RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 KIR2DL5BQ8NHK3 375 aa10.69□□□□□ -0.7
SDF4-207ENST00000494748 PLA2G2AP14555 144 aa10.68□□□□□ -0.7
SDF4-207ENST00000494748 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
SDF4-207ENST00000494748 USP17L23D6RBM5 183 aa10.68□□□□□ -0.7
SDF4-207ENST00000494748 CCKP06307 115 aa10.67□□□□□ -0.7
SDF4-207ENST00000494748 TRBV6-8A0A0A6YYG3 113 aa10.67□□□□□ -0.7
SDF4-207ENST00000494748 RNASE1P07998 156 aaKnown RBP10.67□□□□□ -0.7
SDF4-207ENST00000494748 DPH3Q96FX2 82 aa10.66□□□□□ -0.7
SDF4-207ENST00000494748 NF1P21359 2839 aa10.66□□□□□ -0.7
SDF4-207ENST00000494748 PAX4O43316 350 aa10.66□□□□□ -0.7
SDF4-207ENST00000494748 C11orf44Q8N8P7 122 aa10.66□□□□□ -0.7
SDF4-207ENST00000494748 ORMDL1Q9P0S3 153 aa10.65□□□□□ -0.7
SDF4-207ENST00000494748 TMEM258P61165 79 aa10.65□□□□□ -0.7
SDF4-207ENST00000494748 FHL2Q14192 279 aa10.65□□□□□ -0.7
SDF4-207ENST00000494748 SMIM9A6NGZ8 99 aa10.64□□□□□ -0.71
SDF4-207ENST00000494748 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
SDF4-207ENST00000494748 HILS1P60008 231 aa10.64□□□□□ -0.71
SDF4-207ENST00000494748 CSNK1G2-AS1Q8NCQ2 148 aa10.64□□□□□ -0.71
SDF4-207ENST00000494748 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
SDF4-207ENST00000494748 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
SDF4-207ENST00000494748 WFDC10AQ9H1F0 79 aa10.63□□□□□ -0.71
SDF4-207ENST00000494748 IGSF10Q6WRI0 2623 aa10.63□□□□□ -0.71
SDF4-207ENST00000494748 OR13C6PQ8NH95 151 aa10.63□□□□□ -0.71
SDF4-207ENST00000494748 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
SDF4-207ENST00000494748 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
SDF4-207ENST00000494748 PRR3P79522 188 aaKnown RBP10.62□□□□□ -0.71
SDF4-207ENST00000494748 Q8N814 137 aa10.61□□□□□ -0.71
SDF4-207ENST00000494748 C19orf73Q9NVV2 129 aa10.61□□□□□ -0.71
SDF4-207ENST00000494748 C5orf47Q569G3 176 aa10.6□□□□□ -0.71
SDF4-207ENST00000494748 WFDC9Q8NEX5 89 aa10.6□□□□□ -0.71
SDF4-207ENST00000494748 TRGV4A0A0C4DH28 118 aa10.59□□□□□ -0.71
SDF4-207ENST00000494748 DSCR8Q96T75 97 aa10.59□□□□□ -0.71
SDF4-207ENST00000494748 Q8NDZ9 215 aa10.59□□□□□ -0.71
SDF4-207ENST00000494748 Q8IZM0 81 aa10.58□□□□□ -0.72
SDF4-207ENST00000494748 FAM19A1Q7Z5A9 133 aa10.58□□□□□ -0.72
SDF4-207ENST00000494748 A0A1W2PRX2 142 aa10.58□□□□□ -0.72
SDF4-207ENST00000494748 C6orf226Q5I0X4 101 aa10.58□□□□□ -0.72
SDF4-207ENST00000494748 CCL24O00175 119 aa10.57□□□□□ -0.72
SDF4-207ENST00000494748 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
SDF4-207ENST00000494748 XCL1P47992 114 aa10.56□□□□□ -0.72
SDF4-207ENST00000494748 KIAA0087Q14695 138 aa10.56□□□□□ -0.72
SDF4-207ENST00000494748 ATP5EP2Q5VTU8 51 aa10.56□□□□□ -0.72
SDF4-207ENST00000494748 RPL35AP18077 110 aaKnown RBP10.55□□□□□ -0.72
SDF4-207ENST00000494748 Q5XG85 94 aa10.55□□□□□ -0.72
SDF4-207ENST00000494748 NDUFC2O95298 119 aa10.54□□□□□ -0.72
SDF4-207ENST00000494748 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
SDF4-207ENST00000494748 GHRHP01286 108 aa10.54□□□□□ -0.72
SDF4-207ENST00000494748 ENHOQ6UWT2 76 aa10.54□□□□□ -0.72
SDF4-207ENST00000494748 TRAV23DV6A0A075B6W5 121 aa10.54□□□□□ -0.72
SDF4-207ENST00000494748 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
SDF4-207ENST00000494748 A0A1B0GUV1 79 aa10.53□□□□□ -0.72
SDF4-207ENST00000494748 KRTAP10-9P60411 292 aa10.53□□□□□ -0.72
SDF4-207ENST00000494748 S100A7L2Q5SY68 101 aa10.53□□□□□ -0.72
SDF4-207ENST00000494748 TMEM86BQ8N661 226 aa10.53□□□□□ -0.72
SDF4-207ENST00000494748 TRBV10-3A0A0K0K1G6 114 aa10.52□□□□□ -0.73
SDF4-207ENST00000494748 ANK3Q12955 4377 aaKnown RBP10.52□□□□□ -0.73
SDF4-207ENST00000494748 CLPSL2Q6UWE3 100 aa10.51□□□□□ -0.73
SDF4-207ENST00000494748 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
SDF4-207ENST00000494748 M0R2N4 97 aa10.51□□□□□ -0.73
SDF4-207ENST00000494748 Q6ZQT0 140 aa10.5□□□□□ -0.73
SDF4-207ENST00000494748 DNAJC9-AS1A6NH13 148 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 IGLV1-51P01701 117 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 C9orf116Q5BN46 136 aaPredicted RBP10.49□□□□□ -0.73
SDF4-207ENST00000494748 ESM1Q9NQ30 184 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 IGHV4-28A0A0C4DH34 117 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 C4orf26Q17RF5 130 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 KRTAP1-3Q8IUG1 177 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 SPATA3Q8NHX4 192 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 APCP25054 2843 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 COX17Q14061 63 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 LINC00575Q6W349 94 aa10.49□□□□□ -0.73
SDF4-207ENST00000494748 GYPEP15421 78 aa10.48□□□□□ -0.73
SDF4-207ENST00000494748 WIPF1O43516 503 aa10.47□□□□□ -0.73
SDF4-207ENST00000494748 CMC4P56277 68 aaPredicted RBP10.47□□□□□ -0.73
SDF4-207ENST00000494748 UBR5O95071 2799 aaPredicted RBP10.47□□□□□ -0.73
SDF4-207ENST00000494748 LOC110117498A0A087WWA1 95 aa10.47□□□□□ -0.73
SDF4-207ENST00000494748 EPM2AB3EWF7 344 aa10.47□□□□□ -0.73
SDF4-207ENST00000494748 Q8N3U1 123 aa10.46□□□□□ -0.73
SDF4-207ENST00000494748 ITPR3Q14573 2671 aa10.46□□□□□ -0.73
SDF4-207ENST00000494748 ZNF462Q96JM2 2506 aa10.46□□□□□ -0.73
SDF4-207ENST00000494748 DEFB130BP0DP73 79 aa10.46□□□□□ -0.74
SDF4-207ENST00000494748 DEFB130AP0DP74 79 aa10.46□□□□□ -0.74
SDF4-207ENST00000494748 C6orf223Q8N319 242 aa10.45□□□□□ -0.74
SDF4-207ENST00000494748 UBL5Q9BZL1 73 aa10.45□□□□□ -0.74
SDF4-207ENST00000494748 F8P00451 2351 aa10.45□□□□□ -0.74
SDF4-207ENST00000494748 CD164L2Q6UWJ8 174 aa10.44□□□□□ -0.74
SDF4-207ENST00000494748 C20orf197Q8N268 126 aa10.44□□□□□ -0.74
SDF4-207ENST00000494748 LINC00269Q8N2A0 174 aa10.44□□□□□ -0.74
SDF4-207ENST00000494748 H7BZZ5 65 aa10.43□□□□□ -0.74
SDF4-207ENST00000494748 DEFB113Q30KQ7 82 aa10.43□□□□□ -0.74
SDF4-207ENST00000494748 LINC00482Q8N8I6 264 aa10.43□□□□□ -0.74
SDF4-207ENST00000494748 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
SDF4-207ENST00000494748 GCN1Q92616 2671 aaKnown RBP10.43□□□□□ -0.74
SDF4-207ENST00000494748 A0A096LPF7 62 aa10.42□□□□□ -0.74
SDF4-207ENST00000494748 LINC01547P58512 204 aaPredicted RBP10.42□□□□□ -0.74
SDF4-207ENST00000494748 BBC3Q96PG8 261 aaPredicted RBP10.42□□□□□ -0.74
SDF4-207ENST00000494748 PRB1P04280 392 aa10.42□□□□□ -0.74
SDF4-207ENST00000494748 CHCHD10Q8WYQ3 142 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms