RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 IGLC7A0M8Q6 106 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 GABARAPH6UMI1 98 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 H7BYZ3 331 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 HIST1H2BKO60814 126 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 HIST1H2BJP06899 126 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 TRAPPC2P0DI81 140 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 TRAPPC2BP0DI82 140 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 DEFB130BP0DP73 79 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 DEFB130AP0DP74 79 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
SMC4-224ENST00000494612 KLK9Q2XQG4 91 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 XAF1Q6GPH4 301 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 MAFIPQ8WZ33 124 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 CHCHD1Q96BP2 118 aaKnown RBP1.52□□□□□ -2.17
SMC4-224ENST00000494612 ARHGAP5-AS1Q96IT6 56 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 BET1LQ9NYM9 111 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 TAS2R8Q9NYW2 309 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 KLK9Q9UKQ9 250 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 PKHD1L1Q86WI1 4243 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 A0A087WTM6 91 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 K7EIM0 57 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 SNAPC5O75971 98 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 MT-ND6P03923 174 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 OR10J4P0C629 311 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 SCGB1A1P11684 91 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 SDC2P34741 201 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 ASIPP42127 132 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 RPL35P42766 123 aaKnown RBP1.51□□□□□ -2.17
SMC4-224ENST00000494612 ARPC4P59998 168 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 RAB4BP61018 213 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 WT1-ASQ06250 92 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 FP248Q71RG6 208 aaPredicted RBP1.51□□□□□ -2.17
SMC4-224ENST00000494612 PRR15Q8IV56 129 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 OR4B1Q8NGF8 309 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 LSM10Q969L4 123 aaKnown RBP1.51□□□□□ -2.17
SMC4-224ENST00000494612 LINC00052Q96N35 136 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 LINC00467Q9BRT7 94 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 LPAR5Q9H1C0 372 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 C14orf132Q9NPU4 83 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 OR5AC2Q9NZP5 309 aa1.51□□□□□ -2.17
SMC4-224ENST00000494612 FLG2Q5D862 2391 aaPredicted RBP1.51□□□□□ -2.17
SMC4-224ENST00000494612 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 TRAV5A0A0B4J249 113 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 A0A0J9YY99 117 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 TCRBV3S1A0A5B6 114 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 IGKV2-29A2NJV5 120 aaPredicted RBP1.5□□□□□ -2.17
SMC4-224ENST00000494612 TMEM14DPA8MWL7 114 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 I3L2K1 104 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 HLA-DRB4P13762 266 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 HTN1P15515 57 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 CATR1Q13166 79 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 HSD17B12Q53GQ0 312 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 FOXI2Q6ZQN5 318 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 PHF5AQ7RTV0 110 aaKnown RBP1.5□□□□□ -2.17
SMC4-224ENST00000494612 LINC00305Q7Z4B0 112 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 TMEM229BQ8NBD8 167 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 SFT2D1Q8WV19 159 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 RETNLBQ9BQ08 111 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 SLC35B3Q9H1N7 401 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 NDUFA4L2Q9NRX3 87 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 FKBP11Q9NYL4 201 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 HLA-DRB4X5D2U9 266 aa1.5□□□□□ -2.17
SMC4-224ENST00000494612 LRP1Q07954 4544 aaKnown RBP1.5□□□□□ -2.17
SMC4-224ENST00000494612 DNAH8Q96JB1 4490 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 LRP2P98164 4655 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 J3KT08 172 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 CORTO00230 105 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 ARPC5O15511 151 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 HIST1H1DP16402 221 aaKnown RBP1.49□□□□□ -2.17
SMC4-224ENST00000494612 SNCAP37840 140 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 FXYD4P59646 89 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 DEFB1P60022 68 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 RPS28P62857 69 aaKnown RBP1.49□□□□□ -2.17
SMC4-224ENST00000494612 QRFPP83859 136 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 PSG9Q00887 426 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 INSL4Q14641 139 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 GDF5OSQ5U4N7 250 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 PATE2Q6UY27 113 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 Q6ZSA8 131 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 TMEM254Q8TBM7 123 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 TMEM203Q969S6 136 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 TSC22D3Q99576 134 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 NOP10Q9NPE3 64 aaKnown RBP1.49□□□□□ -2.17
SMC4-224ENST00000494612 AP4S1Q9Y587 144 aa1.49□□□□□ -2.17
SMC4-224ENST00000494612 TIMM8BQ9Y5J9 83 aaPredicted RBP1.49□□□□□ -2.17
SMC4-224ENST00000494612 TNXBP22105 4242 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 TRAV12-2A0A075B6T6 113 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 TRAV30A0A087WSZ9 112 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 IGHV1-58A0A0C4DH39 117 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 TRBV6-5A0A0K0K1A5 114 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 LOC100130705A0A1B0GUX0 176 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 EFCAB10A6NFE3 127 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 C17orf112F2Z3M2 114 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 F8W036 122 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 H3BMG7 143 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 H3BNG1 76 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 M0R2Z0 102 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 PPYP01298 95 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 EVI2AP22794 236 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 RAB5CP51148 216 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 217.9 ms