RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 RBP4P02753 201 aa1.57□□□□□ -2.16
PTPRC-212ENST00000491302 AKR1D1P51857 326 aa1.57□□□□□ -2.16
PTPRC-212ENST00000491302 POLR2JP52435 117 aaKnown RBP1.57□□□□□ -2.16
PTPRC-212ENST00000491302 PLAC4Q8WY50 150 aa1.57□□□□□ -2.16
PTPRC-212ENST00000491302 VPS13DQ5THJ4 4388 aa1.56□□□□□ -2.16
PTPRC-212ENST00000491302 MACF1Q9UPN3 7388 aaKnown RBP1.56□□□□□ -2.16
PTPRC-212ENST00000491302 APOBP04114 4563 aaKnown RBP1.56□□□□□ -2.16
PTPRC-212ENST00000491302 A0A096LNT2 108 aa1.56□□□□□ -2.16
PTPRC-212ENST00000491302 FXYD3Q14802 87 aa1.56□□□□□ -2.16
PTPRC-212ENST00000491302 TAS2R8Q9NYW2 309 aa1.56□□□□□ -2.16
PTPRC-212ENST00000491302 DNAH2Q9P225 4427 aa1.56□□□□□ -2.16
PTPRC-212ENST00000491302 PKHD1L1Q86WI1 4243 aa1.55□□□□□ -2.16
PTPRC-212ENST00000491302 TRAV17A0A0B4J275 112 aa1.55□□□□□ -2.16
PTPRC-212ENST00000491302 HMGA1P17096 107 aaKnown RBP1.55□□□□□ -2.16
PTPRC-212ENST00000491302 ALX1Q15699 326 aa1.55□□□□□ -2.16
PTPRC-212ENST00000491302 SPTY2D1-AS1A0A0U1RR47 76 aa1.54□□□□□ -2.16
PTPRC-212ENST00000491302 C10orf142B7Z368 130 aa1.54□□□□□ -2.16
PTPRC-212ENST00000491302 ZNF137PP52743 207 aa1.54□□□□□ -2.16
PTPRC-212ENST00000491302 GLYATL3Q5SZD4 288 aa1.54□□□□□ -2.16
PTPRC-212ENST00000491302 Q5VSD8 79 aa1.54□□□□□ -2.16
PTPRC-212ENST00000491302 LZICQ8WZA0 190 aa1.54□□□□□ -2.16
PTPRC-212ENST00000491302 VPS25Q9BRG1 176 aa1.54□□□□□ -2.16
PTPRC-212ENST00000491302 TRAV2A0A0B4J234 112 aa1.53□□□□□ -2.16
PTPRC-212ENST00000491302 NBDYA0A0U1RRE5 68 aa1.53□□□□□ -2.16
PTPRC-212ENST00000491302 LOC101927531A0A1B0GV80 90 aa1.53□□□□□ -2.16
PTPRC-212ENST00000491302 IQCJQ1A5X6 159 aa1.53□□□□□ -2.16
PTPRC-212ENST00000491302 PPDPFLQ8WWR9 84 aa1.53□□□□□ -2.16
PTPRC-212ENST00000491302 VPS13BQ7Z7G8 4022 aa1.52□□□□□ -2.17
PTPRC-212ENST00000491302 TRBV10-1A0A0K0K1A3 114 aa1.52□□□□□ -2.17
PTPRC-212ENST00000491302 SPINK13Q1W4C9 94 aa1.52□□□□□ -2.17
PTPRC-212ENST00000491302 SLC25A26Q70HW3 274 aa1.52□□□□□ -2.17
PTPRC-212ENST00000491302 LINC00208Q96KT6 92 aa1.52□□□□□ -2.17
PTPRC-212ENST00000491302 GSKIPQ9P0R6 139 aa1.52□□□□□ -2.17
PTPRC-212ENST00000491302 FAT3Q8TDW7 4589 aa1.51□□□□□ -2.17
PTPRC-212ENST00000491302 ARPC5O15511 151 aa1.51□□□□□ -2.17
PTPRC-212ENST00000491302 SPATA8Q6RVD6 105 aa1.51□□□□□ -2.17
PTPRC-212ENST00000491302 MMGT1Q8N4V1 131 aa1.51□□□□□ -2.17
PTPRC-212ENST00000491302 C5orf56Q8N8D9 126 aa1.51□□□□□ -2.17
PTPRC-212ENST00000491302 ATP6V0E2Q8NHE4 81 aa1.51□□□□□ -2.17
PTPRC-212ENST00000491302 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
PTPRC-212ENST00000491302 DNAH6Q9C0G6 4158 aa1.51□□□□□ -2.17
PTPRC-212ENST00000491302 PKD1P98161 4303 aa1.5□□□□□ -2.17
PTPRC-212ENST00000491302 DNAH5Q8TE73 4624 aa1.5□□□□□ -2.17
PTPRC-212ENST00000491302 A0A0D9SG42 100 aa1.5□□□□□ -2.17
PTPRC-212ENST00000491302 DEFB108AA8MXU0 73 aa1.5□□□□□ -2.17
PTPRC-212ENST00000491302 UQCRHP07919 91 aa1.5□□□□□ -2.17
PTPRC-212ENST00000491302 LRP1BQ9NZR2 4599 aa1.49□□□□□ -2.17
PTPRC-212ENST00000491302 CLPSL1A2RUU4 121 aa1.49□□□□□ -2.17
PTPRC-212ENST00000491302 CKS1BP61024 79 aa1.49□□□□□ -2.17
PTPRC-212ENST00000491302 CLLU1Q5K131 121 aa1.49□□□□□ -2.17
PTPRC-212ENST00000491302 SNX29P2Q8IUI4 249 aa1.49□□□□□ -2.17
PTPRC-212ENST00000491302 CCKP06307 115 aa1.48□□□□□ -2.17
PTPRC-212ENST00000491302 KRTAP2-3P0C7H8 128 aa1.48□□□□□ -2.17
PTPRC-212ENST00000491302 KRTAP2-4Q9BYR9 128 aa1.48□□□□□ -2.17
PTPRC-212ENST00000491302 NOP16Q9Y3C1 178 aaKnown RBP1.48□□□□□ -2.17
PTPRC-212ENST00000491302 USH2AO75445 5202 aa1.48□□□□□ -2.17
PTPRC-212ENST00000491302 KMT2DO14686 5537 aa1.47□□□□□ -2.17
PTPRC-212ENST00000491302 FXYD1O00168 92 aa1.47□□□□□ -2.17
PTPRC-212ENST00000491302 APOC1P02654 83 aa1.47□□□□□ -2.17
PTPRC-212ENST00000491302 NCS1P62166 190 aa1.47□□□□□ -2.17
PTPRC-212ENST00000491302 TNFP01375 233 aa1.46□□□□□ -2.18
PTPRC-212ENST00000491302 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.18
PTPRC-212ENST00000491302 LRP1Q07954 4544 aaKnown RBP1.46□□□□□ -2.18
PTPRC-212ENST00000491302 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
PTPRC-212ENST00000491302 ZNF56Q15929 161 aa1.45□□□□□ -2.18
PTPRC-212ENST00000491302 ATP11AUNQ6ZP68 121 aa1.45□□□□□ -2.18
PTPRC-212ENST00000491302 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
PTPRC-212ENST00000491302 DYNLRB2Q8TF09 96 aa1.45□□□□□ -2.18
PTPRC-212ENST00000491302 LOC105371267A0A1B0GV96 52 aa1.44□□□□□ -2.18
PTPRC-212ENST00000491302 HIST1H1AQ02539 215 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-212ENST00000491302 MAFIPQ8WZ33 124 aa1.44□□□□□ -2.18
PTPRC-212ENST00000491302 CXorf51AA0A1B0GTR3 108 aa1.43□□□□□ -2.18
PTPRC-212ENST00000491302 M0R2P5 195 aa1.43□□□□□ -2.18
PTPRC-212ENST00000491302 SMR3BP02814 79 aaPredicted RBP1.43□□□□□ -2.18
PTPRC-212ENST00000491302 KLKP1Q107X0 134 aa1.43□□□□□ -2.18
PTPRC-212ENST00000491302 LSM2Q9Y333 95 aaKnown RBP1.43□□□□□ -2.18
PTPRC-212ENST00000491302 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
PTPRC-212ENST00000491302 TEX49A0A1B0GTD5 131 aa1.42□□□□□ -2.18
PTPRC-212ENST00000491302 J3QLW9 94 aa1.42□□□□□ -2.18
PTPRC-212ENST00000491302 TCHHQ07283 1943 aa1.42□□□□□ -2.18
PTPRC-212ENST00000491302 DOCK11Q5JSL3 2073 aa1.41□□□□□ -2.18
PTPRC-212ENST00000491302 TNXBP22105 4242 aa1.41□□□□□ -2.18
PTPRC-212ENST00000491302 J3QR89 54 aa1.41□□□□□ -2.18
PTPRC-212ENST00000491302 BPESC1Q9GZL8 116 aa1.41□□□□□ -2.18
PTPRC-212ENST00000491302 LPAP08519 4548 aa1.41□□□□□ -2.18
PTPRC-212ENST00000491302 TRBV20-1A0A075B6N2 111 aa1.4□□□□□ -2.19
PTPRC-212ENST00000491302 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.19
PTPRC-212ENST00000491302 WFDC9Q8NEX5 89 aa1.4□□□□□ -2.19
PTPRC-212ENST00000491302 PPP1R1CQ8WVI7 109 aa1.4□□□□□ -2.19
PTPRC-212ENST00000491302 KRTAP2-1Q9BYU5 128 aa1.4□□□□□ -2.19
PTPRC-212ENST00000491302 SMIM3Q9BZL3 60 aa1.4□□□□□ -2.19
PTPRC-212ENST00000491302 ANKRD36A6QL64 1941 aa1.4□□□□□ -2.19
PTPRC-212ENST00000491302 NDUFA11Q86Y39 141 aa1.39□□□□□ -2.19
PTPRC-212ENST00000491302 DEFB104AQ8WTQ1 72 aa1.39□□□□□ -2.19
PTPRC-212ENST00000491302 SAR1AQ9NR31 198 aa1.39□□□□□ -2.19
PTPRC-212ENST00000491302 M0R2Z0 102 aa1.38□□□□□ -2.19
PTPRC-212ENST00000491302 TSPAN19P0C672 248 aa1.38□□□□□ -2.19
PTPRC-212ENST00000491302 IGLC6P0CF74 106 aa1.38□□□□□ -2.19
PTPRC-212ENST00000491302 TMEM14BQ9NUH8 114 aa1.38□□□□□ -2.19
PTPRC-212ENST00000491302 FAIMQ9NVQ4 179 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms