RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 IGLV5-45A0A087WSX0 123 aa4.48□□□□□ -1.69
PDLIM1-204ENST00000492511 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
PDLIM1-204ENST00000492511 RPL18AQ02543 176 aaKnown RBP4.48□□□□□ -1.69
PDLIM1-204ENST00000492511 PMVKQ15126 192 aa4.48□□□□□ -1.69
PDLIM1-204ENST00000492511 C9orf116Q5BN46 136 aaPredicted RBP4.48□□□□□ -1.69
PDLIM1-204ENST00000492511 KRTAP7-1Q8IUC3 87 aa4.48□□□□□ -1.69
PDLIM1-204ENST00000492511 PKIGQ9Y2B9 76 aa4.48□□□□□ -1.69
PDLIM1-204ENST00000492511 FAM168BA1KXE4 195 aa4.47□□□□□ -1.69
PDLIM1-204ENST00000492511 COLCA2A8K830 154 aa4.47□□□□□ -1.69
PDLIM1-204ENST00000492511 SMIM1B2RUZ4 78 aa4.47□□□□□ -1.69
PDLIM1-204ENST00000492511 HBDP02042 147 aa4.47□□□□□ -1.69
PDLIM1-204ENST00000492511 TRGC2P03986 189 aa4.47□□□□□ -1.69
PDLIM1-204ENST00000492511 SEC11AP67812 179 aa4.47□□□□□ -1.69
PDLIM1-204ENST00000492511 Q8IZM0 81 aa4.47□□□□□ -1.69
PDLIM1-204ENST00000492511 GEMIN7Q9H840 131 aaKnown RBP4.47□□□□□ -1.69
PDLIM1-204ENST00000492511 TRBV30A0A0K0K1B3 111 aa4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 IGLC3P0DOY3 106 aa4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 RAB5BP61020 215 aa4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 C6orf226Q5I0X4 101 aa4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 LINC00469Q8N7U9 141 aa4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 C7orf33Q8WU49 177 aa4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 PLA2G2DQ9UNK4 145 aa4.46□□□□□ -1.7
PDLIM1-204ENST00000492511 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 OXTP01178 125 aa4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 PRSS2P07478 247 aa4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 SPINK8P0C7L1 97 aa4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 LINC00310P59036 64 aa4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 GAGE2EQ4V326 116 aa4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 CHCHD1Q96BP2 118 aaKnown RBP4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 PACRGQ96M98 296 aaPredicted RBP4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 GAGE2DQ9UEU5 116 aa4.45□□□□□ -1.7
PDLIM1-204ENST00000492511 IGLV5-39A0A0G2JS06 123 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 NUPR1O60356 82 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 SCO1O75880 301 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 ATP5LO75964 103 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 ZNF22P17026 224 aaPredicted RBP4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 NDUFA6P56556 154 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 CKS1BP61024 79 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 SRSF9Q13242 221 aaKnown RBP eCLIP4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 BAGE3Q86Y29 109 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 FAM19A2Q8N3H0 131 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 COX7B2Q8TF08 81 aa4.44□□□□□ -1.7
PDLIM1-204ENST00000492511 C11orf86A6NJI1 115 aa4.43□□□□□ -1.7
PDLIM1-204ENST00000492511 F8VRH5 84 aa4.43□□□□□ -1.7
PDLIM1-204ENST00000492511 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
PDLIM1-204ENST00000492511 H3BRM9 83 aa4.42□□□□□ -1.7
PDLIM1-204ENST00000492511 SERF1AO75920 110 aa4.42□□□□□ -1.7
PDLIM1-204ENST00000492511 MT1HL1P0DM35 61 aa4.42□□□□□ -1.7
PDLIM1-204ENST00000492511 CXCL5P42830 114 aa4.42□□□□□ -1.7
PDLIM1-204ENST00000492511 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
PDLIM1-204ENST00000492511 IFI27L1Q96BM0 104 aa4.42□□□□□ -1.7
PDLIM1-204ENST00000492511 XAGE1AQ9HD64 81 aa4.42□□□□□ -1.7
PDLIM1-204ENST00000492511 UBR4Q5T4S7 5183 aa4.42□□□□□ -1.7
PDLIM1-204ENST00000492511 TRAV12-1A0A0B4J245 112 aa4.41□□□□□ -1.7
PDLIM1-204ENST00000492511 HSBP1O75506 76 aa4.41□□□□□ -1.7
PDLIM1-204ENST00000492511 CHTOPQ9Y3Y2 248 aaKnown RBP4.41□□□□□ -1.7
PDLIM1-204ENST00000492511 M0QXV9 152 aa4.4□□□□□ -1.71
PDLIM1-204ENST00000492511 TMEM170BQ5T4T1 132 aa4.4□□□□□ -1.71
PDLIM1-204ENST00000492511 SPINK6Q6UWN8 80 aa4.4□□□□□ -1.71
PDLIM1-204ENST00000492511 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
PDLIM1-204ENST00000492511 TMEM223A0PJW6 202 aa4.39□□□□□ -1.71
PDLIM1-204ENST00000492511 ODF1Q14990 250 aa4.39□□□□□ -1.71
PDLIM1-204ENST00000492511 C1orf137Q5JT78 98 aa4.39□□□□□ -1.71
PDLIM1-204ENST00000492511 ZNF625Q96I27 306 aaPredicted RBP4.39□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BKO60814 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 LEPROTL1O95214 131 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 IGLV7-43P04211 117 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BJP06899 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BOP23527 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BBP33778 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BDP58876 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BCP62807 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST2H2BEQ16778 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BHQ93079 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 LINC01600Q96MT4 127 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BNQ99877 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 HIST1H2BMQ99879 126 aa4.38□□□□□ -1.71
PDLIM1-204ENST00000492511 FABP4P15090 132 aa4.37□□□□□ -1.71
PDLIM1-204ENST00000492511 PFN2P35080 140 aa4.37□□□□□ -1.71
PDLIM1-204ENST00000492511 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
PDLIM1-204ENST00000492511 Q8NDZ9 215 aa4.37□□□□□ -1.71
PDLIM1-204ENST00000492511 TP73-AS1Q9UF72 201 aa4.37□□□□□ -1.71
PDLIM1-204ENST00000492511 IGLV5-37A0A075B6J1 123 aa4.36□□□□□ -1.71
PDLIM1-204ENST00000492511 H0Y8G0 127 aa4.36□□□□□ -1.71
PDLIM1-204ENST00000492511 UBE2BP63146 152 aa4.36□□□□□ -1.71
PDLIM1-204ENST00000492511 MRPL55Q7Z7F7 128 aaKnown RBP4.36□□□□□ -1.71
PDLIM1-204ENST00000492511 LINC00167Q96N53 147 aa4.36□□□□□ -1.71
PDLIM1-204ENST00000492511 SND1-IT1Q9HBX3 110 aa4.36□□□□□ -1.71
PDLIM1-204ENST00000492511 HSPB8Q9UJY1 196 aa4.36□□□□□ -1.71
PDLIM1-204ENST00000492511 ERG28Q9UKR5 140 aa4.36□□□□□ -1.71
PDLIM1-204ENST00000492511 VPREB1P12018 145 aa4.35□□□□□ -1.71
PDLIM1-204ENST00000492511 TSPEAR-AS2P59090 65 aa4.35□□□□□ -1.71
PDLIM1-204ENST00000492511 COX17Q14061 63 aa4.35□□□□□ -1.71
PDLIM1-204ENST00000492511 LBHQ53QV2 105 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms