KRTAP4-16G5E9R7 235 aaPredicted RBP6.1□□□□□ -1.43
HLA-DOA-206ENST00000495532 SLC25A20O43772 301 aa6.1□□□□□ -1.43
HLA-DOA-206ENST00000495532 VPREB1P12018 145 aa6.1□□□□□ -1.43
HLA-DOA-206ENST00000495532 RAB5BP61020 215 aa6.1□□□□□ -1.43
HLA-DOA-206ENST00000495532 C2orf66Q6UXQ4 117 aa6.1□□□□□ -1.43
HLA-DOA-206ENST00000495532 SYNE2Q8WXH0 6885 aaKnown RBP6.1□□□□□ -1.43
HLA-DOA-206ENST00000495532 TMEM218A2RU14 115 aa6.09□□□□□ -1.43
HLA-DOA-206ENST00000495532 RAB5AP20339 215 aa6.09□□□□□ -1.43
HLA-DOA-206ENST00000495532 HERVK_113P63121 156 aa6.09□□□□□ -1.43
HLA-DOA-206ENST00000495532 SEC11CQ9BY50 192 aa6.09□□□□□ -1.43
HLA-DOA-206ENST00000495532 VCX2Q9H322 139 aa6.09□□□□□ -1.43
HLA-DOA-206ENST00000495532 NAT8BQ9UHF3 227 aa6.09□□□□□ -1.43
HLA-DOA-206ENST00000495532 ZNF706Q9Y5V0 76 aaPredicted RBP6.09□□□□□ -1.43
HLA-DOA-206ENST00000495532 SMIM1B2RUZ4 78 aa6.08□□□□□ -1.44
HLA-DOA-206ENST00000495532 PEA15Q15121 130 aa6.08□□□□□ -1.44
HLA-DOA-206ENST00000495532 COX6B2Q6YFQ2 88 aa6.08□□□□□ -1.44
HLA-DOA-206ENST00000495532 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
HLA-DOA-206ENST00000495532 CEBPGP53567 150 aa6.07□□□□□ -1.44
HLA-DOA-206ENST00000495532 FAM74A3Q4VXF1 159 aa6.07□□□□□ -1.44
HLA-DOA-206ENST00000495532 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
HLA-DOA-206ENST00000495532 SRP19P09132 144 aaKnown RBP6.06□□□□□ -1.44
HLA-DOA-206ENST00000495532 Q8NDZ9 215 aa6.06□□□□□ -1.44
HLA-DOA-206ENST00000495532 SMIM7Q9BQ49 75 aa6.06□□□□□ -1.44
HLA-DOA-206ENST00000495532 GEMIN7Q9H840 131 aaKnown RBP6.06□□□□□ -1.44
HLA-DOA-206ENST00000495532 CYSLTR1Q9Y271 337 aa6.06□□□□□ -1.44
HLA-DOA-206ENST00000495532 IGIPA6NJ69 53 aa6.05□□□□□ -1.44
HLA-DOA-206ENST00000495532 C9JQL5 133 aa6.05□□□□□ -1.44
HLA-DOA-206ENST00000495532 PPBPP02775 128 aa6.05□□□□□ -1.44
HLA-DOA-206ENST00000495532 NPSP0C0P6 89 aa6.05□□□□□ -1.44
HLA-DOA-206ENST00000495532 ADCYAP1P18509 176 aa6.05□□□□□ -1.44
HLA-DOA-206ENST00000495532 SEC11AP67812 179 aa6.05□□□□□ -1.44
HLA-DOA-206ENST00000495532 LINC00483Q53H64 154 aa6.05□□□□□ -1.44
HLA-DOA-206ENST00000495532 PDZD11Q5EBL8 140 aa6.05□□□□□ -1.44
HLA-DOA-206ENST00000495532 A0A1B0GW15 77 aa6.04□□□□□ -1.44
HLA-DOA-206ENST00000495532 MOBPQ13875 183 aa6.04□□□□□ -1.44
HLA-DOA-206ENST00000495532 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
HLA-DOA-206ENST00000495532 SMIM27A0A1W2PRY6 76 aa6.03□□□□□ -1.44
HLA-DOA-206ENST00000495532 ORMDL3Q8N138 153 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms