RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 RPL7P18124 248 aaKnown RBP0.88□□□□□ -2.27
NEK2-204ENST00000489633 CMPK1P30085 196 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 SDC4P31431 198 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 CKS2P33552 79 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 FXYD6P3P58550 94 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 SMCO1Q147U7 214 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 DEFB135Q30KP9 77 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 TCTEX1D1Q8N7M0 179 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 OR8J3Q8NGG0 315 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 C10orf82Q8WW14 230 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 CLEC2BQ92478 149 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 AMELYQ99218 206 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 JPT1Q9UK76 154 aa0.88□□□□□ -2.27
NEK2-204ENST00000489633 SNRNP200O75643 2136 aaKnown RBP0.88□□□□□ -2.27
NEK2-204ENST00000489633 DEFB131BA0A096LNP1 70 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 C3orf85A0A1B0GTC6 90 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 A0A1W2PPM0 123 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 A6NN06 94 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 NCR3O14931 201 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 OR2H2O95918 312 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 IGLV3-1P01715 115 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 GYPBP06028 91 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 PAEPP09466 180 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 ZNF25P17030 456 aaPredicted RBP0.87□□□□□ -2.27
NEK2-204ENST00000489633 QRFPP83859 136 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 OR8B8Q15620 311 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 HSD17B12Q53GQ0 312 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 TMEM14EPQ6UXP3 125 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 LINC00269Q8N2A0 174 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 C10orf111Q8N326 155 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 PPP1R1CQ8WVI7 109 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 CARD19Q96LW7 228 aa0.87□□□□□ -2.27
NEK2-204ENST00000489633 C9orf170A2RU37 121 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 PPYP01298 95 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 IGHV3-30P01768 117 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 MT2AP02795 61 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 MT1FP04733 61 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 IGHV3-30-5P0DP03 117 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 RPS3P23396 243 aaKnown RBP eCLIP0.86□□□□□ -2.27
NEK2-204ENST00000489633 S100A12P80511 92 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 MIR22HGQ0VDD5 57 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 HRCT1Q6UXD1 115 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 VMO1Q7Z5L0 202 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 ATOH7Q8N100 152 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 Q8TAT8 98 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 BRK1Q8WUW1 75 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 OBSCN-AS1Q96MR7 158 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 METTL1Q9UBP6 276 aaKnown RBP0.86□□□□□ -2.27
NEK2-204ENST00000489633 DSPPQ9NZW4 1301 aa0.86□□□□□ -2.27
NEK2-204ENST00000489633 IGHV1-24A0A0C4DH33 117 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 C9JAW5 83 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 M0QZK8 103 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 NCR2O95944 276 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 APOC1P02654 83 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 TFF1P04155 84 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 EVI2AP22794 236 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 FOXA3P55318 350 aaPredicted RBP0.85□□□□□ -2.27
NEK2-204ENST00000489633 PCBD1P61457 104 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 NCS1P62166 190 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 INSL4Q14641 139 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 NEDD8Q15843 81 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 IDO2Q6ZQW0 420 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 DEFB106AQ8N104 65 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 PPDPFLQ8WWR9 84 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 MAFIPQ8WZ33 124 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 PFDN5Q99471 154 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 SAR1AQ9NR31 198 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 TAS2R8Q9NYW2 309 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 COPZ2Q9P299 210 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 HIGD1AQ9Y241 93 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 TANC2Q9HCD6 1990 aa0.85□□□□□ -2.27
NEK2-204ENST00000489633 EDF1O60869 148 aaKnown RBP0.84□□□□□ -2.27
NEK2-204ENST00000489633 SLC25A4P12235 298 aa0.84□□□□□ -2.27
NEK2-204ENST00000489633 HLA-DRB4P13762 266 aa0.84□□□□□ -2.27
NEK2-204ENST00000489633 KDELR1P24390 212 aa0.84□□□□□ -2.27
NEK2-204ENST00000489633 ZNF720Q7Z2F6 126 aa0.84□□□□□ -2.27
NEK2-204ENST00000489633 ZC2HC1AQ96GY0 325 aa0.84□□□□□ -2.27
NEK2-204ENST00000489633 HLA-DRB4X5D2U9 266 aa0.84□□□□□ -2.27
NEK2-204ENST00000489633 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.27
NEK2-204ENST00000489633 TRAV23DV6A0A075B6W5 121 aa0.83□□□□□ -2.28
NEK2-204ENST00000489633 CDC42EP2O14613 210 aa0.83□□□□□ -2.28
NEK2-204ENST00000489633 PDE6GP18545 87 aa0.83□□□□□ -2.28
NEK2-204ENST00000489633 SARNPP82979 210 aaKnown RBP0.83□□□□□ -2.28
NEK2-204ENST00000489633 RHOHQ15669 191 aa0.83□□□□□ -2.28
NEK2-204ENST00000489633 TMEM91Q6ZNR0 172 aa0.83□□□□□ -2.28
NEK2-204ENST00000489633 DMAC1Q96GE9 116 aa0.83□□□□□ -2.28
NEK2-204ENST00000489633 SLC35B3Q9H1N7 401 aa0.83□□□□□ -2.28
NEK2-204ENST00000489633 TMEM30CPA0ZSE6 113 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 HIGD1CA8MV81 97 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 CCDC179H3BU77 68 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 M0R2Z0 102 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 TPST1O60507 370 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 TCRAP04437 139 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 SLC25A5P05141 298 aaKnown RBP0.82□□□□□ -2.28
NEK2-204ENST00000489633 ARPC4P59998 168 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 SNRPD3P62318 126 aaKnown RBP0.82□□□□□ -2.28
NEK2-204ENST00000489633 TMEM244Q5VVB8 128 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 UNQ5815/PRO19632Q6UWF5 114 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 Q6ZQY7 126 aa0.82□□□□□ -2.28
NEK2-204ENST00000489633 ATP6V0E2Q8NHE4 81 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms