RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 OTOGLQ3ZCN5 2332 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 PTPRDP23468 1912 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 DMXL2Q8TDJ6 3036 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 HCG22E2RYF7 251 aa2.22□□□□□ -2.05
CCL20-204ENST00000489160 VMO1Q7Z5L0 202 aa2.22□□□□□ -2.05
CCL20-204ENST00000489160 HIGD1BQ9P298 99 aa2.22□□□□□ -2.05
CCL20-204ENST00000489160 PRO1854Q9UHT4 67 aa2.22□□□□□ -2.05
CCL20-204ENST00000489160 C2CD3Q4AC94 2353 aa2.22□□□□□ -2.05
CCL20-204ENST00000489160 DNHD1Q96M86 4753 aa2.22□□□□□ -2.05
CCL20-204ENST00000489160 COL5A1P20908 1838 aaPredicted RBP2.21□□□□□ -2.05
CCL20-204ENST00000489160 TSC2P49815 1807 aa2.21□□□□□ -2.05
CCL20-204ENST00000489160 CELSR3Q9NYQ7 3312 aa2.21□□□□□ -2.06
CCL20-204ENST00000489160 PRB1P04280 392 aa2.21□□□□□ -2.06
CCL20-204ENST00000489160 COX6CP09669 75 aa2.21□□□□□ -2.06
CCL20-204ENST00000489160 LYPD5Q6UWN5 251 aa2.21□□□□□ -2.06
CCL20-204ENST00000489160 SPTSSBQ8NFR3 76 aa2.21□□□□□ -2.06
CCL20-204ENST00000489160 MANBALQ9NQG1 85 aa2.21□□□□□ -2.06
CCL20-204ENST00000489160 SNURFQ9Y675 71 aa2.21□□□□□ -2.06
CCL20-204ENST00000489160 MYO18AQ92614 2054 aaKnown RBP2.21□□□□□ -2.06
CCL20-204ENST00000489160 TRBV7-3A0A075B6L6 115 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 TRAV23DV6A0A075B6W5 121 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 J3QKU1 62 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 UBE2D3P61077 147 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 CNBPP62633 177 aaKnown RBP2.2□□□□□ -2.06
CCL20-204ENST00000489160 UBE2D2P62837 147 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 ZCCHC23Q6ZST2 131 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 PATE1Q8WXA2 126 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 LIMD2Q9BT23 127 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 CYSTM1Q9H1C7 97 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 C22orf24Q9Y442 160 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 KALRNO60229 2985 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 ABCA2Q9BZC7 2435 aa2.2□□□□□ -2.06
CCL20-204ENST00000489160 A0A0G2JND7 137 aa2.19□□□□□ -2.06
CCL20-204ENST00000489160 EFNA4P52798 201 aa2.19□□□□□ -2.06
CCL20-204ENST00000489160 DEFB121Q5J5C9 76 aa2.19□□□□□ -2.06
CCL20-204ENST00000489160 ZNF818PQ6ZRF7 136 aa2.19□□□□□ -2.06
CCL20-204ENST00000489160 MPDZO75970 2070 aa2.19□□□□□ -2.06
CCL20-204ENST00000489160 UBR5O95071 2799 aaPredicted RBP2.19□□□□□ -2.06
CCL20-204ENST00000489160 TET1Q8NFU7 2136 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 PLXNA2O75051 1894 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 SPENQ96T58 3664 aaKnown RBP2.18□□□□□ -2.06
CCL20-204ENST00000489160 DOPEY2Q9Y3R5 2298 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 TRBV25-1A0A075B6N4 114 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 A0A0D9SFI3 127 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 TRBV6-4A0A1B0GX49 114 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 DNAL4O96015 105 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 HMGN2P05204 90 aaKnown RBP2.18□□□□□ -2.06
CCL20-204ENST00000489160 COX8AP10176 69 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 RNASE3P12724 160 aaKnown RBP2.18□□□□□ -2.06
CCL20-204ENST00000489160 ZNF56Q15929 161 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 XAF1Q6GPH4 301 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.18□□□□□ -2.06
CCL20-204ENST00000489160 Q6ZRN7 208 aaPredicted RBP2.18□□□□□ -2.06
CCL20-204ENST00000489160 C6orf201Q7Z4U5 140 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 Q8N6K4 173 aa2.18□□□□□ -2.06
CCL20-204ENST00000489160 CNOT1A5YKK6 2376 aaKnown RBP2.18□□□□□ -2.06
CCL20-204ENST00000489160 POLQO75417 2590 aa2.17□□□□□ -2.06
CCL20-204ENST00000489160 KIAA1549LQ6ZVL6 1849 aa2.17□□□□□ -2.06
CCL20-204ENST00000489160 DLG5Q8TDM6 1919 aa2.17□□□□□ -2.06
CCL20-204ENST00000489160 MYO7AQ13402 2215 aa2.17□□□□□ -2.06
CCL20-204ENST00000489160 DIDO1Q9BTC0 2240 aaKnown RBP2.17□□□□□ -2.06
CCL20-204ENST00000489160 CXorf51AA0A1B0GTR3 108 aa2.17□□□□□ -2.06
CCL20-204ENST00000489160 EDDM3BP56851 147 aa2.17□□□□□ -2.06
CCL20-204ENST00000489160 MUC22E2RYF6 1773 aaPredicted RBP2.17□□□□□ -2.06
CCL20-204ENST00000489160 UTP20O75691 2785 aaKnown RBP2.17□□□□□ -2.06
CCL20-204ENST00000489160 MICAL3Q7RTP6 2002 aa2.17□□□□□ -2.06
CCL20-204ENST00000489160 SCN3AQ9NY46 2000 aa2.17□□□□□ -2.06
CCL20-204ENST00000489160 SPTAN1Q13813 2472 aaKnown RBP2.16□□□□□ -2.06
CCL20-204ENST00000489160 NAV3Q8IVL0 2385 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 TRAV12-3A0A0B4J271 114 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 TRAV22A0A0B4J277 110 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 TRBV10-1A0A0K0K1A3 114 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 A0A1B0GWA3 101 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 TMEM30CPA0ZSE6 113 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 SNRPGP15A8MWD9 76 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 TMEM14DPA8MWL7 114 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 DEFB103AP81534 67 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 NUMA1Q14980 2115 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 C10orf128Q5T292 105 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 KRTAP26-1Q6PEX3 210 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 FAM223AQ8IWN6 122 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 TMEM14CQ9P0S9 112 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 V9GYH0 126 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 HEATR5BQ9P2D3 2071 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 LAMA1P25391 3075 aa2.16□□□□□ -2.06
CCL20-204ENST00000489160 RP1P56715 2156 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 CSMD1Q96PZ7 3565 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 MYMXA0A1B0GTQ4 84 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 LOC285095A0A1B0GVY8 99 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 CHKB-CPT1BH3BT56 60 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 FXYD1O00168 92 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 IGHV3-33P01772 117 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 SNRNP200O75643 2136 aaKnown RBP2.15□□□□□ -2.07
CCL20-204ENST00000489160 ZFHX3Q15911 3703 aa2.15□□□□□ -2.07
CCL20-204ENST00000489160 NF1P21359 2839 aa2.14□□□□□ -2.07
CCL20-204ENST00000489160 EXPH5Q8NEV8 1989 aa2.14□□□□□ -2.07
CCL20-204ENST00000489160 IGLV3-32A0A0A0MS00 114 aa2.14□□□□□ -2.07
CCL20-204ENST00000489160 ZNF815PA8K554 130 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms