RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 PATE2Q6UY27 113 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 AKAP14Q86UN6 197 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 STOML3Q8TAV4 291 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 SPRR4Q96PI1 79 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 MND1Q9BWT6 205 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 SMDT1Q9H4I9 107 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 FKBP14Q9NWM8 211 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 HIGD1AQ9Y241 93 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 TRBV25-1A0A075B6N4 114 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 PIGBOS1A0A0B4J2F0 54 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 TRDV1A0A1B0GX56 115 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 NAP1L6A6NFF2 107 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 A8MWV9 139 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 ARL6IP5O75915 188 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 PET100P0DJ07 73 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 ZNF22P17026 224 aaPredicted RBP1.5□□□□□ -2.17
UBR4-215ENST00000492606 GADD45AP24522 165 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 XCL1P47992 114 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 ARPC4P59998 168 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 COTL1Q14019 142 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 IQCJQ1A5X6 159 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 CCDC58Q4VC31 144 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 TMEM78Q5T7P6 136 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 RPL22L1Q6P5R6 122 aaKnown RBP1.5□□□□□ -2.17
UBR4-215ENST00000492606 HYLS1Q96M11 299 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 DERL1Q9BUN8 251 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 ARL6Q9H0F7 186 aa1.5□□□□□ -2.17
UBR4-215ENST00000492606 TRAV1-2A0A0B4J238 106 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 TRBV6-1A0A0K0K1D8 114 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 GABARAPH6UMI1 98 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 PDCD5O14737 125 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 SH2D1AO60880 128 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 RNASE3P12724 160 aaKnown RBP1.49□□□□□ -2.17
UBR4-215ENST00000492606 RCVRNP35243 200 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 TAS2R20P59543 309 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 GNG2P59768 71 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 RAB14P61106 215 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 VBP1P61758 197 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 SSBP1Q04837 148 aaKnown RBP1.49□□□□□ -2.17
UBR4-215ENST00000492606 SMAGPQ0VAQ4 97 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 LGALSLQ3ZCW2 172 aaPredicted RBP1.49□□□□□ -2.17
UBR4-215ENST00000492606 FAM74A4Q5TZK3 123 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 TRIQKQ629K1 86 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 TCTE3Q8IZS6 198 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 PDCD10Q9BUL8 212 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 FXYD6Q9H0Q3 95 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 NDUFB11Q9NX14 153 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 OR5AC2Q9NZP5 309 aa1.49□□□□□ -2.17
UBR4-215ENST00000492606 HPGDSO60760 199 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 HYPMO75409 117 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 CDS2O95674 445 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 TCRAP04437 139 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 OR5G3P0C626 314 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 IL7P13232 177 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 FAUP35544 74 aaKnown RBP1.48□□□□□ -2.17
UBR4-215ENST00000492606 ZNF80P51504 273 aaPredicted RBP1.48□□□□□ -2.17
UBR4-215ENST00000492606 SPCS3P61009 180 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 NCS1P62166 190 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 PYDC2Q56P42 97 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 S100A16Q96FQ6 103 aaKnown RBP1.48□□□□□ -2.17
UBR4-215ENST00000492606 DIRAS2Q96HU8 199 aa1.48□□□□□ -2.17
UBR4-215ENST00000492606 TXNL4BQ9NX01 149 aaKnown RBP1.48□□□□□ -2.17
UBR4-215ENST00000492606 IGHV1-24A0A0C4DH33 117 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 LOC107984156A0A0G2JMH3 177 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 HMSDA8MTL9 139 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 INMT-MINDY4F8WBC2 141 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 M0R036 132 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 CCL25O15444 150 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 LYRM1O43325 122 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 IL5P05113 134 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 S100A7P31151 101 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 CSN1S1P47710 185 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 S100A10P60903 97 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 RRAS2P62070 204 aaPredicted RBP1.47□□□□□ -2.17
UBR4-215ENST00000492606 ARL17AQ8IVW1 177 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 TOMM5Q8N4H5 51 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 SMIM12Q96EX1 92 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 SLC25A21Q9BQT8 299 aaPredicted RBP1.47□□□□□ -2.17
UBR4-215ENST00000492606 MED28Q9H204 178 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 KCNIP2Q9NS61 270 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 MED9Q9NWA0 146 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 MRPL35Q9NZE8 188 aaKnown RBP1.47□□□□□ -2.17
UBR4-215ENST00000492606 C6orf48Q9UBA6 75 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 SCP2D1Q9UJQ7 156 aa1.47□□□□□ -2.17
UBR4-215ENST00000492606 LSM2Q9Y333 95 aaKnown RBP1.47□□□□□ -2.17
UBR4-215ENST00000492606 LINC00862A6NCI5 91 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 B4DEV8 164 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 UCHL1P09936 223 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 H2BFSP57053 126 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 LSM3P62310 102 aaKnown RBP1.46□□□□□ -2.18
UBR4-215ENST00000492606 RPS25P62851 125 aaKnown RBP1.46□□□□□ -2.18
UBR4-215ENST00000492606 CLLU1Q5K131 121 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 TEX261Q6UWH6 196 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 Q86TA4 180 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 HIST1H2BAQ96A08 127 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 KRTAP4-3Q9BYR4 195 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 U3KQ87 197 aa1.46□□□□□ -2.18
UBR4-215ENST00000492606 V9GYH0 126 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms