RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 APOC3P02656 99 aa7.69□□□□□ -1.18
HSPG2-212ENST00000493940 LINC00469Q8N7U9 141 aa7.69□□□□□ -1.18
HSPG2-212ENST00000493940 SCGB3A1Q96QR1 104 aa7.69□□□□□ -1.18
HSPG2-212ENST00000493940 NDUFC2-KCTD14E9PQ53 114 aa7.68□□□□□ -1.18
HSPG2-212ENST00000493940 S100PP25815 95 aa7.68□□□□□ -1.18
HSPG2-212ENST00000493940 FABP9Q0Z7S8 132 aa7.68□□□□□ -1.18
HSPG2-212ENST00000493940 C1orf137Q5JT78 98 aa7.68□□□□□ -1.18
HSPG2-212ENST00000493940 SVBPQ8N300 66 aa7.68□□□□□ -1.18
HSPG2-212ENST00000493940 MT-ND6P03923 174 aa7.67□□□□□ -1.18
HSPG2-212ENST00000493940 Q8IZM0 81 aa7.67□□□□□ -1.18
HSPG2-212ENST00000493940 RNF213Q63HN8 5207 aa7.66□□□□□ -1.18
HSPG2-212ENST00000493940 SMIM1B2RUZ4 78 aa7.66□□□□□ -1.18
HSPG2-212ENST00000493940 SNAPINO95295 136 aa7.66□□□□□ -1.18
HSPG2-212ENST00000493940 HERVK_113P63121 156 aa7.66□□□□□ -1.18
HSPG2-212ENST00000493940 RHEBQ15382 184 aa7.66□□□□□ -1.18
HSPG2-212ENST00000493940 C6orf226Q5I0X4 101 aa7.66□□□□□ -1.18
HSPG2-212ENST00000493940 CST9LQ9H4G1 147 aa7.66□□□□□ -1.18
HSPG2-212ENST00000493940 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
HSPG2-212ENST00000493940 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
HSPG2-212ENST00000493940 IGLV7-43P04211 117 aa7.65□□□□□ -1.18
HSPG2-212ENST00000493940 C18orf32Q8TCD1 76 aa7.65□□□□□ -1.18
HSPG2-212ENST00000493940 PACRGQ96M98 296 aaPredicted RBP7.65□□□□□ -1.18
HSPG2-212ENST00000493940 XAGE1AQ9HD64 81 aa7.65□□□□□ -1.18
HSPG2-212ENST00000493940 LPAP08519 4548 aa7.64□□□□□ -1.19
HSPG2-212ENST00000493940 M0QXV9 152 aa7.64□□□□□ -1.19
HSPG2-212ENST00000493940 PRSS2P07478 247 aa7.64□□□□□ -1.19
HSPG2-212ENST00000493940 PMCHL1Q16048 86 aa7.64□□□□□ -1.19
HSPG2-212ENST00000493940 YPEL4Q96NS1 127 aa7.64□□□□□ -1.19
HSPG2-212ENST00000493940 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
HSPG2-212ENST00000493940 SPINK8P0C7L1 97 aa7.63□□□□□ -1.19
HSPG2-212ENST00000493940 G0S2P27469 103 aa7.63□□□□□ -1.19
HSPG2-212ENST00000493940 CKS1BP61024 79 aa7.63□□□□□ -1.19
HSPG2-212ENST00000493940 COX19Q49B96 90 aa7.63□□□□□ -1.19
HSPG2-212ENST00000493940 PAPPA-AS1Q5QFB9 102 aa7.63□□□□□ -1.19
HSPG2-212ENST00000493940 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
HSPG2-212ENST00000493940 FA2HQ7L5A8 372 aa7.63□□□□□ -1.19
HSPG2-212ENST00000493940 TRAPPC1Q9Y5R8 145 aa7.63□□□□□ -1.19
HSPG2-212ENST00000493940 ATP6V1G1O75348 118 aa7.62□□□□□ -1.19
HSPG2-212ENST00000493940 SEC11AP67812 179 aa7.62□□□□□ -1.19
HSPG2-212ENST00000493940 PMVKQ15126 192 aa7.62□□□□□ -1.19
HSPG2-212ENST00000493940 C22orf24Q9Y442 160 aa7.62□□□□□ -1.19
HSPG2-212ENST00000493940 F8VRH5 84 aa7.61□□□□□ -1.19
HSPG2-212ENST00000493940 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
HSPG2-212ENST00000493940 PDZD11Q5EBL8 140 aa7.61□□□□□ -1.19
HSPG2-212ENST00000493940 COX7B2Q8TF08 81 aa7.61□□□□□ -1.19
HSPG2-212ENST00000493940 LINC00614P0C842 121 aa7.6□□□□□ -1.19
HSPG2-212ENST00000493940 PRR26Q8N8Z3 221 aa7.6□□□□□ -1.19
HSPG2-212ENST00000493940 SMCO4Q9NRQ5 59 aa7.6□□□□□ -1.19
HSPG2-212ENST00000493940 H0Y9J4 135 aa7.59□□□□□ -1.19
HSPG2-212ENST00000493940 IGLC3P0DOY3 106 aa7.59□□□□□ -1.19
HSPG2-212ENST00000493940 S100A1P23297 94 aa7.59□□□□□ -1.19
HSPG2-212ENST00000493940 RAB5BP61020 215 aa7.59□□□□□ -1.19
HSPG2-212ENST00000493940 ZNF22P17026 224 aaPredicted RBP7.58□□□□□ -1.2
HSPG2-212ENST00000493940 UBE2BP63146 152 aa7.58□□□□□ -1.2
HSPG2-212ENST00000493940 IGLV5-39A0A0G2JS06 123 aa7.57□□□□□ -1.2
HSPG2-212ENST00000493940 LINC01549A6NIU2 74 aa7.57□□□□□ -1.2
HSPG2-212ENST00000493940 DIRC1Q969H9 104 aa7.57□□□□□ -1.2
HSPG2-212ENST00000493940 SCO1O75880 301 aa7.56□□□□□ -1.2
HSPG2-212ENST00000493940 NDUFA6P56556 154 aa7.56□□□□□ -1.2
HSPG2-212ENST00000493940 C11orf86A6NJI1 115 aa7.55□□□□□ -1.2
HSPG2-212ENST00000493940 HBDP02042 147 aa7.55□□□□□ -1.2
HSPG2-212ENST00000493940 CXCL5P42830 114 aa7.55□□□□□ -1.2
HSPG2-212ENST00000493940 CBLN2Q8IUK8 224 aa7.55□□□□□ -1.2
HSPG2-212ENST00000493940 Q8NDZ9 215 aa7.55□□□□□ -1.2
HSPG2-212ENST00000493940 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
HSPG2-212ENST00000493940 RPL37AP8A6NKH3 93 aa7.54□□□□□ -1.2
HSPG2-212ENST00000493940 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
HSPG2-212ENST00000493940 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
HSPG2-212ENST00000493940 GAGE10A6NGK3 116 aa7.53□□□□□ -1.2
HSPG2-212ENST00000493940 ZNF861PO60384 105 aa7.52□□□□□ -1.21
HSPG2-212ENST00000493940 PFN2P35080 140 aa7.52□□□□□ -1.21
HSPG2-212ENST00000493940 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
HSPG2-212ENST00000493940 TP73-AS1Q9UF72 201 aa7.52□□□□□ -1.21
HSPG2-212ENST00000493940 IGLV5-37A0A075B6J1 123 aa7.51□□□□□ -1.21
HSPG2-212ENST00000493940 H3BRM9 83 aa7.51□□□□□ -1.21
HSPG2-212ENST00000493940 LINC00310P59036 64 aa7.51□□□□□ -1.21
HSPG2-212ENST00000493940 LBHQ53QV2 105 aaPredicted RBP7.5□□□□□ -1.21
HSPG2-212ENST00000493940 FAM19A2Q8N3H0 131 aa7.5□□□□□ -1.21
HSPG2-212ENST00000493940 NUPR1O60356 82 aa7.49□□□□□ -1.21
HSPG2-212ENST00000493940 ATP5LO75964 103 aa7.49□□□□□ -1.21
HSPG2-212ENST00000493940 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
HSPG2-212ENST00000493940 KRTAP13-1Q8IUC0 172 aa7.49□□□□□ -1.21
HSPG2-212ENST00000493940 SND1-IT1Q9HBX3 110 aa7.49□□□□□ -1.21
HSPG2-212ENST00000493940 CHTOPQ9Y3Y2 248 aaKnown RBP7.49□□□□□ -1.21
HSPG2-212ENST00000493940 A0A087X002 238 aa7.48□□□□□ -1.21
HSPG2-212ENST00000493940 BCE1O60756 84 aa7.48□□□□□ -1.21
HSPG2-212ENST00000493940 VPREB1P12018 145 aa7.48□□□□□ -1.21
HSPG2-212ENST00000493940 IFI27L1Q96BM0 104 aa7.48□□□□□ -1.21
HSPG2-212ENST00000493940 ANAPC11Q9NYG5 84 aa7.48□□□□□ -1.21
HSPG2-212ENST00000493940 ERG28Q9UKR5 140 aa7.48□□□□□ -1.21
HSPG2-212ENST00000493940 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
HSPG2-212ENST00000493940 TMEM223A0PJW6 202 aa7.47□□□□□ -1.21
HSPG2-212ENST00000493940 TRGC2P03986 189 aa7.47□□□□□ -1.21
HSPG2-212ENST00000493940 CHCHD1Q96BP2 118 aaKnown RBP7.47□□□□□ -1.21
HSPG2-212ENST00000493940 IGKV2-28A0A075B6P5 120 aa7.46□□□□□ -1.22
HSPG2-212ENST00000493940 TRAV12-1A0A0B4J245 112 aa7.46□□□□□ -1.22
HSPG2-212ENST00000493940 IGKV2D-28P01615 120 aa7.46□□□□□ -1.22
HSPG2-212ENST00000493940 A0A0U1RRA0 63 aa7.45□□□□□ -1.22
HSPG2-212ENST00000493940 TMEM238C9JI98 176 aa7.45□□□□□ -1.22
HSPG2-212ENST00000493940 COLCA2A8K830 154 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms