RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 NBEAL1Q6ZS30 2694 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 IGHV4-4A0A075B6R2 117 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 A0A0J9YX75 114 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 PMAIP1Q13794 54 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 KRTAP24-1Q3LI83 254 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 C19orf73Q9NVV2 129 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 TRRAPQ9Y4A5 3859 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 VCYO14598 125 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 DEFB1P60022 68 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 SPATA3Q8NHX4 192 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 RMI2Q96E14 147 aa7.01□□□□□ -1.29
NOD1-208ENST00000489614 TRBV7-6A0A0J9YX20 115 aa7.01□□□□□ -1.29
NOD1-208ENST00000489614 RPL11P62913 178 aaKnown RBP7.01□□□□□ -1.29
NOD1-208ENST00000489614 EPM2AB3EWF7 344 aa7□□□□□ -1.29
NOD1-208ENST00000489614 ENHOQ6UWT2 76 aa7□□□□□ -1.29
NOD1-208ENST00000489614 F8WEM9 126 aa7□□□□□ -1.29
NOD1-208ENST00000489614 CCKP06307 115 aa7□□□□□ -1.29
NOD1-208ENST00000489614 C6orf226Q5I0X4 101 aa7□□□□□ -1.29
NOD1-208ENST00000489614 KHDC1LQ5JSQ8 128 aa7□□□□□ -1.29
NOD1-208ENST00000489614 NCR3O14931 201 aa6.99□□□□□ -1.29
NOD1-208ENST00000489614 SNRPD3P62318 126 aaKnown RBP6.99□□□□□ -1.29
NOD1-208ENST00000489614 MAP6D1Q9H9H5 199 aa6.99□□□□□ -1.29
NOD1-208ENST00000489614 TRBV27A0A0K0K1C4 114 aa6.99□□□□□ -1.29
NOD1-208ENST00000489614 POLR2KP53803 58 aaKnown RBP6.99□□□□□ -1.29
NOD1-208ENST00000489614 SUMO4Q6EEV6 95 aa6.99□□□□□ -1.29
NOD1-208ENST00000489614 VWFP04275 2813 aa6.99□□□□□ -1.29
NOD1-208ENST00000489614 F6UB75 175 aa6.99□□□□□ -1.29
NOD1-208ENST00000489614 ODF3L2Q3SX64 289 aa6.99□□□□□ -1.29
NOD1-208ENST00000489614 PPP1R17O96001 155 aa6.98□□□□□ -1.29
NOD1-208ENST00000489614 LINC00467Q9BRT7 94 aa6.98□□□□□ -1.29
NOD1-208ENST00000489614 RNASE4P34096 147 aaKnown RBP6.97□□□□□ -1.29
NOD1-208ENST00000489614 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
NOD1-208ENST00000489614 IGLV4-3A0A075B6K6 122 aa6.96□□□□□ -1.29
NOD1-208ENST00000489614 MED14OSP0DP75 135 aa6.96□□□□□ -1.29
NOD1-208ENST00000489614 FAM229BQ4G0N7 80 aa6.96□□□□□ -1.29
NOD1-208ENST00000489614 MUC4Q99102 2169 aa6.96□□□□□ -1.3
NOD1-208ENST00000489614 SLPIP03973 132 aa6.96□□□□□ -1.3
NOD1-208ENST00000489614 LINC00308Q8TCZ7 52 aa6.95□□□□□ -1.3
NOD1-208ENST00000489614 A0A087WZ39 114 aa6.95□□□□□ -1.3
NOD1-208ENST00000489614 VSIG2Q96IQ7 327 aa6.95□□□□□ -1.3
NOD1-208ENST00000489614 LINC00315P59091 139 aa6.95□□□□□ -1.3
NOD1-208ENST00000489614 FAM222AQ5U5X8 452 aa6.95□□□□□ -1.3
NOD1-208ENST00000489614 GIG44P09565 113 aaPredicted RBP6.94□□□□□ -1.3
NOD1-208ENST00000489614 MGAM2Q2M2H8 2515 aa6.94□□□□□ -1.3
NOD1-208ENST00000489614 IGKV3-7A0A075B6H7 116 aa6.94□□□□□ -1.3
NOD1-208ENST00000489614 A0A087WYN8 130 aa6.94□□□□□ -1.3
NOD1-208ENST00000489614 RNASE3P12724 160 aaKnown RBP6.94□□□□□ -1.3
NOD1-208ENST00000489614 DYNLRB2Q8TF09 96 aa6.94□□□□□ -1.3
NOD1-208ENST00000489614 TRAV21A0A0B4J279 112 aa6.93□□□□□ -1.3
NOD1-208ENST00000489614 DEFB131AP59861 70 aa6.93□□□□□ -1.3
NOD1-208ENST00000489614 C20orf203Q8NBC4 194 aa6.93□□□□□ -1.3
NOD1-208ENST00000489614 NOTCH1P46531 2555 aa6.93□□□□□ -1.3
NOD1-208ENST00000489614 PAX4O43316 350 aa6.92□□□□□ -1.3
NOD1-208ENST00000489614 CMC4P56277 68 aaPredicted RBP6.92□□□□□ -1.3
NOD1-208ENST00000489614 PIK3CD-AS1Q5SR53 167 aa6.92□□□□□ -1.3
NOD1-208ENST00000489614 Q9H8V8 135 aa6.92□□□□□ -1.3
NOD1-208ENST00000489614 KIF25-AS1Q9Y6Z4 181 aa6.92□□□□□ -1.3
NOD1-208ENST00000489614 C9orf66Q5T8R8 295 aa6.91□□□□□ -1.3
NOD1-208ENST00000489614 CSNK1G2-AS1Q8NCQ2 148 aa6.91□□□□□ -1.3
NOD1-208ENST00000489614 LRCOL1A6NCL2 159 aa6.91□□□□□ -1.3
NOD1-208ENST00000489614 MRPS36P82909 103 aaKnown RBP6.91□□□□□ -1.3
NOD1-208ENST00000489614 TRAV10A0A0B4J240 114 aa6.9□□□□□ -1.3
NOD1-208ENST00000489614 EGFEM1PQ0D2K5 195 aa6.9□□□□□ -1.3
NOD1-208ENST00000489614 LECT2O14960 151 aa6.9□□□□□ -1.3
NOD1-208ENST00000489614 MIR7-3HGQ8N6C7 128 aa6.9□□□□□ -1.3
NOD1-208ENST00000489614 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
NOD1-208ENST00000489614 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
NOD1-208ENST00000489614 DYNC2H1Q8NCM8 4307 aaKnown RBP6.9□□□□□ -1.31
NOD1-208ENST00000489614 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.31
NOD1-208ENST00000489614 HUWE1Q7Z6Z7 4374 aaKnown RBP6.89□□□□□ -1.31
NOD1-208ENST00000489614 TRAV7A0A075B6U4 112 aa6.89□□□□□ -1.31
NOD1-208ENST00000489614 C11orf72Q8NBR9 251 aa6.89□□□□□ -1.31
NOD1-208ENST00000489614 IGHV3-73A0A0B4J1V6 119 aa6.88□□□□□ -1.31
NOD1-208ENST00000489614 PF4P02776 101 aa6.88□□□□□ -1.31
NOD1-208ENST00000489614 IGHV1OR15-1A0A075B7D0 117 aa6.88□□□□□ -1.31
NOD1-208ENST00000489614 KLKP1Q107X0 134 aa6.88□□□□□ -1.31
NOD1-208ENST00000489614 SPINK13Q1W4C9 94 aa6.88□□□□□ -1.31
NOD1-208ENST00000489614 C1orf158Q8N1D5 194 aa6.88□□□□□ -1.31
NOD1-208ENST00000489614 DNAH9Q9NYC9 4486 aa6.87□□□□□ -1.31
NOD1-208ENST00000489614 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
NOD1-208ENST00000489614 M0QY20 66 aa6.87□□□□□ -1.31
NOD1-208ENST00000489614 RPL36AP83881 106 aaKnown RBP6.87□□□□□ -1.31
NOD1-208ENST00000489614 CD164Q04900 197 aa6.87□□□□□ -1.31
NOD1-208ENST00000489614 Q6ZTI0 123 aa6.87□□□□□ -1.31
NOD1-208ENST00000489614 RPL36ALQ969Q0 106 aaKnown RBP6.87□□□□□ -1.31
NOD1-208ENST00000489614 PLAC8L1A1L4L8 177 aa6.86□□□□□ -1.31
NOD1-208ENST00000489614 DAD1P61803 113 aa6.86□□□□□ -1.31
NOD1-208ENST00000489614 HAMPP81172 84 aa6.86□□□□□ -1.31
NOD1-208ENST00000489614 FAM104AQ969W3 186 aa6.86□□□□□ -1.31
NOD1-208ENST00000489614 WFDC10AQ9H1F0 79 aa6.86□□□□□ -1.31
NOD1-208ENST00000489614 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
NOD1-208ENST00000489614 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
NOD1-208ENST00000489614 CRPP02741 224 aa6.85□□□□□ -1.31
NOD1-208ENST00000489614 NDUFA1O15239 70 aa6.85□□□□□ -1.31
NOD1-208ENST00000489614 C4orf48Q5BLP8 95 aa6.85□□□□□ -1.31
NOD1-208ENST00000489614 PKD1L1Q8TDX9 2849 aa6.85□□□□□ -1.31
NOD1-208ENST00000489614 KRTAP10-11P60412 298 aa6.85□□□□□ -1.31
NOD1-208ENST00000489614 SMIM11BQ8TCY0 68 aa6.85□□□□□ -1.31
NOD1-208ENST00000489614 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms