RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 KMT2AQ03164 3969 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 LOC107984156A0A0G2JMH3 177 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 FAM236AA0A1B0GUQ0 79 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 FAM236BA0A1B0GV22 79 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 A0A1B0GWA3 101 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 ZNF670-ZNF695F2Z2N8 137 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 M0R2P5 195 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 DEFB121Q5J5C9 76 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 CLLU1Q5K131 121 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 NDUFA11Q86Y39 141 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 ARL17AQ8IVW1 177 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 PPP3R2Q96LZ3 170 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 LSM2Q9Y333 95 aaKnown RBP1.84□□□□□ -2.11
GTF3A-208ENST00000493903 DNAH11Q96DT5 4516 aa1.84□□□□□ -2.11
GTF3A-208ENST00000493903 DNAH2Q9P225 4427 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 DOCK11Q5JSL3 2073 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 IGKV3D-7A0A0C4DH55 119 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 IGKV3OR2-268A0A0C4DH90 116 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 H3BUX3 64 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 RRAS2P62070 204 aaPredicted RBP1.83□□□□□ -2.12
GTF3A-208ENST00000493903 PRB3Q04118 309 aaPredicted RBP1.83□□□□□ -2.12
GTF3A-208ENST00000493903 EMX2Q04743 252 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 C10orf128Q5T292 105 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 ATP11AUNQ6ZP68 121 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 LINC00299Q6ZSB3 139 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 VMO1Q7Z5L0 202 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 KRTAP13-1Q8IUC0 172 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 TCTEX1D1Q8N7M0 179 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 C5orf17Q8NAS9 161 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 ATP6V0E2Q8NHE4 81 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 WFDC6Q9BQY6 131 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 DPY30Q9C005 99 aa1.83□□□□□ -2.12
GTF3A-208ENST00000493903 HSPG2P98160 4391 aa1.82□□□□□ -2.12
GTF3A-208ENST00000493903 BBIP1A8MTZ0 92 aa1.82□□□□□ -2.12
GTF3A-208ENST00000493903 CDC42EP2O14613 210 aa1.82□□□□□ -2.12
GTF3A-208ENST00000493903 GEMIN2O14893 280 aaKnown RBP1.82□□□□□ -2.12
GTF3A-208ENST00000493903 NEDD8Q15843 81 aa1.82□□□□□ -2.12
GTF3A-208ENST00000493903 KAAG1Q9UBP8 84 aa1.82□□□□□ -2.12
GTF3A-208ENST00000493903 TRAV2A0A0B4J234 112 aa1.81□□□□□ -2.12
GTF3A-208ENST00000493903 IQCF6A8MYZ5 107 aa1.81□□□□□ -2.12
GTF3A-208ENST00000493903 CCL25O15444 150 aa1.81□□□□□ -2.12
GTF3A-208ENST00000493903 GYPAP02724 150 aa1.81□□□□□ -2.12
GTF3A-208ENST00000493903 GNG11P61952 73 aa1.81□□□□□ -2.12
GTF3A-208ENST00000493903 OR2T2Q6IF00 324 aa1.81□□□□□ -2.12
GTF3A-208ENST00000493903 CCDC167Q9P0B6 97 aa1.81□□□□□ -2.12
GTF3A-208ENST00000493903 TMEM14CQ9P0S9 112 aa1.81□□□□□ -2.12
GTF3A-208ENST00000493903 DNAH17Q9UFH2 4485 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 IGKV2-40A0A087WW87 121 aaPredicted RBP1.8□□□□□ -2.12
GTF3A-208ENST00000493903 A0A0J9YY99 117 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 CPSF4LA6NMK7 179 aaKnown RBP1.8□□□□□ -2.12
GTF3A-208ENST00000493903 M0R1W7 72 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 IGF2P01344 180 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 IGKV2D-40P01614 121 aaPredicted RBP1.8□□□□□ -2.12
GTF3A-208ENST00000493903 ADCYAP1P18509 176 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 S100A3P33764 101 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 C10orf99Q6UWK7 81 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 LINC00322Q6ZN03 302 aaPredicted RBP1.8□□□□□ -2.12
GTF3A-208ENST00000493903 IDO2Q6ZQW0 420 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 SBSPONQ8IVN8 264 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 C4orf33Q8N1A6 199 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 LINC00526Q96FQ7 95 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 GAFA1Q96PS6 74 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 TAS2R8Q9NYW2 309 aa1.8□□□□□ -2.12
GTF3A-208ENST00000493903 IGKV3-7A0A075B6H7 116 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 A0A1B0GV90 55 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 JMJD7-PLA2G4BH0Y9G9 81 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 DLEU1O43261 78 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 GNG7O60262 68 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 TFF1P04155 84 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 PYYP10082 97 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 GUCA1AP43080 201 aaPredicted RBP1.79□□□□□ -2.12
GTF3A-208ENST00000493903 GDF5OSQ5U4N7 250 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 SNX29P2Q8IUI4 249 aa1.79□□□□□ -2.12
GTF3A-208ENST00000493903 NOP16Q9Y3C1 178 aaKnown RBP1.79□□□□□ -2.12
GTF3A-208ENST00000493903 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.12
GTF3A-208ENST00000493903 APOBP04114 4563 aaKnown RBP1.78□□□□□ -2.12
GTF3A-208ENST00000493903 PKD1P98161 4303 aa1.78□□□□□ -2.12
GTF3A-208ENST00000493903 TRBV6-7A0A0A0MS04 114 aa1.78□□□□□ -2.12
GTF3A-208ENST00000493903 J3QLW9 94 aa1.78□□□□□ -2.12
GTF3A-208ENST00000493903 ZNF25P17030 456 aaPredicted RBP1.78□□□□□ -2.12
GTF3A-208ENST00000493903 CAV3P56539 151 aa1.78□□□□□ -2.12
GTF3A-208ENST00000493903 SLC25A26Q70HW3 274 aa1.78□□□□□ -2.12
GTF3A-208ENST00000493903 C2orf88Q9BSF0 95 aa1.78□□□□□ -2.12
GTF3A-208ENST00000493903 FAM25AB3EWG3 89 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 FAM25CB3EWG5 89 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 FAM25GB3EWG6 89 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 DNAL4O96015 105 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 PPYP01298 95 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 CCL3L1P16619 93 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 POLR2JP52435 117 aaKnown RBP1.77□□□□□ -2.13
GTF3A-208ENST00000493903 FXYD6P3P58550 94 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 RHOHQ15669 191 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 LINC01545Q5VT33 79 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 LRP1BQ9NZR2 4599 aa1.77□□□□□ -2.13
GTF3A-208ENST00000493903 M0R135 149 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 IGHV3-30P01768 117 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 IGHV3-30-5P0DP03 117 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 WHAMMP3Q1A5X7 153 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 DEFB136Q30KP8 78 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 MINOS1Q5TGZ0 78 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms