RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 LINC00269Q8N2A0 174 aa6.99□□□□□ -1.29
SCAMP4-208ENST00000489554 KLK12Q9UKR0 248 aa6.99□□□□□ -1.29
SCAMP4-208ENST00000489554 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 CCL25O15444 150 aa6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 ANGP03950 147 aaKnown RBP6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 ZNF22P17026 224 aaPredicted RBP6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 UBE2D1P51668 147 aa6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 KRTAP10-1P60331 282 aa6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 KRTAP26-1Q6PEX3 210 aa6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 CLPSL2Q6UWE3 100 aa6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 HIST1H4GQ99525 98 aa6.98□□□□□ -1.29
SCAMP4-208ENST00000489554 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
SCAMP4-208ENST00000489554 LINC00959A0A1B0GUT2 108 aa6.97□□□□□ -1.29
SCAMP4-208ENST00000489554 SMIM13P0DJ93 91 aa6.97□□□□□ -1.29
SCAMP4-208ENST00000489554 REG3AQ06141 175 aa6.97□□□□□ -1.29
SCAMP4-208ENST00000489554 SRSF9Q13242 221 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCAMP4-208ENST00000489554 CEND1Q8N111 149 aa6.97□□□□□ -1.29
SCAMP4-208ENST00000489554 SPANXB1Q9NS25 103 aaPredicted RBP6.97□□□□□ -1.29
SCAMP4-208ENST00000489554 ABCA13Q86UQ4 5058 aa6.97□□□□□ -1.29
SCAMP4-208ENST00000489554 IGKV2D-24A0A075B6R9 120 aa6.96□□□□□ -1.3
SCAMP4-208ENST00000489554 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.3
SCAMP4-208ENST00000489554 XGP55808 180 aa6.96□□□□□ -1.3
SCAMP4-208ENST00000489554 Q6ZVH6 145 aa6.96□□□□□ -1.3
SCAMP4-208ENST00000489554 LINC00469Q8N7U9 141 aa6.96□□□□□ -1.3
SCAMP4-208ENST00000489554 COPS9Q8WXC6 57 aa6.96□□□□□ -1.3
SCAMP4-208ENST00000489554 UBE2WQ96B02 151 aa6.96□□□□□ -1.3
SCAMP4-208ENST00000489554 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
SCAMP4-208ENST00000489554 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
SCAMP4-208ENST00000489554 TRAV13-1A0A0B4J241 112 aa6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 IGKV3OR2-268A0A0C4DH90 116 aa6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 CRPP02741 224 aa6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 COX6A2Q02221 97 aa6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 CIRBPQ14011 172 aaKnown RBP6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 WFDC2Q14508 124 aa6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 SFTA2Q6UW10 78 aa6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 TP73-AS1Q9UF72 201 aa6.94□□□□□ -1.3
SCAMP4-208ENST00000489554 IGLV10-54A0A075B6I4 117 aa6.93□□□□□ -1.3
SCAMP4-208ENST00000489554 LECT2O14960 151 aa6.93□□□□□ -1.3
SCAMP4-208ENST00000489554 MIAQ16674 131 aa6.93□□□□□ -1.3
SCAMP4-208ENST00000489554 CHCHD10Q8WYQ3 142 aaPredicted RBP6.93□□□□□ -1.3
SCAMP4-208ENST00000489554 C1orf43Q9BWL3 253 aa6.93□□□□□ -1.3
SCAMP4-208ENST00000489554 IGHV3OR16-9A0A0B4J2B5 98 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 C9orf118A6NHY6 69 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 TAX1BP3O14907 124 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 TIMM17BO60830 172 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 HERV-K104P63124 156 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 RPL24P83731 157 aaKnown RBP6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 FOXI1Q12951 378 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 VAMP3Q15836 100 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 GTF2H5Q6ZYL4 71 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 LINC01561Q8N1V8 128 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
SCAMP4-208ENST00000489554 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.91□□□□□ -1.3
SCAMP4-208ENST00000489554 TRAV8-4A0A0B4J246 113 aa6.91□□□□□ -1.3
SCAMP4-208ENST00000489554 SS18Q15532 418 aa6.91□□□□□ -1.3
SCAMP4-208ENST00000489554 C14orf177Q52M58 125 aa6.91□□□□□ -1.3
SCAMP4-208ENST00000489554 NDUFA12Q9UI09 145 aa6.91□□□□□ -1.3
SCAMP4-208ENST00000489554 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 A0A0J9YXY3 114 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 IFITM1P13164 125 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 XCL1P47992 114 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 UBE2V1Q13404 147 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 Q5VSD8 79 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 CD164L2Q6UWJ8 174 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
SCAMP4-208ENST00000489554 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
SCAMP4-208ENST00000489554 NDUFA1O15239 70 aa6.89□□□□□ -1.31
SCAMP4-208ENST00000489554 SPINK8P0C7L1 97 aa6.89□□□□□ -1.31
SCAMP4-208ENST00000489554 FABP2P12104 132 aa6.89□□□□□ -1.31
SCAMP4-208ENST00000489554 FXYD2P54710 66 aa6.89□□□□□ -1.31
SCAMP4-208ENST00000489554 Q6ZSA8 131 aa6.89□□□□□ -1.31
SCAMP4-208ENST00000489554 NHP2Q9NX24 153 aaKnown RBP6.89□□□□□ -1.31
SCAMP4-208ENST00000489554 A0A087WZ39 114 aa6.88□□□□□ -1.31
SCAMP4-208ENST00000489554 A0A1B0GWB2 263 aa6.88□□□□□ -1.31
SCAMP4-208ENST00000489554 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
SCAMP4-208ENST00000489554 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
SCAMP4-208ENST00000489554 SPANXDQ9BXN6 97 aa6.88□□□□□ -1.31
SCAMP4-208ENST00000489554 SPANXCQ9NY87 97 aa6.88□□□□□ -1.31
SCAMP4-208ENST00000489554 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
SCAMP4-208ENST00000489554 IGHV3-64A0A075B6Q5 118 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 GAGE10A6NGK3 116 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 TSPEAR-AS2P59090 65 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 HAMPP81172 84 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 C5orf38Q86SI9 138 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 PPDPFQ9H3Y8 114 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 DNAH8Q96JB1 4490 aa6.87□□□□□ -1.31
SCAMP4-208ENST00000489554 FAT1Q14517 4588 aa6.86□□□□□ -1.31
SCAMP4-208ENST00000489554 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
SCAMP4-208ENST00000489554 INAFM2P0DMQ5 153 aa6.86□□□□□ -1.31
SCAMP4-208ENST00000489554 A0A1W2PPM0 123 aa6.85□□□□□ -1.31
SCAMP4-208ENST00000489554 H3BUT2 72 aa6.85□□□□□ -1.31
SCAMP4-208ENST00000489554 COX7A2LO14548 114 aa6.85□□□□□ -1.31
SCAMP4-208ENST00000489554 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
SCAMP4-208ENST00000489554 RAB37Q96AX2 223 aa6.85□□□□□ -1.31
SCAMP4-208ENST00000489554 A0A0B4J2C4 111 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms