RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 UBE2E2Q96LR5 201 aa7.01□□□□□ -1.29
LINC00488-201ENST00000494582 IL17DQ8TAD2 202 aa7.01□□□□□ -1.29
LINC00488-201ENST00000494582 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
LINC00488-201ENST00000494582 MAP6D1Q9H9H5 199 aa7.01□□□□□ -1.29
LINC00488-201ENST00000494582 A0A087WZ39 114 aa7□□□□□ -1.29
LINC00488-201ENST00000494582 C1orf158Q8N1D5 194 aa7□□□□□ -1.29
LINC00488-201ENST00000494582 Q8N3U1 123 aa7□□□□□ -1.29
LINC00488-201ENST00000494582 TRBV10-1A0A0K0K1A3 114 aa7□□□□□ -1.29
LINC00488-201ENST00000494582 INSP01308 110 aa7□□□□□ -1.29
LINC00488-201ENST00000494582 IGHV4-59P01825 116 aa7□□□□□ -1.29
LINC00488-201ENST00000494582 C6orf99Q4VX62 202 aa6.99□□□□□ -1.29
LINC00488-201ENST00000494582 V9GYY9 64 aa6.99□□□□□ -1.29
LINC00488-201ENST00000494582 ZANQ9Y493 2812 aa6.99□□□□□ -1.29
LINC00488-201ENST00000494582 MIFP14174 115 aa6.98□□□□□ -1.29
LINC00488-201ENST00000494582 DEFB123Q8N688 67 aa6.98□□□□□ -1.29
LINC00488-201ENST00000494582 HIVEP3Q5T1R4 2406 aa6.98□□□□□ -1.29
LINC00488-201ENST00000494582 LOC110117498A0A087WWA1 95 aa6.98□□□□□ -1.29
LINC00488-201ENST00000494582 PRB1P04280 392 aa6.98□□□□□ -1.29
LINC00488-201ENST00000494582 C6orf226Q5I0X4 101 aa6.98□□□□□ -1.29
LINC00488-201ENST00000494582 NIPBLQ6KC79 2804 aaeCLIP6.98□□□□□ -1.29
LINC00488-201ENST00000494582 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
LINC00488-201ENST00000494582 SPG11Q96JI7 2443 aa6.97□□□□□ -1.29
LINC00488-201ENST00000494582 LINC00575Q6W349 94 aa6.96□□□□□ -1.29
LINC00488-201ENST00000494582 C6orf223Q8N319 242 aa6.96□□□□□ -1.29
LINC00488-201ENST00000494582 PLA2G2AP14555 144 aa6.96□□□□□ -1.3
LINC00488-201ENST00000494582 NOP10Q9NPE3 64 aaKnown RBP6.96□□□□□ -1.3
LINC00488-201ENST00000494582 LAMTOR3Q9UHA4 124 aa6.96□□□□□ -1.3
LINC00488-201ENST00000494582 NREPQ16612 68 aa6.95□□□□□ -1.3
LINC00488-201ENST00000494582 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
LINC00488-201ENST00000494582 LINC00959A0A1B0GUT2 108 aa6.95□□□□□ -1.3
LINC00488-201ENST00000494582 ZNF561-AS1K7EIQ3 104 aa6.95□□□□□ -1.3
LINC00488-201ENST00000494582 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
LINC00488-201ENST00000494582 ITPR1Q14643 2758 aa6.94□□□□□ -1.3
LINC00488-201ENST00000494582 CXCL6P80162 114 aa6.94□□□□□ -1.3
LINC00488-201ENST00000494582 DEFB112Q30KQ8 113 aa6.94□□□□□ -1.3
LINC00488-201ENST00000494582 CHD6Q8TD26 2715 aa6.94□□□□□ -1.3
LINC00488-201ENST00000494582 NDUFC1O43677 76 aa6.94□□□□□ -1.3
LINC00488-201ENST00000494582 Q8N9L7 120 aa6.94□□□□□ -1.3
LINC00488-201ENST00000494582 JMJD1CQ15652 2540 aa6.94□□□□□ -1.3
LINC00488-201ENST00000494582 ODF3L2Q3SX64 289 aa6.93□□□□□ -1.3
LINC00488-201ENST00000494582 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
LINC00488-201ENST00000494582 KHDC1LQ5JSQ8 128 aa6.93□□□□□ -1.3
LINC00488-201ENST00000494582 BBC3Q96PG8 261 aaPredicted RBP6.93□□□□□ -1.3
LINC00488-201ENST00000494582 TRBV6-8A0A0A6YYG3 113 aa6.92□□□□□ -1.3
LINC00488-201ENST00000494582 FBN2P35556 2912 aa6.92□□□□□ -1.3
LINC00488-201ENST00000494582 WNK1Q9H4A3 2382 aa6.92□□□□□ -1.3
LINC00488-201ENST00000494582 PLAC8L1A1L4L8 177 aa6.92□□□□□ -1.3
LINC00488-201ENST00000494582 ATP5EP56381 51 aaPredicted RBP6.92□□□□□ -1.3
LINC00488-201ENST00000494582 SETXQ7Z333 2677 aaKnown RBP6.92□□□□□ -1.3
LINC00488-201ENST00000494582 IGF2RP11717 2491 aa6.92□□□□□ -1.3
LINC00488-201ENST00000494582 IGHV4-30-2A0A087WSY4 118 aa6.91□□□□□ -1.3
LINC00488-201ENST00000494582 BPY2O14599 106 aa6.91□□□□□ -1.3
LINC00488-201ENST00000494582 Q6ZQY7 126 aa6.91□□□□□ -1.3
LINC00488-201ENST00000494582 Q6ZTC4 211 aa6.91□□□□□ -1.3
LINC00488-201ENST00000494582 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
LINC00488-201ENST00000494582 C9orf66Q5T8R8 295 aa6.91□□□□□ -1.3
LINC00488-201ENST00000494582 Q8IZM0 81 aa6.91□□□□□ -1.3
LINC00488-201ENST00000494582 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
LINC00488-201ENST00000494582 DEFB114Q30KQ6 69 aa6.9□□□□□ -1.3
LINC00488-201ENST00000494582 MSMBP08118 114 aa6.9□□□□□ -1.31
LINC00488-201ENST00000494582 C11orf44Q8N8P7 122 aa6.9□□□□□ -1.31
LINC00488-201ENST00000494582 ZNF702PQ9H963 129 aa6.9□□□□□ -1.31
LINC00488-201ENST00000494582 CR1P17927 2039 aa6.9□□□□□ -1.31
LINC00488-201ENST00000494582 TRGV2A0A075B6R0 118 aa6.89□□□□□ -1.31
LINC00488-201ENST00000494582 ESRGQ1W209 222 aa6.89□□□□□ -1.31
LINC00488-201ENST00000494582 GNLYP22749 145 aa6.89□□□□□ -1.31
LINC00488-201ENST00000494582 TLN2Q9Y4G6 2542 aa6.89□□□□□ -1.31
LINC00488-201ENST00000494582 PRYO14603 147 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 GIG44P09565 113 aaPredicted RBP6.88□□□□□ -1.31
LINC00488-201ENST00000494582 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 DYNLRB2Q8TF09 96 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 MYO9AB2RTY4 2548 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 A0A1W2PRX2 142 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 LRCOL1A6NCL2 159 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
LINC00488-201ENST00000494582 STHQ8IWL8 128 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 LINC00269Q8N2A0 174 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 LINC01006Q8NI28 216 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 HIGD2AQ9BW72 106 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
LINC00488-201ENST00000494582 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
LINC00488-201ENST00000494582 TRGV4A0A0C4DH28 118 aa6.87□□□□□ -1.31
LINC00488-201ENST00000494582 APCP25054 2843 aa6.87□□□□□ -1.31
LINC00488-201ENST00000494582 IGKV4-1P06312 121 aa6.86□□□□□ -1.31
LINC00488-201ENST00000494582 DAD1P61803 113 aa6.86□□□□□ -1.31
LINC00488-201ENST00000494582 ERC2-IT1O76042 136 aa6.86□□□□□ -1.31
LINC00488-201ENST00000494582 C10orf25Q5T742 122 aa6.86□□□□□ -1.31
LINC00488-201ENST00000494582 USP9YO00507 2555 aaPredicted RBP6.85□□□□□ -1.31
LINC00488-201ENST00000494582 B4DSR2 109 aa6.85□□□□□ -1.31
LINC00488-201ENST00000494582 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
LINC00488-201ENST00000494582 WFDC10AQ9H1F0 79 aa6.85□□□□□ -1.31
LINC00488-201ENST00000494582 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
LINC00488-201ENST00000494582 IGHV4-31P0DP07 118 aa6.84□□□□□ -1.31
LINC00488-201ENST00000494582 UTP20O75691 2785 aaKnown RBP6.84□□□□□ -1.31
LINC00488-201ENST00000494582 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
LINC00488-201ENST00000494582 IGLV6-57P01721 117 aa6.84□□□□□ -1.31
LINC00488-201ENST00000494582 Q6ZRP5 223 aa6.84□□□□□ -1.31
LINC00488-201ENST00000494582 PDE6GP18545 87 aa6.83□□□□□ -1.32
LINC00488-201ENST00000494582 COX17Q14061 63 aa6.83□□□□□ -1.32
LINC00488-201ENST00000494582 PRR15Q8IV56 129 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms