RNA–Protein interactions for RNA: ENST00000491952.1

TTC3-222, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-222ENST00000491952 KNL1Q8NG31 2342 aa-2.37□□□□□ -2.79
TTC3-222ENST00000491952 DNAH11Q96DT5 4516 aa-2.38□□□□□ -2.79
TTC3-222ENST00000491952 WHAMMP3Q1A5X7 153 aa-2.38□□□□□ -2.79
TTC3-222ENST00000491952 COPS9Q8WXC6 57 aa-2.38□□□□□ -2.79
TTC3-222ENST00000491952 ANP32BQ92688 251 aaKnown RBP-2.38□□□□□ -2.79
TTC3-222ENST00000491952 PRO1933Q9H354 126 aa-2.38□□□□□ -2.79
TTC3-222ENST00000491952 COL4A6Q14031 1691 aa-2.38□□□□□ -2.79
TTC3-222ENST00000491952 GRIN2AQ12879 1464 aa-2.39□□□□□ -2.79
TTC3-222ENST00000491952 ZFHX3Q15911 3703 aa-2.39□□□□□ -2.79
TTC3-222ENST00000491952 UBE2D3P61077 147 aa-2.39□□□□□ -2.79
TTC3-222ENST00000491952 UBE2D2P62837 147 aa-2.39□□□□□ -2.79
TTC3-222ENST00000491952 SEC11AP67812 179 aa-2.39□□□□□ -2.79
TTC3-222ENST00000491952 USP9XQ93008 2570 aaPredicted RBP-2.39□□□□□ -2.79
TTC3-222ENST00000491952 REV3LO60673 3130 aa-2.39□□□□□ -2.79
TTC3-222ENST00000491952 APOBP04114 4563 aaKnown RBP-2.4□□□□□ -2.79
TTC3-222ENST00000491952 SMIM21Q3B7S5 101 aa-2.4□□□□□ -2.79
TTC3-222ENST00000491952 LELP1Q5T871 98 aa-2.4□□□□□ -2.79
TTC3-222ENST00000491952 PPP3R2Q96LZ3 170 aa-2.4□□□□□ -2.79
TTC3-222ENST00000491952 A0A0G2JMZ2 1700 aa-2.4□□□□□ -2.79
TTC3-222ENST00000491952 MARF1Q9Y4F3 1742 aaKnown RBP-2.4□□□□□ -2.79
TTC3-222ENST00000491952 MIF4GDA9UHW6 222 aaKnown RBP-2.41□□□□□ -2.8
TTC3-222ENST00000491952 I3L3M4 83 aa-2.41□□□□□ -2.8
TTC3-222ENST00000491952 PYDC1Q8WXC3 89 aa-2.41□□□□□ -2.8
TTC3-222ENST00000491952 NLRP1Q9C000 1473 aa-2.41□□□□□ -2.8
TTC3-222ENST00000491952 XRN1Q8IZH2 1706 aaKnown RBP-2.42□□□□□ -2.8
TTC3-222ENST00000491952 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.42□□□□□ -2.82e-6■■■■□ 24
TTC3-222ENST00000491952 H3BNG1 76 aa-2.42□□□□□ -2.8
TTC3-222ENST00000491952 DR1Q01658 176 aa-2.42□□□□□ -2.8
TTC3-222ENST00000491952 COMMD6Q7Z4G1 85 aa-2.42□□□□□ -2.8
TTC3-222ENST00000491952 UQCR10Q9UDW1 63 aa-2.42□□□□□ -2.8
TTC3-222ENST00000491952 SMG6Q86US8 1419 aaKnown RBP-2.42□□□□□ -2.8
TTC3-222ENST00000491952 DNHD1Q96M86 4753 aa-2.43□□□□□ -2.8
TTC3-222ENST00000491952 PLEKHH2Q8IVE3 1493 aa-2.43□□□□□ -2.8
TTC3-222ENST00000491952 WDR87Q6ZQQ6 2873 aa-2.43□□□□□ -2.8
TTC3-222ENST00000491952 MGAM2Q2M2H8 2515 aa-2.44□□□□□ -2.8
TTC3-222ENST00000491952 ARPC4P59998 168 aa-2.44□□□□□ -2.8
TTC3-222ENST00000491952 SFTA2Q6UW10 78 aa-2.44□□□□□ -2.8
TTC3-222ENST00000491952 SHROOM2Q13796 1616 aa-2.44□□□□□ -2.8
TTC3-222ENST00000491952 SCN7AQ01118 1682 aa-2.44□□□□□ -2.8
TTC3-222ENST00000491952 TRANK1O15050 2925 aa-2.45□□□□□ -2.8
TTC3-222ENST00000491952 CATR1Q13166 79 aa-2.45□□□□□ -2.8
TTC3-222ENST00000491952 C5orf38Q86SI9 138 aa-2.45□□□□□ -2.8
TTC3-222ENST00000491952 SNRNP25Q9BV90 132 aaKnown RBP-2.45□□□□□ -2.8
TTC3-222ENST00000491952 CEP152O94986 1710 aa-2.45□□□□□ -2.8
TTC3-222ENST00000491952 ADGRL2O95490 1459 aa-2.45□□□□□ -2.8
TTC3-222ENST00000491952 CCDC141Q6ZP82 1450 aa-2.45□□□□□ -2.8
TTC3-222ENST00000491952 MYH7P12883 1935 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 EHBP1L1Q8N3D4 1523 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 A0A1B0GU69 56 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 A0A1B0GWA3 101 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 FAM223BA6NKX1 122 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 BTG2P78543 158 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 MEIG1Q5JSS6 88 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 HEPN1Q6WQI6 88 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 ACACAQ13085 2346 aa-2.46□□□□□ -2.8
TTC3-222ENST00000491952 Q56UQ5 140 aa-2.47□□□□□ -2.8
TTC3-222ENST00000491952 PFDN5Q99471 154 aa-2.47□□□□□ -2.8
TTC3-222ENST00000491952 MRPL34Q9BQ48 92 aaKnown RBP-2.47□□□□□ -2.8
TTC3-222ENST00000491952 A0A0C4DFX4 3053 aa-2.48□□□□□ -2.81
TTC3-222ENST00000491952 C8orf59Q8N0T1 100 aaPredicted RBP-2.48□□□□□ -2.81
TTC3-222ENST00000491952 ROBO1Q9Y6N7 1651 aa-2.48□□□□□ -2.81
TTC3-222ENST00000491952 DNAH1Q9P2D7 4330 aa-2.48□□□□□ -2.81
TTC3-222ENST00000491952 WFDC13Q8IUB5 93 aa-2.49□□□□□ -2.81
TTC3-222ENST00000491952 ARL11Q969Q4 196 aa-2.49□□□□□ -2.81
TTC3-222ENST00000491952 NBEAQ8NFP9 2946 aa-2.49□□□□□ -2.81
TTC3-222ENST00000491952 C9orf153Q5TBE3 101 aa-2.5□□□□□ -2.81
TTC3-222ENST00000491952 SACSQ9NZJ4 4579 aa-2.51□□□□□ -2.81
TTC3-222ENST00000491952 TRAV30A0A087WSZ9 112 aa-2.51□□□□□ -2.81
TTC3-222ENST00000491952 MANBALQ9NQG1 85 aa-2.51□□□□□ -2.81
TTC3-222ENST00000491952 TCHHQ07283 1943 aa-2.51□□□□□ -2.81
TTC3-222ENST00000491952 RELNP78509 3460 aa-2.52□□□□□ -2.81
TTC3-222ENST00000491952 FAM25AB3EWG3 89 aa-2.52□□□□□ -2.81
TTC3-222ENST00000491952 FAM25CB3EWG5 89 aa-2.52□□□□□ -2.81
TTC3-222ENST00000491952 FAM25GB3EWG6 89 aa-2.52□□□□□ -2.81
TTC3-222ENST00000491952 NUP188Q5SRE5 1749 aa-2.52□□□□□ -2.81
TTC3-222ENST00000491952 CMYA5Q8N3K9 4069 aa-2.52□□□□□ -2.81
TTC3-222ENST00000491952 DSPP15924 2871 aaKnown RBP-2.52□□□□□ -2.81
TTC3-222ENST00000491952 PKD1L2Q7Z442 2459 aa-2.52□□□□□ -2.81
TTC3-222ENST00000491952 QRICH2Q9H0J4 1663 aa-2.53□□□□□ -2.81
TTC3-222ENST00000491952 APOC2P02655 101 aa-2.53□□□□□ -2.81
TTC3-222ENST00000491952 Q0VG73 95 aa-2.53□□□□□ -2.81
TTC3-222ENST00000491952 C6orf201Q7Z4U5 140 aa-2.53□□□□□ -2.81
TTC3-222ENST00000491952 CDKN2A-AS1Q9UH64 79 aa-2.53□□□□□ -2.81
TTC3-222ENST00000491952 CICQ96RK0 1608 aaPredicted RBP-2.53□□□□□ -2.82
TTC3-222ENST00000491952 COL14A1Q05707 1796 aaKnown RBP-2.54□□□□□ -2.82
TTC3-222ENST00000491952 OOSP1A8MZH6 123 aa-2.54□□□□□ -2.82
TTC3-222ENST00000491952 GNG7O60262 68 aa-2.54□□□□□ -2.82
TTC3-222ENST00000491952 TRAPPC2P0DI81 140 aa-2.54□□□□□ -2.82
TTC3-222ENST00000491952 TRAPPC2BP0DI82 140 aa-2.54□□□□□ -2.82
TTC3-222ENST00000491952 SNCAP37840 140 aa-2.54□□□□□ -2.82
TTC3-222ENST00000491952 GNG11P61952 73 aa-2.54□□□□□ -2.82
TTC3-222ENST00000491952 LINC00846Q9NV44 126 aa-2.54□□□□□ -2.82
TTC3-222ENST00000491952 PHLPP1O60346 1717 aa-2.54□□□□□ -2.82
TTC3-222ENST00000491952 A0A087WVE0 104 aa-2.55□□□□□ -2.82
TTC3-222ENST00000491952 RIF1Q5UIP0 2472 aaKnown RBP-2.55□□□□□ -2.82
TTC3-222ENST00000491952 NCOA3Q9Y6Q9 1424 aa-2.55□□□□□ -2.82
TTC3-222ENST00000491952 CCL22O00626 93 aa-2.56□□□□□ -2.82
TTC3-222ENST00000491952 SAA2P0DJI9 122 aaPredicted RBP-2.56□□□□□ -2.82
TTC3-222ENST00000491952 LINC00470Q9BZP3 86 aa-2.56□□□□□ -2.82
TTC3-222ENST00000491952 UTP20O75691 2785 aaKnown RBP-2.56□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms