RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 YPEL4Q96NS1 127 aa9.42□□□□□ -0.9
COL27A1-206ENST00000490831 CST9LQ9H4G1 147 aa9.42□□□□□ -0.9
COL27A1-206ENST00000490831 A0A096LNJ9 63 aa9.41□□□□□ -0.9
COL27A1-206ENST00000490831 PRSS2P07478 247 aa9.41□□□□□ -0.9
COL27A1-206ENST00000490831 SRSF9Q13242 221 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL27A1-206ENST00000490831 PACRGQ96M98 296 aaPredicted RBP9.41□□□□□ -0.9
COL27A1-206ENST00000490831 LINC00614P0C842 121 aa9.4□□□□□ -0.9
COL27A1-206ENST00000490831 PMVKQ15126 192 aa9.4□□□□□ -0.9
COL27A1-206ENST00000490831 C6orf226Q5I0X4 101 aa9.4□□□□□ -0.9
COL27A1-206ENST00000490831 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
COL27A1-206ENST00000490831 CKS1BP61024 79 aa9.39□□□□□ -0.91
COL27A1-206ENST00000490831 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
COL27A1-206ENST00000490831 SPINK6Q6UWN8 80 aa9.39□□□□□ -0.91
COL27A1-206ENST00000490831 PHF5AQ7RTV0 110 aaKnown RBP9.39□□□□□ -0.91
COL27A1-206ENST00000490831 KRTAP7-1Q8IUC3 87 aa9.39□□□□□ -0.91
COL27A1-206ENST00000490831 LINC00469Q8N7U9 141 aa9.39□□□□□ -0.91
COL27A1-206ENST00000490831 TOMM7Q9P0U1 55 aa9.39□□□□□ -0.91
COL27A1-206ENST00000490831 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
COL27A1-206ENST00000490831 FAM168BA1KXE4 195 aa9.38□□□□□ -0.91
COL27A1-206ENST00000490831 CXCL5P42830 114 aa9.38□□□□□ -0.91
COL27A1-206ENST00000490831 PDZD11Q5EBL8 140 aa9.38□□□□□ -0.91
COL27A1-206ENST00000490831 SERTAD4-AS1Q5TG53 156 aa9.38□□□□□ -0.91
COL27A1-206ENST00000490831 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
COL27A1-206ENST00000490831 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
COL27A1-206ENST00000490831 TNXBP22105 4242 aa9.37□□□□□ -0.91
COL27A1-206ENST00000490831 F8VRH5 84 aa9.37□□□□□ -0.91
COL27A1-206ENST00000490831 C9orf129Q5T035 196 aaKnown RBP9.37□□□□□ -0.91
COL27A1-206ENST00000490831 HBDP02042 147 aa9.36□□□□□ -0.91
COL27A1-206ENST00000490831 RAB5BP61020 215 aa9.36□□□□□ -0.91
COL27A1-206ENST00000490831 LINC01600Q96MT4 127 aa9.36□□□□□ -0.91
COL27A1-206ENST00000490831 IGLC3P0DOY3 106 aa9.35□□□□□ -0.91
COL27A1-206ENST00000490831 ODF1Q14990 250 aa9.35□□□□□ -0.91
COL27A1-206ENST00000490831 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
COL27A1-206ENST00000490831 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
COL27A1-206ENST00000490831 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
COL27A1-206ENST00000490831 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
COL27A1-206ENST00000490831 H3BRM9 83 aa9.32□□□□□ -0.92
COL27A1-206ENST00000490831 M0QXV9 152 aa9.32□□□□□ -0.92
COL27A1-206ENST00000490831 ATP5LO75964 103 aa9.32□□□□□ -0.92
COL27A1-206ENST00000490831 SPINK8P0C7L1 97 aa9.32□□□□□ -0.92
COL27A1-206ENST00000490831 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
COL27A1-206ENST00000490831 IGLV5-39A0A0G2JS06 123 aa9.31□□□□□ -0.92
COL27A1-206ENST00000490831 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
COL27A1-206ENST00000490831 CBLN2Q8IUK8 224 aa9.31□□□□□ -0.92
COL27A1-206ENST00000490831 CHCHD1Q96BP2 118 aaKnown RBP9.31□□□□□ -0.92
COL27A1-206ENST00000490831 ZNF22P17026 224 aaPredicted RBP9.3□□□□□ -0.92
COL27A1-206ENST00000490831 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
COL27A1-206ENST00000490831 NDUFA6P56556 154 aa9.29□□□□□ -0.92
COL27A1-206ENST00000490831 XAGE1AQ9HD64 81 aa9.29□□□□□ -0.92
COL27A1-206ENST00000490831 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
COL27A1-206ENST00000490831 BAGE3Q86Y29 109 aa9.27□□□□□ -0.93
COL27A1-206ENST00000490831 SLC7A5P1Q8MH63 180 aa9.27□□□□□ -0.93
COL27A1-206ENST00000490831 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
COL27A1-206ENST00000490831 C22orf24Q9Y442 160 aa9.27□□□□□ -0.93
COL27A1-206ENST00000490831 C11orf86A6NJI1 115 aa9.26□□□□□ -0.93
COL27A1-206ENST00000490831 UBE2BP63146 152 aa9.26□□□□□ -0.93
COL27A1-206ENST00000490831 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
COL27A1-206ENST00000490831 TRAV12-1A0A0B4J245 112 aa9.25□□□□□ -0.93
COL27A1-206ENST00000490831 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
COL27A1-206ENST00000490831 TRGC2P03986 189 aa9.24□□□□□ -0.93
COL27A1-206ENST00000490831 LBHQ53QV2 105 aaPredicted RBP9.24□□□□□ -0.93
COL27A1-206ENST00000490831 IFI27L1Q96BM0 104 aa9.24□□□□□ -0.93
COL27A1-206ENST00000490831 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
COL27A1-206ENST00000490831 H0Y9J4 135 aa9.23□□□□□ -0.93
COL27A1-206ENST00000490831 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
COL27A1-206ENST00000490831 NUPR1O60356 82 aa9.22□□□□□ -0.93
COL27A1-206ENST00000490831 TMEM170BQ5T4T1 132 aa9.22□□□□□ -0.93
COL27A1-206ENST00000490831 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
COL27A1-206ENST00000490831 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
COL27A1-206ENST00000490831 HSBP1O75506 76 aa9.21□□□□□ -0.94
COL27A1-206ENST00000490831 COLCA2A8K830 154 aa9.2□□□□□ -0.94
COL27A1-206ENST00000490831 LINC00310P59036 64 aa9.2□□□□□ -0.94
COL27A1-206ENST00000490831 COX17Q14061 63 aa9.2□□□□□ -0.94
COL27A1-206ENST00000490831 FAM19A2Q8N3H0 131 aa9.2□□□□□ -0.94
COL27A1-206ENST00000490831 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
COL27A1-206ENST00000490831 TMEM223A0PJW6 202 aa9.19□□□□□ -0.94
COL27A1-206ENST00000490831 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
COL27A1-206ENST00000490831 ZNF861PO60384 105 aa9.18□□□□□ -0.94
COL27A1-206ENST00000490831 KRTAP1-4P0C5Y4 121 aa9.18□□□□□ -0.94
COL27A1-206ENST00000490831 PFN2P35080 140 aa9.18□□□□□ -0.94
COL27A1-206ENST00000490831 LINC00167Q96N53 147 aa9.18□□□□□ -0.94
COL27A1-206ENST00000490831 SERF1AO75920 110 aa9.17□□□□□ -0.94
COL27A1-206ENST00000490831 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
COL27A1-206ENST00000490831 BCE1O60756 84 aa9.15□□□□□ -0.94
COL27A1-206ENST00000490831 LEPROTL1O95214 131 aa9.15□□□□□ -0.94
COL27A1-206ENST00000490831 IGLV1-50A0A075B6I6 118 aa9.14□□□□□ -0.95
COL27A1-206ENST00000490831 VPREB1P12018 145 aa9.14□□□□□ -0.95
COL27A1-206ENST00000490831 NKAPP1Q8N9T2 125 aa9.14□□□□□ -0.95
COL27A1-206ENST00000490831 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
COL27A1-206ENST00000490831 PRR26Q8N8Z3 221 aa9.13□□□□□ -0.95
COL27A1-206ENST00000490831 GAGE10A6NGK3 116 aa9.12□□□□□ -0.95
COL27A1-206ENST00000490831 UBR4Q5T4S7 5183 aa9.11□□□□□ -0.95
COL27A1-206ENST00000490831 RPL28P46779 137 aaKnown RBP9.11□□□□□ -0.95
COL27A1-206ENST00000490831 RPL24P83731 157 aaKnown RBP9.11□□□□□ -0.95
COL27A1-206ENST00000490831 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
COL27A1-206ENST00000490831 Q8NDZ9 215 aa9.11□□□□□ -0.95
COL27A1-206ENST00000490831 HSPB8Q9UJY1 196 aa9.11□□□□□ -0.95
COL27A1-206ENST00000490831 SCO1O75880 301 aa9.1□□□□□ -0.95
COL27A1-206ENST00000490831 LRP2P98164 4655 aa9.09□□□□□ -0.95
COL27A1-206ENST00000490831 PLNP26678 52 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms