RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 NDUFA1O15239 70 aa7.01□□□□□ -1.29
GPNMB-214ENST00000492858 TRGC2P03986 189 aa7.01□□□□□ -1.29
GPNMB-214ENST00000492858 CRYGAP11844 174 aa7.01□□□□□ -1.29
GPNMB-214ENST00000492858 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
GPNMB-214ENST00000492858 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
GPNMB-214ENST00000492858 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
GPNMB-214ENST00000492858 TCAPO15273 167 aa7□□□□□ -1.29
GPNMB-214ENST00000492858 UNQ6190/PRO20217Q6UXQ8 127 aa7□□□□□ -1.29
GPNMB-214ENST00000492858 ORAOV1Q8WV07 137 aa7□□□□□ -1.29
GPNMB-214ENST00000492858 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
GPNMB-214ENST00000492858 F8WDY8 70 aa6.99□□□□□ -1.29
GPNMB-214ENST00000492858 LINC00173Q6ZV60 143 aa6.99□□□□□ -1.29
GPNMB-214ENST00000492858 MAP1LC3AQ9H492 121 aa6.99□□□□□ -1.29
GPNMB-214ENST00000492858 NXT2Q9NPJ8 142 aaKnown RBP6.99□□□□□ -1.29
GPNMB-214ENST00000492858 FAM104AQ969W3 186 aa6.98□□□□□ -1.29
GPNMB-214ENST00000492858 IFI27P40305 119 aaPredicted RBP6.97□□□□□ -1.29
GPNMB-214ENST00000492858 LINC00310P59036 64 aa6.97□□□□□ -1.29
GPNMB-214ENST00000492858 COA6Q5JTJ3 125 aaKnown RBP6.97□□□□□ -1.29
GPNMB-214ENST00000492858 Q6ZUT4 128 aa6.97□□□□□ -1.29
GPNMB-214ENST00000492858 TIMM21Q9BVV7 248 aa6.97□□□□□ -1.29
GPNMB-214ENST00000492858 ANAPC11Q9NYG5 84 aa6.97□□□□□ -1.29
GPNMB-214ENST00000492858 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
GPNMB-214ENST00000492858 A0A096LNJ9 63 aa6.96□□□□□ -1.3
GPNMB-214ENST00000492858 NUPR1O60356 82 aa6.96□□□□□ -1.3
GPNMB-214ENST00000492858 KRTAP13-2Q52LG2 175 aa6.96□□□□□ -1.3
GPNMB-214ENST00000492858 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.3
GPNMB-214ENST00000492858 KIR2DL4Q99706 377 aa6.96□□□□□ -1.3
GPNMB-214ENST00000492858 PPDPFQ9H3Y8 114 aa6.96□□□□□ -1.3
GPNMB-214ENST00000492858 UBE2D4Q9Y2X8 147 aa6.96□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BKO60814 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BJP06899 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 NPSP0C0P6 89 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 LINC00614P0C842 121 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BOP23527 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BBP33778 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BDP58876 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BCP62807 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 SMAGPQ0VAQ4 97 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST2H2BEQ16778 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-214ENST00000492858 C9orf129Q5T035 196 aaKnown RBP6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BHQ93079 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BNQ99877 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 HIST1H2BMQ99879 126 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 PYGO1Q9Y3Y4 419 aa6.95□□□□□ -1.3
GPNMB-214ENST00000492858 LOC389332A0A1B0GUA5 103 aa6.94□□□□□ -1.3
GPNMB-214ENST00000492858 FCER1GP30273 86 aa6.94□□□□□ -1.3
GPNMB-214ENST00000492858 RPL28P46779 137 aaKnown RBP6.94□□□□□ -1.3
GPNMB-214ENST00000492858 ORMDL2Q53FV1 153 aa6.94□□□□□ -1.3
GPNMB-214ENST00000492858 CHCHD1Q96BP2 118 aaKnown RBP6.94□□□□□ -1.3
GPNMB-214ENST00000492858 IGHV3OR16-9A0A0B4J2B5 98 aa6.93□□□□□ -1.3
GPNMB-214ENST00000492858 LINC01549A6NIU2 74 aa6.93□□□□□ -1.3
GPNMB-214ENST00000492858 IGIPA6NJ69 53 aa6.93□□□□□ -1.3
GPNMB-214ENST00000492858 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
GPNMB-214ENST00000492858 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
GPNMB-214ENST00000492858 RAB5BP61020 215 aa6.92□□□□□ -1.3
GPNMB-214ENST00000492858 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
GPNMB-214ENST00000492858 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
GPNMB-214ENST00000492858 TOMM6Q96B49 74 aa6.92□□□□□ -1.3
GPNMB-214ENST00000492858 C22orf24Q9Y442 160 aa6.92□□□□□ -1.3
GPNMB-214ENST00000492858 BCE1O60756 84 aa6.91□□□□□ -1.3
GPNMB-214ENST00000492858 G0S2P27469 103 aa6.91□□□□□ -1.3
GPNMB-214ENST00000492858 RPL39P62891 51 aaKnown RBP6.91□□□□□ -1.3
GPNMB-214ENST00000492858 PDZD11Q5EBL8 140 aa6.91□□□□□ -1.3
GPNMB-214ENST00000492858 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
GPNMB-214ENST00000492858 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
GPNMB-214ENST00000492858 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.3
GPNMB-214ENST00000492858 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
GPNMB-214ENST00000492858 LBHQ53QV2 105 aaPredicted RBP6.9□□□□□ -1.3
GPNMB-214ENST00000492858 LINC00242Q5T6M2 205 aa6.9□□□□□ -1.3
GPNMB-214ENST00000492858 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.3
GPNMB-214ENST00000492858 FA2HQ7L5A8 372 aa6.9□□□□□ -1.3
GPNMB-214ENST00000492858 TMEM18Q96B42 140 aa6.9□□□□□ -1.3
GPNMB-214ENST00000492858 PACRGQ96M98 296 aaPredicted RBP6.9□□□□□ -1.3
GPNMB-214ENST00000492858 SERF1AO75920 110 aa6.89□□□□□ -1.31
GPNMB-214ENST00000492858 C2orf82Q6UX34 121 aa6.89□□□□□ -1.31
GPNMB-214ENST00000492858 FAM19A3Q7Z5A8 133 aa6.89□□□□□ -1.31
GPNMB-214ENST00000492858 LINC00337Q8N6G1 96 aa6.89□□□□□ -1.31
GPNMB-214ENST00000492858 AMELXQ99217 191 aa6.89□□□□□ -1.31
GPNMB-214ENST00000492858 CYSLTR1Q9Y271 337 aa6.89□□□□□ -1.31
GPNMB-214ENST00000492858 FAM229BQ4G0N7 80 aa6.88□□□□□ -1.31
GPNMB-214ENST00000492858 ERASQ7Z444 233 aa6.88□□□□□ -1.31
GPNMB-214ENST00000492858 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
GPNMB-214ENST00000492858 LINC00469Q8N7U9 141 aa6.88□□□□□ -1.31
GPNMB-214ENST00000492858 IGLV4-3A0A075B6K6 122 aa6.87□□□□□ -1.31
GPNMB-214ENST00000492858 IGKV2D-26A0A0A0MRZ7 120 aa6.87□□□□□ -1.31
GPNMB-214ENST00000492858 HBDP02042 147 aa6.87□□□□□ -1.31
GPNMB-214ENST00000492858 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
GPNMB-214ENST00000492858 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
GPNMB-214ENST00000492858 CTAG1AP78358 180 aa6.86□□□□□ -1.31
GPNMB-214ENST00000492858 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
GPNMB-214ENST00000492858 XAGE1AQ9HD64 81 aa6.86□□□□□ -1.31
GPNMB-214ENST00000492858 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
GPNMB-214ENST00000492858 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
GPNMB-214ENST00000492858 TMEM238LA0A1B0GVL6 79 aa6.84□□□□□ -1.31
GPNMB-214ENST00000492858 HSBP1O75506 76 aa6.84□□□□□ -1.31
GPNMB-214ENST00000492858 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
GPNMB-214ENST00000492858 KRTAP13-3Q3SY46 172 aa6.84□□□□□ -1.31
GPNMB-214ENST00000492858 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
GPNMB-214ENST00000492858 FP248Q71RG6 208 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms