RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 LPAP08519 4548 aa5.62□□□□□ -1.51
SUPT20H-220ENST00000490716 FAM168BA1KXE4 195 aa5.62□□□□□ -1.51
SUPT20H-220ENST00000490716 KRTAP13-1Q8IUC0 172 aa5.62□□□□□ -1.51
SUPT20H-220ENST00000490716 Q8NDZ9 215 aa5.62□□□□□ -1.51
SUPT20H-220ENST00000490716 SMCO4Q9NRQ5 59 aa5.62□□□□□ -1.51
SUPT20H-220ENST00000490716 NDUFC2-KCTD14E9PQ53 114 aa5.61□□□□□ -1.51
SUPT20H-220ENST00000490716 C2orf82Q6UX34 121 aa5.61□□□□□ -1.51
SUPT20H-220ENST00000490716 Q6ZN92 141 aa5.61□□□□□ -1.51
SUPT20H-220ENST00000490716 LINC01600Q96MT4 127 aa5.61□□□□□ -1.51
SUPT20H-220ENST00000490716 VCX2Q9H322 139 aa5.61□□□□□ -1.51
SUPT20H-220ENST00000490716 PKIGQ9Y2B9 76 aa5.61□□□□□ -1.51
SUPT20H-220ENST00000490716 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
SUPT20H-220ENST00000490716 HBDP02042 147 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 STPG4Q8N801 248 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 C2orf88Q9BSF0 95 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 PMCHL1Q16048 86 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 ZNF561-AS1K7EIQ3 104 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 SEC11AP67812 179 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 NDUFA5Q16718 116 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 CAMK2N2Q96S95 79 aa5.6□□□□□ -1.51
SUPT20H-220ENST00000490716 NDUFA1O15239 70 aa5.59□□□□□ -1.51
SUPT20H-220ENST00000490716 TRGC2P03986 189 aa5.59□□□□□ -1.51
SUPT20H-220ENST00000490716 COA6Q5JTJ3 125 aaKnown RBP5.59□□□□□ -1.51
SUPT20H-220ENST00000490716 LOC107984156A0A0G2JMH3 177 aa5.59□□□□□ -1.51
SUPT20H-220ENST00000490716 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
SUPT20H-220ENST00000490716 PAPPA-AS1Q5QFB9 102 aa5.59□□□□□ -1.51
SUPT20H-220ENST00000490716 SERTAD4-AS1Q5TG53 156 aa5.59□□□□□ -1.51
SUPT20H-220ENST00000490716 ARL17AQ8IVW1 177 aa5.59□□□□□ -1.51
SUPT20H-220ENST00000490716 TMEM223A0PJW6 202 aa5.58□□□□□ -1.52
SUPT20H-220ENST00000490716 C11orf86A6NJI1 115 aa5.58□□□□□ -1.52
SUPT20H-220ENST00000490716 MALP21145 153 aa5.58□□□□□ -1.52
SUPT20H-220ENST00000490716 MAJINQ3KP22 176 aa5.58□□□□□ -1.52
SUPT20H-220ENST00000490716 TP73-AS1Q9UF72 201 aa5.58□□□□□ -1.52
SUPT20H-220ENST00000490716 F8VRH5 84 aa5.58□□□□□ -1.52
SUPT20H-220ENST00000490716 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
SUPT20H-220ENST00000490716 SPINK6Q6UWN8 80 aa5.57□□□□□ -1.52
SUPT20H-220ENST00000490716 CXCL5P42830 114 aa5.57□□□□□ -1.52
SUPT20H-220ENST00000490716 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
SUPT20H-220ENST00000490716 LRP2P98164 4655 aa5.56□□□□□ -1.52
SUPT20H-220ENST00000490716 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
SUPT20H-220ENST00000490716 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
SUPT20H-220ENST00000490716 FLG2Q5D862 2391 aaPredicted RBP5.56□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BKO60814 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BJP06899 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BOP23527 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BBP33778 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BDP58876 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 RAB5BP61020 215 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BCP62807 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST2H2BEQ16778 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BHQ93079 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BNQ99877 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 HIST1H2BMQ99879 126 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 PACRGQ96M98 296 aaPredicted RBP5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 SERF1AO75920 110 aa5.55□□□□□ -1.52
SUPT20H-220ENST00000490716 IGKV2-24A0A0C4DH68 120 aa5.54□□□□□ -1.52
SUPT20H-220ENST00000490716 ATP5LO75964 103 aa5.54□□□□□ -1.52
SUPT20H-220ENST00000490716 COX17Q14061 63 aa5.54□□□□□ -1.52
SUPT20H-220ENST00000490716 SPINK8P0C7L1 97 aa5.54□□□□□ -1.52
SUPT20H-220ENST00000490716 TSPEAR-AS2P59090 65 aa5.53□□□□□ -1.52
SUPT20H-220ENST00000490716 SCO1O75880 301 aa5.53□□□□□ -1.52
SUPT20H-220ENST00000490716 VPREB1P12018 145 aa5.53□□□□□ -1.52
SUPT20H-220ENST00000490716 KRTAP4-16G5E9R7 235 aaPredicted RBP5.53□□□□□ -1.52
SUPT20H-220ENST00000490716 IFI27L1Q96BM0 104 aa5.52□□□□□ -1.53
SUPT20H-220ENST00000490716 IGLV7-43P04211 117 aa5.52□□□□□ -1.53
SUPT20H-220ENST00000490716 DMBT1Q9UGM3 2413 aaPredicted RBP5.52□□□□□ -1.53
SUPT20H-220ENST00000490716 GAGE2BQ13066 116 aa5.52□□□□□ -1.53
SUPT20H-220ENST00000490716 FAM19A2Q8N3H0 131 aa5.52□□□□□ -1.53
SUPT20H-220ENST00000490716 LINC00469Q8N7U9 141 aa5.51□□□□□ -1.53
SUPT20H-220ENST00000490716 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
SUPT20H-220ENST00000490716 RPL18AQ02543 176 aaKnown RBP5.51□□□□□ -1.53
SUPT20H-220ENST00000490716 BAGE3Q86Y29 109 aa5.51□□□□□ -1.53
SUPT20H-220ENST00000490716 PRSS2P07478 247 aa5.5□□□□□ -1.53
SUPT20H-220ENST00000490716 C7orf33Q8WU49 177 aa5.5□□□□□ -1.53
SUPT20H-220ENST00000490716 LITAFQ99732 161 aa5.5□□□□□ -1.53
SUPT20H-220ENST00000490716 CHTOPQ9Y3Y2 248 aaKnown RBP5.5□□□□□ -1.53
SUPT20H-220ENST00000490716 SPRR1AP35321 89 aa5.5□□□□□ -1.53
SUPT20H-220ENST00000490716 H0Y9J4 135 aa5.49□□□□□ -1.53
SUPT20H-220ENST00000490716 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
SUPT20H-220ENST00000490716 LINC01545Q5VT33 79 aa5.49□□□□□ -1.53
SUPT20H-220ENST00000490716 SFTA2Q6UW10 78 aa5.49□□□□□ -1.53
SUPT20H-220ENST00000490716 SND1-IT1Q9HBX3 110 aa5.49□□□□□ -1.53
SUPT20H-220ENST00000490716 IGLV1-50A0A075B6I6 118 aa5.49□□□□□ -1.53
SUPT20H-220ENST00000490716 M0QXV9 152 aa5.48□□□□□ -1.53
SUPT20H-220ENST00000490716 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
SUPT20H-220ENST00000490716 ERG28Q9UKR5 140 aa5.47□□□□□ -1.53
SUPT20H-220ENST00000490716 H3BRM9 83 aa5.47□□□□□ -1.53
SUPT20H-220ENST00000490716 MRPL55Q7Z7F7 128 aaKnown RBP5.47□□□□□ -1.53
SUPT20H-220ENST00000490716 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
SUPT20H-220ENST00000490716 PPDPFQ9H3Y8 114 aa5.47□□□□□ -1.53
SUPT20H-220ENST00000490716 FAM19A5Q7Z5A7 132 aaPredicted RBP5.46□□□□□ -1.53
SUPT20H-220ENST00000490716 CKS1BP61024 79 aa5.46□□□□□ -1.54
SUPT20H-220ENST00000490716 GAGE2EQ4V326 116 aa5.46□□□□□ -1.54
SUPT20H-220ENST00000490716 GAGE2DQ9UEU5 116 aa5.46□□□□□ -1.54
SUPT20H-220ENST00000490716 RNF213Q63HN8 5207 aa5.46□□□□□ -1.54
SUPT20H-220ENST00000490716 LEPROTO15243 131 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms