RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 BSPH1Q075Z2 132 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 FAM229BQ4G0N7 80 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 C11orf72Q8NBR9 251 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 BOD1L1Q8NFC6 3051 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 SPENQ96T58 3664 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 PTPN13Q12923 2485 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 POLEQ07864 2286 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 LOC110117498A0A087WWA1 95 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 TMEM89A2RUT3 159 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 G3V318 75 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 PDE6GP18545 87 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 KRTAP1-1Q07627 177 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 Q1T7F1 81 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 Q6ZTC4 211 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 TMEM254Q8TBM7 123 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 FAM215AQ9Y5M1 114 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 BSNQ9UPA5 3926 aa3.36□□□□□ -1.87
SNRNP40-206ENST00000489853 ROS1P08922 2347 aa3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 PTPRQQ9UMZ3 2332 aa3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 A0A1W2PNU3 283 aaPredicted RBP3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 LY6G6DO95868 133 aa3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 FUSP35637 526 aaKnown RBP eCLIP3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 CCL18P55774 89 aa3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 ATP1A1-AS1Q5TC04 95 aa3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 Q8N814 137 aa3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 RHPN1-AS1Q9BWJ2 59 aa3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 SPTA1P02549 2419 aa3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 TEP1Q99973 2627 aaKnown RBP3.35□□□□□ -1.87
SNRNP40-206ENST00000489853 TRBV6-4A0A1B0GX49 114 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 PLA2G2AP14555 144 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 PROK1P58294 105 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 LINC00158P58513 81 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 DAD1P61803 113 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 HAMPP81172 84 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 Q6ZQT0 140 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 Q6ZTI0 123 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 LINC01560Q8TB33 94 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 TM2D3Q9BRN9 247 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 C11orf68Q9H3H3 251 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 CSMD1Q96PZ7 3565 aa3.34□□□□□ -1.87
SNRNP40-206ENST00000489853 IGHV3-73A0A0B4J1V6 119 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 E7EQL1 145 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 LYNX1G3V0Z9 82 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 LYNX1P0DP58 116 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 NREPQ16612 68 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 Q6YL49 198 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 Q6ZVQ6 151 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 ZNF843Q8N446 348 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 FDCSPQ8NFU4 85 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 COX7B2Q8TF08 81 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 USMG5Q96IX5 58 aa3.34□□□□□ -1.88
SNRNP40-206ENST00000489853 IGKV3-7A0A075B6H7 116 aa3.33□□□□□ -1.88
SNRNP40-206ENST00000489853 H3BQ85 93 aa3.33□□□□□ -1.88
SNRNP40-206ENST00000489853 K7EMT4 169 aa3.33□□□□□ -1.88
SNRNP40-206ENST00000489853 K7EQD1 137 aa3.33□□□□□ -1.88
SNRNP40-206ENST00000489853 IGHV3-53P01767 116 aa3.33□□□□□ -1.88
SNRNP40-206ENST00000489853 hDV103S1A0JD37 113 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 BPY2O14599 106 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 C6orf223Q8N319 242 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 Q9UF83 564 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 ANKRD17O75179 2603 aaKnown RBP3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 PKDREJQ9NTG1 2253 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 A0A087WZ39 114 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 TRBV10-1A0A0K0K1A3 114 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 K7EQG2 157 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 C9orf66Q5T8R8 295 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 NTM-AS1Q6ZSK4 140 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 LINC00476Q8WZB0 136 aa3.32□□□□□ -1.88
SNRNP40-206ENST00000489853 H3BUA1 57 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 GNLYP22749 145 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 SPINK13Q1W4C9 94 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 C5orf56Q8N8D9 126 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 ITPR2Q14571 2701 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 MED13LQ71F56 2210 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 USP9YO00507 2555 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 A0A096LNT2 108 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 IGKV3-20P01619 116 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 IGHV4-38-2P0DP08 117 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 VPREB1P12018 145 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 Q6ZRP5 223 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 OCR1Q9BZK8 76 aa3.31□□□□□ -1.88
SNRNP40-206ENST00000489853 LRBAP50851 2863 aa3.3□□□□□ -1.88
SNRNP40-206ENST00000489853 LRRK2Q5S007 2527 aa3.3□□□□□ -1.88
SNRNP40-206ENST00000489853 RP1L1Q8IWN7 2480 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-206ENST00000489853 MYO9AB2RTY4 2548 aa3.3□□□□□ -1.88
SNRNP40-206ENST00000489853 COL6A6A6NMZ7 2263 aa3.3□□□□□ -1.88
SNRNP40-206ENST00000489853 NOTCH2Q04721 2471 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 NANOS2P60321 138 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 LINC00575Q6W349 94 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 KRTAP3-1Q9BYR8 98 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 TOMM7Q9P0U1 55 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 RBM12B-AS1Q9P1G2 102 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 CENPEQ02224 2701 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 TLN1Q9Y490 2541 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 PCNX1Q96RV3 2341 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 M0R2N4 97 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms