RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.61
ATG4B-225ENST00000494465 IGHV3-33P01772 117 aa11.21□□□□□ -0.62
ATG4B-225ENST00000494465 FOXI1Q12951 378 aa11.21□□□□□ -0.62
ATG4B-225ENST00000494465 DNAH9Q9NYC9 4486 aa11.21□□□□□ -0.62
ATG4B-225ENST00000494465 COX7A2LO14548 114 aa11.2□□□□□ -0.62
ATG4B-225ENST00000494465 Q8IZM0 81 aa11.2□□□□□ -0.62
ATG4B-225ENST00000494465 TRAV10A0A0B4J240 114 aa11.19□□□□□ -0.62
ATG4B-225ENST00000494465 COL7A1Q02388 2944 aa11.19□□□□□ -0.62
ATG4B-225ENST00000494465 KIAA0087Q14695 138 aa11.18□□□□□ -0.62
ATG4B-225ENST00000494465 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
ATG4B-225ENST00000494465 C6orf226Q5I0X4 101 aa11.18□□□□□ -0.62
ATG4B-225ENST00000494465 GAGE12HA6NDE8 117 aa11.16□□□□□ -0.62
ATG4B-225ENST00000494465 PPDPFQ9H3Y8 114 aa11.16□□□□□ -0.62
ATG4B-225ENST00000494465 IBA57-AS1B1ANH7 110 aa11.16□□□□□ -0.62
ATG4B-225ENST00000494465 C2orf82Q6UX34 121 aa11.16□□□□□ -0.62
ATG4B-225ENST00000494465 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
ATG4B-225ENST00000494465 MIR7-3HGQ8N6C7 128 aa11.15□□□□□ -0.62
ATG4B-225ENST00000494465 UBE2WQ96B02 151 aa11.15□□□□□ -0.62
ATG4B-225ENST00000494465 LOC107984156A0A0G2JMH3 177 aa11.14□□□□□ -0.63
ATG4B-225ENST00000494465 ARL17AQ8IVW1 177 aa11.14□□□□□ -0.63
ATG4B-225ENST00000494465 H3BMG7 143 aa11.14□□□□□ -0.63
ATG4B-225ENST00000494465 MALP21145 153 aa11.14□□□□□ -0.63
ATG4B-225ENST00000494465 H7C2G1 150 aa11.13□□□□□ -0.63
ATG4B-225ENST00000494465 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
ATG4B-225ENST00000494465 TRAV8-4A0A0B4J246 113 aa11.13□□□□□ -0.63
ATG4B-225ENST00000494465 C15orf53Q8NAA6 179 aa11.13□□□□□ -0.63
ATG4B-225ENST00000494465 CRPP02741 224 aa11.12□□□□□ -0.63
ATG4B-225ENST00000494465 LINC00158P58513 81 aa11.12□□□□□ -0.63
ATG4B-225ENST00000494465 LINC01556Q5JQF7 62 aa11.12□□□□□ -0.63
ATG4B-225ENST00000494465 KRTAP26-1Q6PEX3 210 aa11.12□□□□□ -0.63
ATG4B-225ENST00000494465 KLK5Q9Y337 293 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-225ENST00000494465 PFN2P35080 140 aa11.11□□□□□ -0.63
ATG4B-225ENST00000494465 STAB2Q8WWQ8 2551 aa11.11□□□□□ -0.63
ATG4B-225ENST00000494465 CXCL5P42830 114 aa11.1□□□□□ -0.63
ATG4B-225ENST00000494465 CKS1BP61024 79 aa11.1□□□□□ -0.63
ATG4B-225ENST00000494465 TCL1BO95988 128 aa11.1□□□□□ -0.63
ATG4B-225ENST00000494465 RPL13AP40429 203 aaKnown RBP11.09□□□□□ -0.63
ATG4B-225ENST00000494465 Q1RN00 199 aa11.09□□□□□ -0.63
ATG4B-225ENST00000494465 LYRM7Q5U5X0 104 aa11.09□□□□□ -0.63
ATG4B-225ENST00000494465 B9D2Q9BPU9 175 aa11.09□□□□□ -0.63
ATG4B-225ENST00000494465 TRBV30A0A0K0K1B3 111 aa11.09□□□□□ -0.63
ATG4B-225ENST00000494465 PSMB2P49721 201 aa11.09□□□□□ -0.63
ATG4B-225ENST00000494465 CCL18P55774 89 aa11.09□□□□□ -0.63
ATG4B-225ENST00000494465 PRO0461Q9UI25 63 aa11.09□□□□□ -0.63
ATG4B-225ENST00000494465 LINC00588Q9Y4M8 146 aa11.09□□□□□ -0.63
ATG4B-225ENST00000494465 TRIAP1O43715 76 aa11.08□□□□□ -0.64
ATG4B-225ENST00000494465 DNAH10OSP0CZ25 163 aa11.08□□□□□ -0.64
ATG4B-225ENST00000494465 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
ATG4B-225ENST00000494465 C6orf223Q8N319 242 aa11.08□□□□□ -0.64
ATG4B-225ENST00000494465 TRBV20-1A0A075B6N2 111 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 SCGB1C2P0DMR2 95 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 SND1-IT1Q9HBX3 110 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 DNHD1Q96M86 4753 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 C10orf25Q5T742 122 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 MTURNQ8N3F0 131 aa11.06□□□□□ -0.64
ATG4B-225ENST00000494465 F8W1H4 67 aa11.05□□□□□ -0.64
ATG4B-225ENST00000494465 WFDC2Q14508 124 aa11.05□□□□□ -0.64
ATG4B-225ENST00000494465 C9orf116Q5BN46 136 aaPredicted RBP11.05□□□□□ -0.64
ATG4B-225ENST00000494465 DNAH1Q9P2D7 4330 aa11.05□□□□□ -0.64
ATG4B-225ENST00000494465 COX17Q14061 63 aa11.04□□□□□ -0.64
ATG4B-225ENST00000494465 UNQ6190/PRO20217Q6UXQ8 127 aa11.04□□□□□ -0.64
ATG4B-225ENST00000494465 LINC00337Q8N6G1 96 aa11.03□□□□□ -0.64
ATG4B-225ENST00000494465 DYNC2H1Q8NCM8 4307 aaKnown RBP11.02□□□□□ -0.64
ATG4B-225ENST00000494465 NTN5Q8WTR8 489 aaPredicted RBP11.02□□□□□ -0.65
ATG4B-225ENST00000494465 SMCPP49901 116 aaPredicted RBP11.02□□□□□ -0.65
ATG4B-225ENST00000494465 C1orf43Q9BWL3 253 aa11.01□□□□□ -0.65
ATG4B-225ENST00000494465 PRKDCP78527 4128 aaKnown RBP11.01□□□□□ -0.65
ATG4B-225ENST00000494465 OCIAD2Q56VL3 154 aa11.01□□□□□ -0.65
ATG4B-225ENST00000494465 C15orf56Q8N910 161 aa11.01□□□□□ -0.65
ATG4B-225ENST00000494465 UPK3BQ9BT76 320 aa11□□□□□ -0.65
ATG4B-225ENST00000494465 TRAV13-2A0A0B4J235 113 aa10.99□□□□□ -0.65
ATG4B-225ENST00000494465 LYSTQ99698 3801 aa10.99□□□□□ -0.65
ATG4B-225ENST00000494465 GVQW2A0A096LPI5 108 aaPredicted RBP10.99□□□□□ -0.65
ATG4B-225ENST00000494465 IGKV2D-24A0A075B6R9 120 aa10.98□□□□□ -0.65
ATG4B-225ENST00000494465 CSMD3Q7Z407 3707 aa10.98□□□□□ -0.65
ATG4B-225ENST00000494465 COX6CP09669 75 aa10.98□□□□□ -0.65
ATG4B-225ENST00000494465 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
ATG4B-225ENST00000494465 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
ATG4B-225ENST00000494465 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
ATG4B-225ENST00000494465 CLEC2BQ92478 149 aa10.97□□□□□ -0.65
ATG4B-225ENST00000494465 Q9HAA7 133 aa10.97□□□□□ -0.65
ATG4B-225ENST00000494465 ETDBQ3ZM63 59 aa10.96□□□□□ -0.66
ATG4B-225ENST00000494465 ZNF561-AS1K7EIQ3 104 aa10.95□□□□□ -0.66
ATG4B-225ENST00000494465 Q8NDZ9 215 aa10.95□□□□□ -0.66
ATG4B-225ENST00000494465 NHLRC4P0CG21 123 aaPredicted RBP10.95□□□□□ -0.66
ATG4B-225ENST00000494465 RPL28P46779 137 aaKnown RBP10.95□□□□□ -0.66
ATG4B-225ENST00000494465 LINC01620Q4KN68 170 aa10.95□□□□□ -0.66
ATG4B-225ENST00000494465 MUC7Q8TAX7 377 aa10.95□□□□□ -0.66
ATG4B-225ENST00000494465 LST1O00453 97 aa10.94□□□□□ -0.66
ATG4B-225ENST00000494465 NDUFC2O95298 119 aa10.94□□□□□ -0.66
ATG4B-225ENST00000494465 APLNQ9ULZ1 77 aa10.94□□□□□ -0.66
ATG4B-225ENST00000494465 C9JAW5 83 aa10.94□□□□□ -0.66
ATG4B-225ENST00000494465 PRR3P79522 188 aaKnown RBP10.94□□□□□ -0.66
ATG4B-225ENST00000494465 MEGF8Q7Z7M0 2845 aa10.93□□□□□ -0.66
ATG4B-225ENST00000494465 SMIM11BQ8TCY0 68 aa10.92□□□□□ -0.66
ATG4B-225ENST00000494465 C2orf48Q96LS8 159 aa10.92□□□□□ -0.66
ATG4B-225ENST00000494465 CAMK2N2Q96S95 79 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms