RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
CHMP3-209ENST00000494623 APOC4P55056 127 aa7.76□□□□□ -1.17
CHMP3-209ENST00000494623 NSD1Q96L73 2696 aaPredicted RBP7.75□□□□□ -1.17
CHMP3-209ENST00000494623 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 CRPP02741 224 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 CCL18P55774 89 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 DAD1P61803 113 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 LINC00337Q8N6G1 96 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 IBA57-AS1B1ANH7 110 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 LINC00269Q8N2A0 174 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 ATRQ13535 2644 aa7.75□□□□□ -1.17
CHMP3-209ENST00000494623 Q8N3U1 123 aa7.74□□□□□ -1.17
CHMP3-209ENST00000494623 HTN3P15516 51 aa7.74□□□□□ -1.17
CHMP3-209ENST00000494623 FAM218AQ96MZ4 157 aa7.74□□□□□ -1.17
CHMP3-209ENST00000494623 PPDPFQ9H3Y8 114 aa7.74□□□□□ -1.17
CHMP3-209ENST00000494623 CELA1Q9UNI1 258 aa7.74□□□□□ -1.17
CHMP3-209ENST00000494623 IGLV10-54A0A075B6I4 117 aa7.73□□□□□ -1.17
CHMP3-209ENST00000494623 HIVEP1P15822 2718 aa7.73□□□□□ -1.17
CHMP3-209ENST00000494623 TRRAPQ9Y4A5 3859 aa7.73□□□□□ -1.17
CHMP3-209ENST00000494623 ANGP03950 147 aaKnown RBP7.72□□□□□ -1.17
CHMP3-209ENST00000494623 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
CHMP3-209ENST00000494623 BAALC-AS2P0C853 105 aa7.72□□□□□ -1.17
CHMP3-209ENST00000494623 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
CHMP3-209ENST00000494623 SMIM11BQ8TCY0 68 aa7.72□□□□□ -1.17
CHMP3-209ENST00000494623 Q9HAA7 133 aa7.72□□□□□ -1.17
CHMP3-209ENST00000494623 TEP1Q99973 2627 aaKnown RBP7.71□□□□□ -1.18
CHMP3-209ENST00000494623 SNCGO76070 127 aa7.71□□□□□ -1.18
CHMP3-209ENST00000494623 TRACP01848 142 aa7.71□□□□□ -1.18
CHMP3-209ENST00000494623 ATP5G1P05496 136 aa7.71□□□□□ -1.18
CHMP3-209ENST00000494623 Q8NAQ8 132 aa7.71□□□□□ -1.18
CHMP3-209ENST00000494623 Q8IZM0 81 aa7.7□□□□□ -1.18
CHMP3-209ENST00000494623 C15orf53Q8NAA6 179 aa7.7□□□□□ -1.18
CHMP3-209ENST00000494623 CHCHD10Q8WYQ3 142 aaPredicted RBP7.7□□□□□ -1.18
CHMP3-209ENST00000494623 SPART-AS1P0CW21 52 aa7.7□□□□□ -1.18
CHMP3-209ENST00000494623 IGHV4-30-4P0DP06 118 aa7.7□□□□□ -1.18
CHMP3-209ENST00000494623 MIFP14174 115 aa7.7□□□□□ -1.18
CHMP3-209ENST00000494623 REG3AQ06141 175 aa7.7□□□□□ -1.18
CHMP3-209ENST00000494623 DEFB121Q5J5C9 76 aa7.7□□□□□ -1.18
CHMP3-209ENST00000494623 MALP21145 153 aa7.69□□□□□ -1.18
CHMP3-209ENST00000494623 CD164L2Q6UWJ8 174 aa7.69□□□□□ -1.18
CHMP3-209ENST00000494623 ANAPC13Q9BS18 74 aa7.69□□□□□ -1.18
CHMP3-209ENST00000494623 GAGE2BQ13066 116 aa7.68□□□□□ -1.18
CHMP3-209ENST00000494623 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
CHMP3-209ENST00000494623 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
CHMP3-209ENST00000494623 A0A087WYN8 130 aa7.68□□□□□ -1.18
CHMP3-209ENST00000494623 TTC32Q5I0X7 151 aa7.68□□□□□ -1.18
CHMP3-209ENST00000494623 WFDC9Q8NEX5 89 aa7.68□□□□□ -1.18
CHMP3-209ENST00000494623 PRR3P79522 188 aaKnown RBP7.67□□□□□ -1.18
CHMP3-209ENST00000494623 MRPL23Q16540 153 aaKnown RBP7.67□□□□□ -1.18
CHMP3-209ENST00000494623 KIAA0087Q14695 138 aa7.67□□□□□ -1.18
CHMP3-209ENST00000494623 LINC01561Q8N1V8 128 aa7.67□□□□□ -1.18
CHMP3-209ENST00000494623 C9orf116Q5BN46 136 aaPredicted RBP7.66□□□□□ -1.18
CHMP3-209ENST00000494623 C22orf24Q9Y442 160 aa7.66□□□□□ -1.18
CHMP3-209ENST00000494623 DNAL4O96015 105 aa7.66□□□□□ -1.18
CHMP3-209ENST00000494623 C5orf47Q569G3 176 aa7.66□□□□□ -1.18
CHMP3-209ENST00000494623 H0YGX0 51 aa7.65□□□□□ -1.18
CHMP3-209ENST00000494623 FAM240AA0A1B0GVK7 77 aa7.65□□□□□ -1.19
CHMP3-209ENST00000494623 LELP1Q5T871 98 aa7.65□□□□□ -1.19
CHMP3-209ENST00000494623 OXLD1Q5BKU9 147 aa7.64□□□□□ -1.19
CHMP3-209ENST00000494623 KLK12Q9UKR0 248 aa7.64□□□□□ -1.19
CHMP3-209ENST00000494623 LECT2O14960 151 aa7.64□□□□□ -1.19
CHMP3-209ENST00000494623 LINC00526Q96FQ7 95 aa7.64□□□□□ -1.19
CHMP3-209ENST00000494623 C6orf223Q8N319 242 aa7.63□□□□□ -1.19
CHMP3-209ENST00000494623 SLPIP03973 132 aa7.63□□□□□ -1.19
CHMP3-209ENST00000494623 CXCL5P42830 114 aa7.62□□□□□ -1.19
CHMP3-209ENST00000494623 RETNQ9HD89 108 aa7.62□□□□□ -1.19
CHMP3-209ENST00000494623 COX17Q14061 63 aa7.62□□□□□ -1.19
CHMP3-209ENST00000494623 ACYP1P07311 99 aa7.61□□□□□ -1.19
CHMP3-209ENST00000494623 C10orf25Q5T742 122 aa7.61□□□□□ -1.19
CHMP3-209ENST00000494623 LYPD5Q6UWN5 251 aa7.61□□□□□ -1.19
CHMP3-209ENST00000494623 UNQ6190/PRO20217Q6UXQ8 127 aa7.61□□□□□ -1.19
CHMP3-209ENST00000494623 WIPF1O43516 503 aa7.61□□□□□ -1.19
CHMP3-209ENST00000494623 NHLRC4P0CG21 123 aaPredicted RBP7.61□□□□□ -1.19
CHMP3-209ENST00000494623 SPAG11BQ08648 103 aa7.61□□□□□ -1.19
CHMP3-209ENST00000494623 C9orf129Q5T035 196 aaKnown RBP7.61□□□□□ -1.19
CHMP3-209ENST00000494623 GAGE2AQ6NT46 116 aa7.6□□□□□ -1.19
CHMP3-209ENST00000494623 CCDC179H3BU77 68 aa7.6□□□□□ -1.19
CHMP3-209ENST00000494623 NDUFV3P56181 108 aaKnown RBP7.6□□□□□ -1.19
CHMP3-209ENST00000494623 NANOS2P60321 138 aaKnown RBP7.6□□□□□ -1.19
CHMP3-209ENST00000494623 KRTAP10-11P60412 298 aa7.6□□□□□ -1.19
CHMP3-209ENST00000494623 ENHOQ6UWT2 76 aa7.6□□□□□ -1.19
CHMP3-209ENST00000494623 KLK5Q9Y337 293 aaPredicted RBP7.6□□□□□ -1.19
CHMP3-209ENST00000494623 NCR3O14931 201 aa7.59□□□□□ -1.19
CHMP3-209ENST00000494623 INAFM2P0DMQ5 153 aa7.59□□□□□ -1.19
CHMP3-209ENST00000494623 Q6Q795 121 aa7.59□□□□□ -1.19
CHMP3-209ENST00000494623 CYSRT1A8MQ03 144 aa7.59□□□□□ -1.19
CHMP3-209ENST00000494623 SMCR5Q8TEV8 140 aa7.59□□□□□ -1.19
CHMP3-209ENST00000494623 NDUFC2O95298 119 aa7.58□□□□□ -1.2
CHMP3-209ENST00000494623 Q8NDZ9 215 aa7.58□□□□□ -1.2
CHMP3-209ENST00000494623 PRR34Q9NV39 138 aa7.58□□□□□ -1.2
CHMP3-209ENST00000494623 TMEM126AQ9H061 195 aa7.58□□□□□ -1.2
CHMP3-209ENST00000494623 C14orf132Q9NPU4 83 aa7.58□□□□□ -1.2
CHMP3-209ENST00000494623 S100A7L2Q5SY68 101 aa7.57□□□□□ -1.2
CHMP3-209ENST00000494623 KPRPQ5T749 579 aaPredicted RBP7.57□□□□□ -1.2
CHMP3-209ENST00000494623 ORMDL1Q9P0S3 153 aa7.57□□□□□ -1.2
CHMP3-209ENST00000494623 Q6ZTC4 211 aa7.56□□□□□ -1.2
CHMP3-209ENST00000494623 WFDC10BQ8IUB3 73 aa7.56□□□□□ -1.2
CHMP3-209ENST00000494623 F8P00451 2351 aa7.56□□□□□ -1.2
CHMP3-209ENST00000494623 LINC00643Q86TS7 51 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms