RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 YPEL4Q96NS1 127 aa9.14□□□□□ -0.95
ATG4B-224ENST00000494132 OXTP01178 125 aa9.13□□□□□ -0.95
ATG4B-224ENST00000494132 LINC00614P0C842 121 aa9.13□□□□□ -0.95
ATG4B-224ENST00000494132 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
ATG4B-224ENST00000494132 SEC11AP67812 179 aa9.13□□□□□ -0.95
ATG4B-224ENST00000494132 FAM19A5Q7Z5A7 132 aaPredicted RBP9.13□□□□□ -0.95
ATG4B-224ENST00000494132 CBLN2Q8IUK8 224 aa9.13□□□□□ -0.95
ATG4B-224ENST00000494132 SLC7A5P1Q8MH63 180 aa9.13□□□□□ -0.95
ATG4B-224ENST00000494132 CST9LQ9H4G1 147 aa9.13□□□□□ -0.95
ATG4B-224ENST00000494132 TRBV30A0A0K0K1B3 111 aa9.12□□□□□ -0.95
ATG4B-224ENST00000494132 NDUFA6P56556 154 aa9.12□□□□□ -0.95
ATG4B-224ENST00000494132 CKS1BP61024 79 aa9.12□□□□□ -0.95
ATG4B-224ENST00000494132 PMVKQ15126 192 aa9.12□□□□□ -0.95
ATG4B-224ENST00000494132 C6orf226Q5I0X4 101 aa9.12□□□□□ -0.95
ATG4B-224ENST00000494132 Q8IZM0 81 aa9.12□□□□□ -0.95
ATG4B-224ENST00000494132 TINCRA0A1B0GVN0 87 aa9.11□□□□□ -0.95
ATG4B-224ENST00000494132 SMIM1B2RUZ4 78 aa9.11□□□□□ -0.95
ATG4B-224ENST00000494132 SPINK8P0C7L1 97 aa9.11□□□□□ -0.95
ATG4B-224ENST00000494132 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
ATG4B-224ENST00000494132 HBDP02042 147 aa9.1□□□□□ -0.95
ATG4B-224ENST00000494132 IGLV5-45A0A087WSX0 123 aa9.09□□□□□ -0.95
ATG4B-224ENST00000494132 NDUFC2-KCTD14E9PQ53 114 aa9.09□□□□□ -0.95
ATG4B-224ENST00000494132 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
ATG4B-224ENST00000494132 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
ATG4B-224ENST00000494132 KRTAP11-1Q8IUC1 163 aa9.08□□□□□ -0.96
ATG4B-224ENST00000494132 COX7B2Q8TF08 81 aa9.08□□□□□ -0.96
ATG4B-224ENST00000494132 PSORS1C2Q9UIG4 136 aa9.08□□□□□ -0.96
ATG4B-224ENST00000494132 PDZD11Q5EBL8 140 aa9.07□□□□□ -0.96
ATG4B-224ENST00000494132 XAGE1AQ9HD64 81 aa9.07□□□□□ -0.96
ATG4B-224ENST00000494132 F8VRH5 84 aa9.06□□□□□ -0.96
ATG4B-224ENST00000494132 M0QXV9 152 aa9.06□□□□□ -0.96
ATG4B-224ENST00000494132 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
ATG4B-224ENST00000494132 RAB5BP61020 215 aa9.06□□□□□ -0.96
ATG4B-224ENST00000494132 C1orf137Q5JT78 98 aa9.06□□□□□ -0.96
ATG4B-224ENST00000494132 IGLC3P0DOY3 106 aa9.05□□□□□ -0.96
ATG4B-224ENST00000494132 ZNF22P17026 224 aaPredicted RBP9.04□□□□□ -0.96
ATG4B-224ENST00000494132 CXCL5P42830 114 aa9.04□□□□□ -0.96
ATG4B-224ENST00000494132 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
ATG4B-224ENST00000494132 BAGE3Q86Y29 109 aa9.04□□□□□ -0.96
ATG4B-224ENST00000494132 C11orf86A6NJI1 115 aa9.03□□□□□ -0.96
ATG4B-224ENST00000494132 H3BRM9 83 aa9.03□□□□□ -0.96
ATG4B-224ENST00000494132 ATP5LO75964 103 aa9.03□□□□□ -0.96
ATG4B-224ENST00000494132 TRGC2P03986 189 aa9.03□□□□□ -0.96
ATG4B-224ENST00000494132 UBE2BP63146 152 aa9.03□□□□□ -0.96
ATG4B-224ENST00000494132 SRSF9Q13242 221 aaKnown RBP eCLIP9.03□□□□□ -0.962e-8■■■□□ 15
ATG4B-224ENST00000494132 SPINK6Q6UWN8 80 aa9.03□□□□□ -0.96
ATG4B-224ENST00000494132 FAM19A2Q8N3H0 131 aa9.02□□□□□ -0.97
ATG4B-224ENST00000494132 ODF1Q14990 250 aa9.01□□□□□ -0.97
ATG4B-224ENST00000494132 CHCHD1Q96BP2 118 aaKnown RBP9.01□□□□□ -0.97
ATG4B-224ENST00000494132 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
ATG4B-224ENST00000494132 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
ATG4B-224ENST00000494132 TNXBP22105 4242 aa9□□□□□ -0.97
ATG4B-224ENST00000494132 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
ATG4B-224ENST00000494132 HSBP1O75506 76 aa8.99□□□□□ -0.97
ATG4B-224ENST00000494132 IGLV7-43P04211 117 aa8.99□□□□□ -0.97
ATG4B-224ENST00000494132 LINC01600Q96MT4 127 aa8.99□□□□□ -0.97
ATG4B-224ENST00000494132 REG3GQ6UW15 175 aa8.98□□□□□ -0.97
ATG4B-224ENST00000494132 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
ATG4B-224ENST00000494132 C22orf24Q9Y442 160 aa8.98□□□□□ -0.97
ATG4B-224ENST00000494132 H0Y8G0 127 aa8.97□□□□□ -0.97
ATG4B-224ENST00000494132 PFN2P35080 140 aa8.97□□□□□ -0.97
ATG4B-224ENST00000494132 LINC00310P59036 64 aa8.97□□□□□ -0.97
ATG4B-224ENST00000494132 ZNF625Q96I27 306 aaPredicted RBP8.97□□□□□ -0.97
ATG4B-224ENST00000494132 COLCA2A8K830 154 aa8.96□□□□□ -0.98
ATG4B-224ENST00000494132 SCO1O75880 301 aa8.96□□□□□ -0.98
ATG4B-224ENST00000494132 SERF1AO75920 110 aa8.96□□□□□ -0.98
ATG4B-224ENST00000494132 TRAV12-1A0A0B4J245 112 aa8.94□□□□□ -0.98
ATG4B-224ENST00000494132 NUPR1O60356 82 aa8.94□□□□□ -0.98
ATG4B-224ENST00000494132 GAGE10A6NGK3 116 aa8.93□□□□□ -0.98
ATG4B-224ENST00000494132 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
ATG4B-224ENST00000494132 ERG28Q9UKR5 140 aa8.93□□□□□ -0.98
ATG4B-224ENST00000494132 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
ATG4B-224ENST00000494132 TMEM223A0PJW6 202 aa8.92□□□□□ -0.98
ATG4B-224ENST00000494132 RPL37AP8A6NKH3 93 aa8.92□□□□□ -0.98
ATG4B-224ENST00000494132 LEPROTL1O95214 131 aa8.91□□□□□ -0.98
ATG4B-224ENST00000494132 LBHQ53QV2 105 aaPredicted RBP8.91□□□□□ -0.98
ATG4B-224ENST00000494132 DIRC1Q969H9 104 aa8.91□□□□□ -0.98
ATG4B-224ENST00000494132 LINC00167Q96N53 147 aa8.91□□□□□ -0.98
ATG4B-224ENST00000494132 HMCN2Q8NDA2 5059 aa8.91□□□□□ -0.98
ATG4B-224ENST00000494132 A0A0U1RRA0 63 aa8.9□□□□□ -0.98
ATG4B-224ENST00000494132 H0Y9J4 135 aa8.9□□□□□ -0.98
ATG4B-224ENST00000494132 FABP4P15090 132 aa8.9□□□□□ -0.98
ATG4B-224ENST00000494132 KRTAP10-8P60410 259 aa8.9□□□□□ -0.98
ATG4B-224ENST00000494132 SND1-IT1Q9HBX3 110 aa8.9□□□□□ -0.98
ATG4B-224ENST00000494132 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.98
ATG4B-224ENST00000494132 NKAPP1Q8N9T2 125 aa8.89□□□□□ -0.99
ATG4B-224ENST00000494132 PMCHL2Q9BQD1 86 aa8.88□□□□□ -0.99
ATG4B-224ENST00000494132 PRR26Q8N8Z3 221 aa8.87□□□□□ -0.99
ATG4B-224ENST00000494132 Q8NDZ9 215 aa8.87□□□□□ -0.99
ATG4B-224ENST00000494132 IGLV5-37A0A075B6J1 123 aa8.86□□□□□ -0.99
ATG4B-224ENST00000494132 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
ATG4B-224ENST00000494132 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
ATG4B-224ENST00000494132 VPREB1P12018 145 aa8.86□□□□□ -0.99
ATG4B-224ENST00000494132 LINC00158P58513 81 aa8.86□□□□□ -0.99
ATG4B-224ENST00000494132 ZNF861PO60384 105 aa8.85□□□□□ -0.99
ATG4B-224ENST00000494132 KRTAP1-4P0C5Y4 121 aa8.85□□□□□ -0.99
ATG4B-224ENST00000494132 COX17Q14061 63 aa8.85□□□□□ -0.99
ATG4B-224ENST00000494132 HIST1H2BKO60814 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST1H2BJP06899 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 SMIM13P0DJ93 91 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms