RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 CARHSP1Q9Y2V2 147 aaKnown RBP8.51□□□□□ -1.05
NCK1-211ENST00000491539 HERVK_113P63121 156 aa8.5□□□□□ -1.05
NCK1-211ENST00000491539 COX19Q49B96 90 aa8.5□□□□□ -1.05
NCK1-211ENST00000491539 KRTAP11-1Q8IUC1 163 aa8.5□□□□□ -1.05
NCK1-211ENST00000491539 Q8IZM0 81 aa8.5□□□□□ -1.05
NCK1-211ENST00000491539 PACRGQ96M98 296 aaPredicted RBP8.5□□□□□ -1.05
NCK1-211ENST00000491539 CDKN2A-AS1Q9UH64 79 aa8.5□□□□□ -1.05
NCK1-211ENST00000491539 C1orf137Q5JT78 98 aa8.49□□□□□ -1.05
NCK1-211ENST00000491539 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
NCK1-211ENST00000491539 FAM19A5Q7Z5A7 132 aaPredicted RBP8.49□□□□□ -1.05
NCK1-211ENST00000491539 SCGB3A1Q96QR1 104 aa8.49□□□□□ -1.05
NCK1-211ENST00000491539 PRSS2P07478 247 aa8.48□□□□□ -1.05
NCK1-211ENST00000491539 RHEBQ15382 184 aa8.48□□□□□ -1.05
NCK1-211ENST00000491539 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
NCK1-211ENST00000491539 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
NCK1-211ENST00000491539 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
NCK1-211ENST00000491539 CKS1BP61024 79 aa8.47□□□□□ -1.05
NCK1-211ENST00000491539 C6orf226Q5I0X4 101 aa8.47□□□□□ -1.05
NCK1-211ENST00000491539 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
NCK1-211ENST00000491539 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.06
NCK1-211ENST00000491539 M0QXV9 152 aa8.46□□□□□ -1.06
NCK1-211ENST00000491539 IGLV7-43P04211 117 aa8.46□□□□□ -1.06
NCK1-211ENST00000491539 RPS10P5Q9NQ39 176 aa8.46□□□□□ -1.06
NCK1-211ENST00000491539 TINCRA0A1B0GVN0 87 aa8.45□□□□□ -1.06
NCK1-211ENST00000491539 SMIM1B2RUZ4 78 aa8.45□□□□□ -1.06
NCK1-211ENST00000491539 FABP9Q0Z7S8 132 aa8.45□□□□□ -1.06
NCK1-211ENST00000491539 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
NCK1-211ENST00000491539 CST9LQ9H4G1 147 aa8.45□□□□□ -1.06
NCK1-211ENST00000491539 F8VRH5 84 aa8.44□□□□□ -1.06
NCK1-211ENST00000491539 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
NCK1-211ENST00000491539 CXCL5P42830 114 aa8.43□□□□□ -1.06
NCK1-211ENST00000491539 PDZD11Q5EBL8 140 aa8.43□□□□□ -1.06
NCK1-211ENST00000491539 SMCO4Q9NRQ5 59 aa8.43□□□□□ -1.06
NCK1-211ENST00000491539 A0A096LNJ9 63 aa8.42□□□□□ -1.06
NCK1-211ENST00000491539 KRTAP9-6A0A140TA67 174 aa8.42□□□□□ -1.06
NCK1-211ENST00000491539 PMVKQ15126 192 aa8.42□□□□□ -1.06
NCK1-211ENST00000491539 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
NCK1-211ENST00000491539 URB1-AS1Q96HZ7 61 aa8.42□□□□□ -1.06
NCK1-211ENST00000491539 H0Y9J4 135 aa8.41□□□□□ -1.06
NCK1-211ENST00000491539 UBE2BP63146 152 aa8.41□□□□□ -1.06
NCK1-211ENST00000491539 C18orf32Q8TCD1 76 aa8.41□□□□□ -1.06
NCK1-211ENST00000491539 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
NCK1-211ENST00000491539 XAGE1AQ9HD64 81 aa8.41□□□□□ -1.06
NCK1-211ENST00000491539 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
NCK1-211ENST00000491539 TRAPPC1Q9Y5R8 145 aa8.4□□□□□ -1.06
NCK1-211ENST00000491539 APOC3P02656 99 aa8.39□□□□□ -1.07
NCK1-211ENST00000491539 SPINK8P0C7L1 97 aa8.39□□□□□ -1.07
NCK1-211ENST00000491539 C22orf24Q9Y442 160 aa8.39□□□□□ -1.07
NCK1-211ENST00000491539 IGLC3P0DOY3 106 aa8.38□□□□□ -1.07
NCK1-211ENST00000491539 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
NCK1-211ENST00000491539 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
NCK1-211ENST00000491539 TP73-AS1Q9UF72 201 aa8.38□□□□□ -1.07
NCK1-211ENST00000491539 KRTAP1-4P0C5Y4 121 aa8.37□□□□□ -1.07
NCK1-211ENST00000491539 LINC00614P0C842 121 aa8.37□□□□□ -1.07
NCK1-211ENST00000491539 SVBPQ8N300 66 aa8.37□□□□□ -1.07
NCK1-211ENST00000491539 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
NCK1-211ENST00000491539 H3BRM9 83 aa8.36□□□□□ -1.07
NCK1-211ENST00000491539 SNAPINO95295 136 aa8.36□□□□□ -1.07
NCK1-211ENST00000491539 HBDP02042 147 aa8.36□□□□□ -1.07
NCK1-211ENST00000491539 LBHQ53QV2 105 aaPredicted RBP8.36□□□□□ -1.07
NCK1-211ENST00000491539 NUPR1O60356 82 aa8.35□□□□□ -1.07
NCK1-211ENST00000491539 NDUFA5Q16718 116 aa8.35□□□□□ -1.07
NCK1-211ENST00000491539 MRPL55Q7Z7F7 128 aaKnown RBP8.35□□□□□ -1.07
NCK1-211ENST00000491539 YPEL4Q96NS1 127 aa8.35□□□□□ -1.07
NCK1-211ENST00000491539 ZNF861PO60384 105 aa8.34□□□□□ -1.07
NCK1-211ENST00000491539 ZNF22P17026 224 aaPredicted RBP8.34□□□□□ -1.07
NCK1-211ENST00000491539 PMCHL1Q16048 86 aa8.34□□□□□ -1.07
NCK1-211ENST00000491539 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
NCK1-211ENST00000491539 NDUFA6P56556 154 aa8.33□□□□□ -1.08
NCK1-211ENST00000491539 IGLV5-37A0A075B6J1 123 aa8.32□□□□□ -1.08
NCK1-211ENST00000491539 ATP5LO75964 103 aa8.32□□□□□ -1.08
NCK1-211ENST00000491539 RAB5BP61020 215 aa8.32□□□□□ -1.08
NCK1-211ENST00000491539 C11orf86A6NJI1 115 aa8.31□□□□□ -1.08
NCK1-211ENST00000491539 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
NCK1-211ENST00000491539 LINC00167Q96N53 147 aa8.31□□□□□ -1.08
NCK1-211ENST00000491539 BCE1O60756 84 aa8.29□□□□□ -1.08
NCK1-211ENST00000491539 BAGE3Q86Y29 109 aa8.29□□□□□ -1.08
NCK1-211ENST00000491539 RPL37AP8A6NKH3 93 aa8.28□□□□□ -1.08
NCK1-211ENST00000491539 PRR4Q16378 134 aa8.28□□□□□ -1.08
NCK1-211ENST00000491539 CHCHD1Q96BP2 118 aaKnown RBP8.28□□□□□ -1.08
NCK1-211ENST00000491539 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
NCK1-211ENST00000491539 PFN2P35080 140 aa8.27□□□□□ -1.09
NCK1-211ENST00000491539 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
NCK1-211ENST00000491539 ERG28Q9UKR5 140 aa8.27□□□□□ -1.09
NCK1-211ENST00000491539 RPL28P46779 137 aaKnown RBP8.26□□□□□ -1.09
NCK1-211ENST00000491539 COX17Q14061 63 aa8.26□□□□□ -1.09
NCK1-211ENST00000491539 TMEM170BQ5T4T1 132 aa8.26□□□□□ -1.09
NCK1-211ENST00000491539 KRTAP13-1Q8IUC0 172 aa8.26□□□□□ -1.09
NCK1-211ENST00000491539 NKAPP1Q8N9T2 125 aa8.26□□□□□ -1.09
NCK1-211ENST00000491539 ZNF625Q96I27 306 aaPredicted RBP8.26□□□□□ -1.09
NCK1-211ENST00000491539 SND1-IT1Q9HBX3 110 aa8.26□□□□□ -1.09
NCK1-211ENST00000491539 CHTOPQ9Y3Y2 248 aaKnown RBP8.26□□□□□ -1.09
NCK1-211ENST00000491539 TRAV12-1A0A0B4J245 112 aa8.25□□□□□ -1.09
NCK1-211ENST00000491539 VPREB1P12018 145 aa8.25□□□□□ -1.09
NCK1-211ENST00000491539 SFTA2Q6UW10 78 aa8.25□□□□□ -1.09
NCK1-211ENST00000491539 CBLN2Q8IUK8 224 aa8.25□□□□□ -1.09
NCK1-211ENST00000491539 A0A0U1RQV1 116 aa8.24□□□□□ -1.09
NCK1-211ENST00000491539 TMEM223A0PJW6 202 aa8.24□□□□□ -1.09
NCK1-211ENST00000491539 SCO1O75880 301 aa8.24□□□□□ -1.09
NCK1-211ENST00000491539 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms