RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 PRSS47A8MTI9 375 aa6.98□□□□□ -1.29
RAPGEF3-213ENST00000494764 ZNF861PO60384 105 aa6.98□□□□□ -1.29
RAPGEF3-213ENST00000494764 ATP5L2Q7Z4Y8 100 aa6.98□□□□□ -1.29
RAPGEF3-213ENST00000494764 VCX2Q9H322 139 aa6.98□□□□□ -1.29
RAPGEF3-213ENST00000494764 LBHQ53QV2 105 aaPredicted RBP6.97□□□□□ -1.29
RAPGEF3-213ENST00000494764 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
RAPGEF3-213ENST00000494764 LINC00518Q8N0U6 118 aa6.97□□□□□ -1.29
RAPGEF3-213ENST00000494764 LINC00469Q8N7U9 141 aa6.97□□□□□ -1.29
RAPGEF3-213ENST00000494764 MAP1LC3AQ9H492 121 aa6.97□□□□□ -1.29
RAPGEF3-213ENST00000494764 CYSLTR1Q9Y271 337 aa6.97□□□□□ -1.29
RAPGEF3-213ENST00000494764 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
RAPGEF3-213ENST00000494764 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
RAPGEF3-213ENST00000494764 NUPR1O60356 82 aa6.96□□□□□ -1.3
RAPGEF3-213ENST00000494764 C2orf66Q6UXQ4 117 aa6.96□□□□□ -1.3
RAPGEF3-213ENST00000494764 ALKBH7Q9BT30 221 aaPredicted RBP6.96□□□□□ -1.3
RAPGEF3-213ENST00000494764 RPS10P5Q9NQ39 176 aa6.96□□□□□ -1.3
RAPGEF3-213ENST00000494764 ADCYAP1P18509 176 aa6.95□□□□□ -1.3
RAPGEF3-213ENST00000494764 AKR1D1P51857 326 aa6.95□□□□□ -1.3
RAPGEF3-213ENST00000494764 ORMDL2Q53FV1 153 aa6.95□□□□□ -1.3
RAPGEF3-213ENST00000494764 Q8N8P6 123 aa6.95□□□□□ -1.3
RAPGEF3-213ENST00000494764 AMELXQ99217 191 aa6.95□□□□□ -1.3
RAPGEF3-213ENST00000494764 TSPAN13O95857 204 aa6.94□□□□□ -1.3
RAPGEF3-213ENST00000494764 CBLN2Q8IUK8 224 aa6.94□□□□□ -1.3
RAPGEF3-213ENST00000494764 Q8IZM0 81 aa6.94□□□□□ -1.3
RAPGEF3-213ENST00000494764 CTDSP1Q9GZU7 261 aa6.94□□□□□ -1.3
RAPGEF3-213ENST00000494764 XAGE1AQ9HD64 81 aa6.94□□□□□ -1.3
RAPGEF3-213ENST00000494764 COLCA2A8K830 154 aa6.93□□□□□ -1.3
RAPGEF3-213ENST00000494764 NPSP0C0P6 89 aa6.93□□□□□ -1.3
RAPGEF3-213ENST00000494764 SMIM6P0DI80 62 aa6.93□□□□□ -1.3
RAPGEF3-213ENST00000494764 SEC11AP67812 179 aa6.93□□□□□ -1.3
RAPGEF3-213ENST00000494764 PNRC1Q12796 327 aaPredicted RBP6.93□□□□□ -1.3
RAPGEF3-213ENST00000494764 LINC00173Q6ZV60 143 aa6.93□□□□□ -1.3
RAPGEF3-213ENST00000494764 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
RAPGEF3-213ENST00000494764 IGIPA6NJ69 53 aa6.92□□□□□ -1.3
RAPGEF3-213ENST00000494764 K7EMI3 77 aa6.92□□□□□ -1.3
RAPGEF3-213ENST00000494764 G0S2P27469 103 aa6.92□□□□□ -1.3
RAPGEF3-213ENST00000494764 RPL28P46779 137 aaKnown RBP6.92□□□□□ -1.3
RAPGEF3-213ENST00000494764 HERVK_113P63121 156 aa6.92□□□□□ -1.3
RAPGEF3-213ENST00000494764 PAPPA-AS1Q5QFB9 102 aa6.92□□□□□ -1.3
RAPGEF3-213ENST00000494764 GEMIN7Q9H840 131 aaKnown RBP6.92□□□□□ -1.3
RAPGEF3-213ENST00000494764 A0A0U1RQV1 116 aa6.91□□□□□ -1.3
RAPGEF3-213ENST00000494764 F8VRH5 84 aa6.91□□□□□ -1.3
RAPGEF3-213ENST00000494764 MRPL55Q7Z7F7 128 aaKnown RBP6.91□□□□□ -1.3
RAPGEF3-213ENST00000494764 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
RAPGEF3-213ENST00000494764 C12orf57Q99622 126 aa6.91□□□□□ -1.3
RAPGEF3-213ENST00000494764 TP73-AS1Q9UF72 201 aa6.91□□□□□ -1.3
RAPGEF3-213ENST00000494764 CDKN2A-AS1Q9UH64 79 aa6.91□□□□□ -1.3
RAPGEF3-213ENST00000494764 CRYGAP11844 174 aa6.9□□□□□ -1.3
RAPGEF3-213ENST00000494764 TYMSOSQ8TAI1 123 aa6.9□□□□□ -1.3
RAPGEF3-213ENST00000494764 NXT2Q9NPJ8 142 aaKnown RBP6.9□□□□□ -1.3
RAPGEF3-213ENST00000494764 BCE1O60756 84 aa6.89□□□□□ -1.31
RAPGEF3-213ENST00000494764 CXCL5P42830 114 aa6.89□□□□□ -1.31
RAPGEF3-213ENST00000494764 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
RAPGEF3-213ENST00000494764 C5orf52A6NGY3 159 aa6.88□□□□□ -1.31
RAPGEF3-213ENST00000494764 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
RAPGEF3-213ENST00000494764 S100PP25815 95 aa6.88□□□□□ -1.31
RAPGEF3-213ENST00000494764 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
RAPGEF3-213ENST00000494764 A0A087X002 238 aa6.87□□□□□ -1.31
RAPGEF3-213ENST00000494764 S100A2P29034 98 aa6.87□□□□□ -1.31
RAPGEF3-213ENST00000494764 SNRPEP62304 92 aaKnown RBP6.87□□□□□ -1.31
RAPGEF3-213ENST00000494764 COX7B2Q8TF08 81 aa6.87□□□□□ -1.31
RAPGEF3-213ENST00000494764 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
RAPGEF3-213ENST00000494764 GAGE10A6NGK3 116 aa6.86□□□□□ -1.31
RAPGEF3-213ENST00000494764 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
RAPGEF3-213ENST00000494764 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
RAPGEF3-213ENST00000494764 ERASQ7Z444 233 aa6.86□□□□□ -1.31
RAPGEF3-213ENST00000494764 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
RAPGEF3-213ENST00000494764 UBE2AP49459 152 aa6.85□□□□□ -1.31
RAPGEF3-213ENST00000494764 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
RAPGEF3-213ENST00000494764 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
RAPGEF3-213ENST00000494764 TINCRA0A1B0GVN0 87 aa6.84□□□□□ -1.31
RAPGEF3-213ENST00000494764 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.31
RAPGEF3-213ENST00000494764 FABP9Q0Z7S8 132 aa6.84□□□□□ -1.31
RAPGEF3-213ENST00000494764 KIAA1644Q3SXP7 199 aa6.84□□□□□ -1.31
RAPGEF3-213ENST00000494764 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
RAPGEF3-213ENST00000494764 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
RAPGEF3-213ENST00000494764 CTAG1AP78358 180 aa6.83□□□□□ -1.32
RAPGEF3-213ENST00000494764 LINC01549A6NIU2 74 aa6.82□□□□□ -1.32
RAPGEF3-213ENST00000494764 IGLV5-37A0A075B6J1 123 aa6.81□□□□□ -1.32
RAPGEF3-213ENST00000494764 SPINK8P0C7L1 97 aa6.81□□□□□ -1.32
RAPGEF3-213ENST00000494764 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
RAPGEF3-213ENST00000494764 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
RAPGEF3-213ENST00000494764 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
RAPGEF3-213ENST00000494764 CST9LQ9H4G1 147 aa6.81□□□□□ -1.32
RAPGEF3-213ENST00000494764 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 IGLV5-45A0A087WSX0 123 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 IGKV2D-26A0A0A0MRZ7 120 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 ATP5LO75964 103 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 NDUFA6P56556 154 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 YPEL4Q96NS1 127 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 RETNLBQ9BQ08 111 aa6.8□□□□□ -1.32
RAPGEF3-213ENST00000494764 H3BRM9 83 aa6.79□□□□□ -1.32
RAPGEF3-213ENST00000494764 PFN2P35080 140 aa6.79□□□□□ -1.32
RAPGEF3-213ENST00000494764 PMVKQ15126 192 aa6.79□□□□□ -1.32
RAPGEF3-213ENST00000494764 KRTAP13-1Q8IUC0 172 aa6.79□□□□□ -1.32
RAPGEF3-213ENST00000494764 FAM19A1Q7Z5A9 133 aa6.78□□□□□ -1.32
RAPGEF3-213ENST00000494764 KRTAP9-2Q9BYQ4 174 aa6.78□□□□□ -1.32
RAPGEF3-213ENST00000494764 CDIP1Q9H305 208 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms