RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 AMMECR1LQ6DCA0 310 aa8.66□□□□□ -1.02
ERCC3-209ENST00000494464 TMEM101Q96IK0 257 aa8.66□□□□□ -1.02
ERCC3-209ENST00000494464 CDC42SE2Q9NRR3 84 aa8.66□□□□□ -1.02
ERCC3-209ENST00000494464 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.02
ERCC3-209ENST00000494464 TAL2Q16559 108 aa8.65□□□□□ -1.02
ERCC3-209ENST00000494464 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
ERCC3-209ENST00000494464 Q6ZSA8 131 aa8.65□□□□□ -1.02
ERCC3-209ENST00000494464 PLEKHB2Q96CS7 222 aa8.65□□□□□ -1.02
ERCC3-209ENST00000494464 HERVK_113P63121 156 aa8.64□□□□□ -1.03
ERCC3-209ENST00000494464 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
ERCC3-209ENST00000494464 Q5VSD8 79 aa8.64□□□□□ -1.03
ERCC3-209ENST00000494464 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
ERCC3-209ENST00000494464 ZNF815PA8K554 130 aa8.63□□□□□ -1.03
ERCC3-209ENST00000494464 J3QQQ9 107 aa8.63□□□□□ -1.03
ERCC3-209ENST00000494464 TSPEAR-AS2P59090 65 aa8.63□□□□□ -1.03
ERCC3-209ENST00000494464 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
ERCC3-209ENST00000494464 GEMIN7Q9H840 131 aaKnown RBP8.63□□□□□ -1.03
ERCC3-209ENST00000494464 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
ERCC3-209ENST00000494464 A0A1B0GV90 55 aa8.62□□□□□ -1.03
ERCC3-209ENST00000494464 H3BRM9 83 aa8.62□□□□□ -1.03
ERCC3-209ENST00000494464 LGALS3P17931 250 aaKnown RBP8.62□□□□□ -1.03
ERCC3-209ENST00000494464 CLPSL2Q6UWE3 100 aa8.62□□□□□ -1.03
ERCC3-209ENST00000494464 LINC00469Q8N7U9 141 aa8.62□□□□□ -1.03
ERCC3-209ENST00000494464 ORAOV1Q8WV07 137 aa8.62□□□□□ -1.03
ERCC3-209ENST00000494464 VPS13BQ7Z7G8 4022 aa8.62□□□□□ -1.03
ERCC3-209ENST00000494464 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
ERCC3-209ENST00000494464 HAMPP81172 84 aa8.61□□□□□ -1.03
ERCC3-209ENST00000494464 REG3AQ06141 175 aa8.61□□□□□ -1.03
ERCC3-209ENST00000494464 LINC00242Q5T6M2 205 aa8.61□□□□□ -1.03
ERCC3-209ENST00000494464 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
ERCC3-209ENST00000494464 IGLV4-60A0A075B6I1 120 aa8.6□□□□□ -1.03
ERCC3-209ENST00000494464 TRAV8-4A0A0B4J246 113 aa8.6□□□□□ -1.03
ERCC3-209ENST00000494464 A6NDN8 102 aa8.6□□□□□ -1.03
ERCC3-209ENST00000494464 USP17L23D6RBM5 183 aa8.6□□□□□ -1.03
ERCC3-209ENST00000494464 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
ERCC3-209ENST00000494464 SPANXB1Q9NS25 103 aaPredicted RBP8.6□□□□□ -1.03
ERCC3-209ENST00000494464 SCGB1D4Q6XE38 83 aa8.59□□□□□ -1.03
ERCC3-209ENST00000494464 CEND1Q8N111 149 aa8.59□□□□□ -1.03
ERCC3-209ENST00000494464 CDKN2A-AS1Q9UH64 79 aa8.59□□□□□ -1.03
ERCC3-209ENST00000494464 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
ERCC3-209ENST00000494464 IGLV5-39A0A0G2JS06 123 aa8.58□□□□□ -1.04
ERCC3-209ENST00000494464 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
ERCC3-209ENST00000494464 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
ERCC3-209ENST00000494464 IGLV10-54A0A075B6I4 117 aa8.57□□□□□ -1.04
ERCC3-209ENST00000494464 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
ERCC3-209ENST00000494464 SPINK8P0C7L1 97 aa8.57□□□□□ -1.04
ERCC3-209ENST00000494464 COX6A2Q02221 97 aa8.57□□□□□ -1.04
ERCC3-209ENST00000494464 HIST1H4GQ99525 98 aa8.57□□□□□ -1.04
ERCC3-209ENST00000494464 SMIM1B2RUZ4 78 aa8.56□□□□□ -1.04
ERCC3-209ENST00000494464 TAX1BP3O14907 124 aa8.56□□□□□ -1.04
ERCC3-209ENST00000494464 CCL25O15444 150 aa8.56□□□□□ -1.04
ERCC3-209ENST00000494464 INAFM2P0DMQ5 153 aa8.56□□□□□ -1.04
ERCC3-209ENST00000494464 FXYD2P54710 66 aa8.56□□□□□ -1.04
ERCC3-209ENST00000494464 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
ERCC3-209ENST00000494464 TMEM238C9JI98 176 aa8.54□□□□□ -1.04
ERCC3-209ENST00000494464 NDUFA1O15239 70 aa8.54□□□□□ -1.04
ERCC3-209ENST00000494464 NDUFA12Q9UI09 145 aa8.54□□□□□ -1.04
ERCC3-209ENST00000494464 A0A0J9YXY3 114 aa8.53□□□□□ -1.04
ERCC3-209ENST00000494464 LINC00959A0A1B0GUT2 108 aa8.53□□□□□ -1.04
ERCC3-209ENST00000494464 PTTG1IPP53801 180 aa8.53□□□□□ -1.04
ERCC3-209ENST00000494464 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
ERCC3-209ENST00000494464 C9orf163Q8N9P6 203 aa8.53□□□□□ -1.04
ERCC3-209ENST00000494464 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.05
ERCC3-209ENST00000494464 A0A1B0GWB2 263 aa8.52□□□□□ -1.05
ERCC3-209ENST00000494464 A6NJY4 79 aa8.52□□□□□ -1.05
ERCC3-209ENST00000494464 TIMM17BO60830 172 aa8.52□□□□□ -1.05
ERCC3-209ENST00000494464 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
ERCC3-209ENST00000494464 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
ERCC3-209ENST00000494464 LINC01561Q8N1V8 128 aa8.52□□□□□ -1.05
ERCC3-209ENST00000494464 IGHV3OR16-9A0A0B4J2B5 98 aa8.51□□□□□ -1.05
ERCC3-209ENST00000494464 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
ERCC3-209ENST00000494464 SS18Q15532 418 aa8.51□□□□□ -1.05
ERCC3-209ENST00000494464 CIRBP-AS1Q8TBR5 109 aa8.51□□□□□ -1.05
ERCC3-209ENST00000494464 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
ERCC3-209ENST00000494464 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
ERCC3-209ENST00000494464 A0A087WZ39 114 aa8.5□□□□□ -1.05
ERCC3-209ENST00000494464 SMIM13P0DJ93 91 aa8.5□□□□□ -1.05
ERCC3-209ENST00000494464 Q6ZVH6 145 aa8.5□□□□□ -1.05
ERCC3-209ENST00000494464 LITAFQ99732 161 aa8.5□□□□□ -1.05
ERCC3-209ENST00000494464 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
ERCC3-209ENST00000494464 SPANXCQ9NY87 97 aa8.5□□□□□ -1.05
ERCC3-209ENST00000494464 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
ERCC3-209ENST00000494464 C9orf118A6NHY6 69 aa8.49□□□□□ -1.05
ERCC3-209ENST00000494464 NHP2Q9NX24 153 aaKnown RBP8.49□□□□□ -1.05
ERCC3-209ENST00000494464 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
ERCC3-209ENST00000494464 HERV-K104P63124 156 aa8.48□□□□□ -1.05
ERCC3-209ENST00000494464 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
ERCC3-209ENST00000494464 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-209ENST00000494464 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-209ENST00000494464 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-209ENST00000494464 CFAP161Q6P656 301 aa8.48□□□□□ -1.05
ERCC3-209ENST00000494464 SFTA2Q6UW10 78 aa8.48□□□□□ -1.05
ERCC3-209ENST00000494464 K7ERJ3 54 aa8.47□□□□□ -1.05
ERCC3-209ENST00000494464 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
ERCC3-209ENST00000494464 SDIM1Q6ZPB5 146 aa8.47□□□□□ -1.05
ERCC3-209ENST00000494464 COX7B2Q8TF08 81 aa8.47□□□□□ -1.05
ERCC3-209ENST00000494464 GVQW2A0A096LPI5 108 aaPredicted RBP8.46□□□□□ -1.06
ERCC3-209ENST00000494464 SLPIP03973 132 aa8.46□□□□□ -1.06
ERCC3-209ENST00000494464 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
ERCC3-209ENST00000494464 FOXI1Q12951 378 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms