RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, human

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ALMS1-205	ENST00000490821	MED9	Q9NWA0	146 aa		4.3	□□□□□ -1.72
ALMS1-205	ENST00000490821	MACF1	Q9UPN3	7388 aa	Known RBP	4.3	□□□□□ -1.72
ALMS1-205	ENST00000490821	PDE6D	O43924	150 aa		4.29	□□□□□ -1.72
ALMS1-205	ENST00000490821	PRLH	P81277	87 aa		4.29	□□□□□ -1.72
ALMS1-205	ENST00000490821	PNRC1	Q12796	327 aa	Predicted RBP	4.29	□□□□□ -1.72
ALMS1-205	ENST00000490821	PLEKHB2	Q96CS7	222 aa		4.29	□□□□□ -1.72
ALMS1-205	ENST00000490821	SPANXA1	Q9NS26	97 aa		4.29	□□□□□ -1.72
ALMS1-205	ENST00000490821		A0A1B0GVG6	124 aa		4.28	□□□□□ -1.72
ALMS1-205	ENST00000490821		M0R2T5	61 aa		4.28	□□□□□ -1.72
ALMS1-205	ENST00000490821	LINC01561	Q8N1V8	128 aa		4.28	□□□□□ -1.72
ALMS1-205	ENST00000490821	DAND5	Q8N907	189 aa		4.28	□□□□□ -1.72
ALMS1-205	ENST00000490821	IGLV5-37	A0A075B6J1	123 aa		4.27	□□□□□ -1.73
ALMS1-205	ENST00000490821		A0A1B0GUT8	65 aa		4.27	□□□□□ -1.73
ALMS1-205	ENST00000490821		A8MWL6	223 aa		4.27	□□□□□ -1.73
ALMS1-205	ENST00000490821	PPP1R2P9	O14990	202 aa		4.27	□□□□□ -1.73
ALMS1-205	ENST00000490821	GATC	O43716	136 aa	Known RBP	4.27	□□□□□ -1.73
ALMS1-205	ENST00000490821	PPP1R17	O96001	155 aa		4.27	□□□□□ -1.73
ALMS1-205	ENST00000490821	CKS1B	P61024	79 aa		4.27	□□□□□ -1.73
ALMS1-205	ENST00000490821	NDUFA13	Q9P0J0	144 aa		4.27	□□□□□ -1.73
ALMS1-205	ENST00000490821	IGLV8-61	A0A075B6I0	122 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	IGKV2-28	A0A075B6P5	120 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	HIGD1C	A8MV81	97 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	SCO1	O75880	301 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	IGKV2D-28	P01615	120 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	PRSS2	P07478	247 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	CT83	Q5H943	113 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	FAM231D	Q6ZW35	169 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821		Q8IZM0	81 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821		Q8NBF4	154 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	BORCS7	Q96B45	105 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	TOMM7	Q9P0U1	55 aa		4.26	□□□□□ -1.73
ALMS1-205	ENST00000490821	IGLV4-3	A0A075B6K6	122 aa		4.25	□□□□□ -1.73
ALMS1-205	ENST00000490821	TRBV24-1	A0A075B6N3	115 aa		4.25	□□□□□ -1.73
ALMS1-205	ENST00000490821	SPINK1	P00995	79 aa		4.25	□□□□□ -1.73
ALMS1-205	ENST00000490821	ZNF345	Q14585	488 aa		4.25	□□□□□ -1.73
ALMS1-205	ENST00000490821	PCOTH	Q58A44	107 aa		4.25	□□□□□ -1.73
ALMS1-205	ENST00000490821	FAM19A1	Q7Z5A9	133 aa		4.25	□□□□□ -1.73
ALMS1-205	ENST00000490821	C20orf78	Q9BR46	151 aa		4.25	□□□□□ -1.73
ALMS1-205	ENST00000490821	TMEM238	C9JI98	176 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821		F8VRH5	84 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	SMLR1	H3BR10	107 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	TCAP	O15273	167 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	MRPL51	Q4U2R6	128 aa	Known RBP	4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	C6orf226	Q5I0X4	101 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821		Q6ZN92	141 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821		Q8N377	158 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	SPRR4	Q96PI1	79 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	SMIM2	Q9BVW6	85 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	TMEM126A	Q9H061	195 aa		4.24	□□□□□ -1.73
ALMS1-205	ENST00000490821	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.23	□□□□□ -1.73
ALMS1-205	ENST00000490821	IFI27	P40305	119 aa	Predicted RBP	4.23	□□□□□ -1.73
ALMS1-205	ENST00000490821	ZC2HC1B	Q5TFG8	222 aa		4.23	□□□□□ -1.73
ALMS1-205	ENST00000490821	KRTAP5-3	Q6L8H2	238 aa		4.23	□□□□□ -1.73
ALMS1-205	ENST00000490821	CBLN2	Q8IUK8	224 aa		4.23	□□□□□ -1.73
ALMS1-205	ENST00000490821	NKAPP1	Q8N9T2	125 aa		4.23	□□□□□ -1.73
ALMS1-205	ENST00000490821	NDUFA12	Q9UI09	145 aa		4.23	□□□□□ -1.73
ALMS1-205	ENST00000490821	PYGO1	Q9Y3Y4	419 aa		4.23	□□□□□ -1.73
ALMS1-205	ENST00000490821		M0R378	163 aa		4.22	□□□□□ -1.73
ALMS1-205	ENST00000490821	FAM104B	Q5XKR9	115 aa		4.22	□□□□□ -1.73
ALMS1-205	ENST00000490821	TMEM141	Q96I45	108 aa		4.22	□□□□□ -1.73
ALMS1-205	ENST00000490821	GNB1L	Q9BYB4	327 aa		4.22	□□□□□ -1.73
ALMS1-205	ENST00000490821	EIF5A2	Q9GZV4	153 aa	Known RBP	4.22	□□□□□ -1.73
ALMS1-205	ENST00000490821	LINC00862	A6NCI5	91 aa		4.21	□□□□□ -1.74
ALMS1-205	ENST00000490821	TEX46	H3BTG2	121 aa		4.21	□□□□□ -1.74
ALMS1-205	ENST00000490821	RPS29	P62273	56 aa	Known RBP	4.21	□□□□□ -1.74
ALMS1-205	ENST00000490821	RIG	Q13278	110 aa		4.21	□□□□□ -1.74
ALMS1-205	ENST00000490821	TEX43	Q6ZNM6	134 aa		4.21	□□□□□ -1.74
ALMS1-205	ENST00000490821	FAM19A2	Q8N3H0	131 aa		4.21	□□□□□ -1.74
ALMS1-205	ENST00000490821	HIGD2A	Q9BW72	106 aa		4.21	□□□□□ -1.74
ALMS1-205	ENST00000490821	KANTR	A0A1W2PQU2	76 aa		4.2	□□□□□ -1.74
ALMS1-205	ENST00000490821	NPY	P01303	97 aa		4.2	□□□□□ -1.74
ALMS1-205	ENST00000490821	CKS2	P33552	79 aa		4.2	□□□□□ -1.74
ALMS1-205	ENST00000490821	CXCL5	P42830	114 aa		4.2	□□□□□ -1.74
ALMS1-205	ENST00000490821	FAM19A3	Q7Z5A8	133 aa		4.2	□□□□□ -1.74
ALMS1-205	ENST00000490821	AMELX	Q99217	191 aa		4.2	□□□□□ -1.74
ALMS1-205	ENST00000490821	CDKN2A-AS1	Q9UH64	79 aa		4.2	□□□□□ -1.74
ALMS1-205	ENST00000490821	SLC25A20	O43772	301 aa		4.19	□□□□□ -1.74
ALMS1-205	ENST00000490821	VPREB1	P12018	145 aa		4.19	□□□□□ -1.74
ALMS1-205	ENST00000490821	TAGLN2	P37802	199 aa	Known RBP	4.19	□□□□□ -1.74
ALMS1-205	ENST00000490821	C2orf88	Q9BSF0	95 aa		4.19	□□□□□ -1.74
ALMS1-205	ENST00000490821	HMSD	A8MTL9	139 aa		4.18	□□□□□ -1.74
ALMS1-205	ENST00000490821		D6R8Y8	96 aa		4.18	□□□□□ -1.74
ALMS1-205	ENST00000490821	RAB5B	P61020	215 aa		4.18	□□□□□ -1.74
ALMS1-205	ENST00000490821	C2orf66	Q6UXQ4	117 aa		4.18	□□□□□ -1.74
ALMS1-205	ENST00000490821	COX6B2	Q6YFQ2	88 aa		4.18	□□□□□ -1.74
ALMS1-205	ENST00000490821	LINC01551	Q86U37	167 aa		4.18	□□□□□ -1.74
ALMS1-205	ENST00000490821	OSTC	Q9NRP0	149 aa		4.18	□□□□□ -1.74
ALMS1-205	ENST00000490821		V9GYV3	84 aa		4.18	□□□□□ -1.74
ALMS1-205	ENST00000490821	TMEM250	H0YL14	139 aa		4.17	□□□□□ -1.74
ALMS1-205	ENST00000490821	KRTAP15-1	Q3LI76	137 aa		4.17	□□□□□ -1.74
ALMS1-205	ENST00000490821		Q8NDZ9	215 aa		4.17	□□□□□ -1.74
ALMS1-205	ENST00000490821	KRTAP9-8	Q9BYQ0	159 aa		4.17	□□□□□ -1.74
ALMS1-205	ENST00000490821	VCX2	Q9H322	139 aa		4.17	□□□□□ -1.74
ALMS1-205	ENST00000490821	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.17	□□□□□ -1.74
ALMS1-205	ENST00000490821	SMIM1	B2RUZ4	78 aa		4.16	□□□□□ -1.74
ALMS1-205	ENST00000490821	RAB5A	P20339	215 aa		4.16	□□□□□ -1.74
ALMS1-205	ENST00000490821	HERVK_113	P63121	156 aa		4.16	□□□□□ -1.74
ALMS1-205	ENST00000490821	LINC00483	Q53H64	154 aa		4.16	□□□□□ -1.74
ALMS1-205	ENST00000490821	NAT8B	Q9UHF3	227 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms