RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 NDUFA1O15239 70 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 HERVK_113P63121 156 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 COX6A2Q02221 97 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 SPAG11BQ08648 103 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 FA2HQ7L5A8 372 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 LINC01561Q8N1V8 128 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 SPACA4Q8TDM5 124 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 C7orf33Q8WU49 177 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 TOMM6Q96B49 74 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 PACRGQ96M98 296 aaPredicted RBP3.26□□□□□ -1.89
SF3A3-207ENST00000488934 HERC1Q15751 4861 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 A0A087WZ39 114 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 LINC01546A6NGU7 62 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 RAB5BP61020 215 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 RPL37AP61513 92 aaKnown RBP3.25□□□□□ -1.89
SF3A3-207ENST00000488934 FABP9Q0Z7S8 132 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 KIAA1644Q3SXP7 199 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
SF3A3-207ENST00000488934 ERASQ7Z444 233 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 FAM19A3Q7Z5A8 133 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 C5orf38Q86SI9 138 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 ORAOV1Q8WV07 137 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 AMELXQ99217 191 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 OPRPNQ99935 248 aaPredicted RBP3.25□□□□□ -1.89
SF3A3-207ENST00000488934 ALKBH7Q9BT30 221 aaPredicted RBP3.25□□□□□ -1.89
SF3A3-207ENST00000488934 GEMIN7Q9H840 131 aaKnown RBP3.25□□□□□ -1.89
SF3A3-207ENST00000488934 MRPL35Q9NZE8 188 aaKnown RBP3.25□□□□□ -1.89
SF3A3-207ENST00000488934 TRAPPC1Q9Y5R8 145 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
SF3A3-207ENST00000488934 APOBP04114 4563 aaKnown RBP3.25□□□□□ -1.89
SF3A3-207ENST00000488934 IGKV2-24A0A0C4DH68 120 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 IGIPA6NJ69 53 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.24□□□□□ -1.89
SF3A3-207ENST00000488934 CXCL5P42830 114 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 UBE2D1P51668 147 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 MAJINQ3KP22 176 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 STPG4Q8N801 248 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 SCGB3A1Q96QR1 104 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 PLAC8Q9NZF1 115 aa3.24□□□□□ -1.89
SF3A3-207ENST00000488934 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 A0A096LNI7 61 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 TRBV30A0A0K0K1B3 111 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 CHTF8P0CG12 524 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 CFC1BP0CG36 223 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 CFC1P0CG37 223 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 CKS1BP61024 79 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 RPL18AQ02543 176 aaKnown RBP3.23□□□□□ -1.89
SF3A3-207ENST00000488934 Q6ZRU5 148 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 Q8IZM0 81 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 FAM104AQ969W3 186 aa3.23□□□□□ -1.89
SF3A3-207ENST00000488934 TINCRA0A1B0GVN0 87 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 H3BRM9 83 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 PANO1I0J062 215 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 ATP5LO75964 103 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 HBDP02042 147 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 LINC00614P0C842 121 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 TLX1NBP0CAT3 122 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 GAGE2BQ13066 116 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 PMVKQ15126 192 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 C6orf226Q5I0X4 101 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 LINC00173Q6ZV60 143 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 LINC00469Q8N7U9 141 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 C18orf32Q8TCD1 76 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 LINC00526Q96FQ7 95 aa3.22□□□□□ -1.89
SF3A3-207ENST00000488934 NDUFC2-KCTD14E9PQ53 114 aa3.21□□□□□ -1.9
SF3A3-207ENST00000488934 OXTP01178 125 aa3.21□□□□□ -1.9
SF3A3-207ENST00000488934 PDZD11Q5EBL8 140 aa3.21□□□□□ -1.9
SF3A3-207ENST00000488934 SFTA2Q6UW10 78 aa3.21□□□□□ -1.9
SF3A3-207ENST00000488934 CHCHD1Q96BP2 118 aaKnown RBP3.21□□□□□ -1.9
SF3A3-207ENST00000488934 TOMM7Q9P0U1 55 aa3.21□□□□□ -1.9
SF3A3-207ENST00000488934 CDKN2A-AS1Q9UH64 79 aa3.21□□□□□ -1.9
SF3A3-207ENST00000488934 A0A0J9YXV3 536 aa3.2□□□□□ -1.9
SF3A3-207ENST00000488934 F8VRH5 84 aa3.2□□□□□ -1.9
SF3A3-207ENST00000488934 LINC01547P58512 204 aaPredicted RBP3.2□□□□□ -1.9
SF3A3-207ENST00000488934 C9orf116Q5BN46 136 aaPredicted RBP3.2□□□□□ -1.9
SF3A3-207ENST00000488934 UNQ6190/PRO20217Q6UXQ8 127 aa3.2□□□□□ -1.9
SF3A3-207ENST00000488934 Q6ZRP5 223 aa3.2□□□□□ -1.9
SF3A3-207ENST00000488934 CST9LQ9H4G1 147 aa3.2□□□□□ -1.9
SF3A3-207ENST00000488934 C6orf48Q9UBA6 75 aa3.2□□□□□ -1.9
SF3A3-207ENST00000488934 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 HSBP1O75506 76 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 IGLC3P0DOY3 106 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 NDUFA6P56556 154 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
SF3A3-207ENST00000488934 PRR3P79522 188 aaKnown RBP3.19□□□□□ -1.9
SF3A3-207ENST00000488934 RPL24P83731 157 aaKnown RBP3.19□□□□□ -1.9
SF3A3-207ENST00000488934 KIAA0087Q14695 138 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 GAGE2EQ4V326 116 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 ZC2HC1BQ5TFG8 222 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 CBLN2Q8IUK8 224 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 COX7B2Q8TF08 81 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 YPEL4Q96NS1 127 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 GAGE2DQ9UEU5 116 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 VPS13BQ7Z7G8 4022 aa3.19□□□□□ -1.9
SF3A3-207ENST00000488934 FLG2Q5D862 2391 aaPredicted RBP3.19□□□□□ -1.9
SF3A3-207ENST00000488934 A0A096LNJ9 63 aa3.18□□□□□ -1.9
SF3A3-207ENST00000488934 TRAV12-1A0A0B4J245 112 aa3.18□□□□□ -1.9
SF3A3-207ENST00000488934 TMEM170BQ5T4T1 132 aa3.18□□□□□ -1.9
SF3A3-207ENST00000488934 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms