RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 FAM19A5Q7Z5A7 132 aaPredicted RBP7.25□□□□□ -1.25
MDC1-207ENST00000492462 MT-ND6P03923 174 aa7.24□□□□□ -1.25
MDC1-207ENST00000492462 G0S2P27469 103 aa7.24□□□□□ -1.25
MDC1-207ENST00000492462 HERVK_113P63121 156 aa7.24□□□□□ -1.25
MDC1-207ENST00000492462 COX19Q49B96 90 aa7.24□□□□□ -1.25
MDC1-207ENST00000492462 C9orf129Q5T035 196 aaKnown RBP7.24□□□□□ -1.25
MDC1-207ENST00000492462 SPINK6Q6UWN8 80 aa7.24□□□□□ -1.25
MDC1-207ENST00000492462 LINC01600Q96MT4 127 aa7.24□□□□□ -1.25
MDC1-207ENST00000492462 NDUFC2-KCTD14E9PQ53 114 aa7.23□□□□□ -1.25
MDC1-207ENST00000492462 APOC3P02656 99 aa7.23□□□□□ -1.25
MDC1-207ENST00000492462 PAPPA-AS1Q5QFB9 102 aa7.23□□□□□ -1.25
MDC1-207ENST00000492462 FA2HQ7L5A8 372 aa7.23□□□□□ -1.25
MDC1-207ENST00000492462 Q8IZM0 81 aa7.23□□□□□ -1.25
MDC1-207ENST00000492462 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
MDC1-207ENST00000492462 PACRGQ96M98 296 aaPredicted RBP7.23□□□□□ -1.25
MDC1-207ENST00000492462 GEMIN7Q9H840 131 aaKnown RBP7.23□□□□□ -1.25
MDC1-207ENST00000492462 A0A096LNJ9 63 aa7.22□□□□□ -1.25
MDC1-207ENST00000492462 PRSS2P07478 247 aa7.22□□□□□ -1.25
MDC1-207ENST00000492462 CKS1BP61024 79 aa7.22□□□□□ -1.25
MDC1-207ENST00000492462 C6orf226Q5I0X4 101 aa7.22□□□□□ -1.25
MDC1-207ENST00000492462 C1orf137Q5JT78 98 aa7.22□□□□□ -1.25
MDC1-207ENST00000492462 LINC00469Q8N7U9 141 aa7.22□□□□□ -1.25
MDC1-207ENST00000492462 CST9LQ9H4G1 147 aa7.22□□□□□ -1.25
MDC1-207ENST00000492462 SMIM1B2RUZ4 78 aa7.21□□□□□ -1.26
MDC1-207ENST00000492462 SEC11AP67812 179 aa7.21□□□□□ -1.26
MDC1-207ENST00000492462 C18orf32Q8TCD1 76 aa7.21□□□□□ -1.26
MDC1-207ENST00000492462 SMCO4Q9NRQ5 59 aa7.21□□□□□ -1.26
MDC1-207ENST00000492462 TRAPPC1Q9Y5R8 145 aa7.21□□□□□ -1.26
MDC1-207ENST00000492462 MUC2Q02817 5179 aa7.2□□□□□ -1.26
MDC1-207ENST00000492462 IGLV5-45A0A087WSX0 123 aa7.2□□□□□ -1.26
MDC1-207ENST00000492462 TINCRA0A1B0GVN0 87 aa7.2□□□□□ -1.26
MDC1-207ENST00000492462 M0QXV9 152 aa7.2□□□□□ -1.26
MDC1-207ENST00000492462 KRTAP10-8P60410 259 aa7.2□□□□□ -1.26
MDC1-207ENST00000492462 XAGE1AQ9HD64 81 aa7.2□□□□□ -1.26
MDC1-207ENST00000492462 SPINK8P0C7L1 97 aa7.19□□□□□ -1.26
MDC1-207ENST00000492462 PMVKQ15126 192 aa7.19□□□□□ -1.26
MDC1-207ENST00000492462 PMCHL1Q16048 86 aa7.19□□□□□ -1.26
MDC1-207ENST00000492462 REG3GQ6UW15 175 aa7.19□□□□□ -1.26
MDC1-207ENST00000492462 F8VRH5 84 aa7.18□□□□□ -1.26
MDC1-207ENST00000492462 SNAPINO95295 136 aa7.18□□□□□ -1.26
MDC1-207ENST00000492462 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
MDC1-207ENST00000492462 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
MDC1-207ENST00000492462 COX7B2Q8TF08 81 aa7.18□□□□□ -1.26
MDC1-207ENST00000492462 YPEL4Q96NS1 127 aa7.18□□□□□ -1.26
MDC1-207ENST00000492462 LINC01549A6NIU2 74 aa7.17□□□□□ -1.26
MDC1-207ENST00000492462 SVBPQ8N300 66 aa7.17□□□□□ -1.26
MDC1-207ENST00000492462 LINC00614P0C842 121 aa7.16□□□□□ -1.26
MDC1-207ENST00000492462 NDUFA6P56556 154 aa7.16□□□□□ -1.26
MDC1-207ENST00000492462 UBE2BP63146 152 aa7.16□□□□□ -1.26
MDC1-207ENST00000492462 NDUFA5Q16718 116 aa7.16□□□□□ -1.26
MDC1-207ENST00000492462 HBDP02042 147 aa7.15□□□□□ -1.26
MDC1-207ENST00000492462 IGLC3P0DOY3 106 aa7.15□□□□□ -1.26
MDC1-207ENST00000492462 CXCL5P42830 114 aa7.15□□□□□ -1.26
MDC1-207ENST00000492462 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
MDC1-207ENST00000492462 KRTAP3-2Q9BYR7 98 aa7.15□□□□□ -1.26
MDC1-207ENST00000492462 C22orf24Q9Y442 160 aa7.15□□□□□ -1.26
MDC1-207ENST00000492462 ZNF22P17026 224 aaPredicted RBP7.14□□□□□ -1.27
MDC1-207ENST00000492462 RAB5BP61020 215 aa7.14□□□□□ -1.27
MDC1-207ENST00000492462 IGLV5-39A0A0G2JS06 123 aa7.13□□□□□ -1.27
MDC1-207ENST00000492462 CBLN2Q8IUK8 224 aa7.13□□□□□ -1.27
MDC1-207ENST00000492462 DIRC1Q969H9 104 aa7.13□□□□□ -1.27
MDC1-207ENST00000492462 C11orf86A6NJI1 115 aa7.12□□□□□ -1.27
MDC1-207ENST00000492462 H0Y9J4 135 aa7.12□□□□□ -1.27
MDC1-207ENST00000492462 H3BRM9 83 aa7.12□□□□□ -1.27
MDC1-207ENST00000492462 PRR26Q8N8Z3 221 aa7.12□□□□□ -1.27
MDC1-207ENST00000492462 BAGE3Q86Y29 109 aa7.11□□□□□ -1.27
MDC1-207ENST00000492462 ATP5LO75964 103 aa7.1□□□□□ -1.27
MDC1-207ENST00000492462 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
MDC1-207ENST00000492462 GAGE10A6NGK3 116 aa7.09□□□□□ -1.27
MDC1-207ENST00000492462 SCO1O75880 301 aa7.09□□□□□ -1.27
MDC1-207ENST00000492462 PFN2P35080 140 aa7.09□□□□□ -1.27
MDC1-207ENST00000492462 LBHQ53QV2 105 aaPredicted RBP7.09□□□□□ -1.27
MDC1-207ENST00000492462 MRPL55Q7Z7F7 128 aaKnown RBP7.09□□□□□ -1.27
MDC1-207ENST00000492462 SLC7A5P1Q8MH63 180 aa7.09□□□□□ -1.27
MDC1-207ENST00000492462 TP73-AS1Q9UF72 201 aa7.09□□□□□ -1.27
MDC1-207ENST00000492462 RPL37AP8A6NKH3 93 aa7.08□□□□□ -1.28
MDC1-207ENST00000492462 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
MDC1-207ENST00000492462 LINC00167Q96N53 147 aa7.08□□□□□ -1.28
MDC1-207ENST00000492462 ZNF861PO60384 105 aa7.07□□□□□ -1.28
MDC1-207ENST00000492462 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
MDC1-207ENST00000492462 FAM19A2Q8N3H0 131 aa7.07□□□□□ -1.28
MDC1-207ENST00000492462 CHCHD1Q96BP2 118 aaKnown RBP7.07□□□□□ -1.28
MDC1-207ENST00000492462 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
MDC1-207ENST00000492462 IGLV5-37A0A075B6J1 123 aa7.06□□□□□ -1.28
MDC1-207ENST00000492462 NUPR1O60356 82 aa7.06□□□□□ -1.28
MDC1-207ENST00000492462 TRGC2P03986 189 aa7.06□□□□□ -1.28
MDC1-207ENST00000492462 IFI27L1Q96BM0 104 aa7.06□□□□□ -1.28
MDC1-207ENST00000492462 LINC00310P59036 64 aa7.05□□□□□ -1.28
MDC1-207ENST00000492462 Q8NDZ9 215 aa7.05□□□□□ -1.28
MDC1-207ENST00000492462 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
MDC1-207ENST00000492462 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
MDC1-207ENST00000492462 TMEM223A0PJW6 202 aa7.04□□□□□ -1.28
MDC1-207ENST00000492462 BCE1O60756 84 aa7.04□□□□□ -1.28
MDC1-207ENST00000492462 IGLV1-50A0A075B6I6 118 aa7.03□□□□□ -1.28
MDC1-207ENST00000492462 TRAV12-1A0A0B4J245 112 aa7.03□□□□□ -1.28
MDC1-207ENST00000492462 HSBP1O75506 76 aa7.03□□□□□ -1.28
MDC1-207ENST00000492462 VPREB1P12018 145 aa7.03□□□□□ -1.28
MDC1-207ENST00000492462 NKAPP1Q8N9T2 125 aa7.03□□□□□ -1.28
MDC1-207ENST00000492462 LPAP08519 4548 aa7.03□□□□□ -1.28
MDC1-207ENST00000492462 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms